Jacob Rosenthal

ORCID: 0000-0002-1767-1826
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About
Contact & Profiles
Research Areas
  • Radiomics and Machine Learning in Medical Imaging
  • Cancer, Lipids, and Metabolism
  • AI in cancer detection
  • Metabolomics and Mass Spectrometry Studies
  • Machine Learning in Healthcare
  • Biomedical Text Mining and Ontologies
  • Prostate Cancer Treatment and Research
  • Law and Political Science
  • Philosophy, Science, and History
  • Probability and Statistical Research
  • Artificial Intelligence in Healthcare and Education
  • Genomics and Chromatin Dynamics
  • Philosophical Ethics and Theory
  • Cancer Genomics and Diagnostics
  • Machine Learning and Data Classification
  • Religion, Theology, and Education
  • Free Will and Agency
  • Tactile and Sensory Interactions
  • Epistemology, Ethics, and Metaphysics
  • Philosophy and History of Science
  • Explainable Artificial Intelligence (XAI)
  • Public Administration and Political Analysis
  • German Social Sciences and History
  • Gene expression and cancer classification
  • German legal, social, and political studies

Cornell University
2021-2025

Tri-Institutional PhD Program in Chemical Biology
2024-2025

Weill Cornell Medicine
2021-2023

Harvard University
2019-2023

Dana-Farber Cancer Institute
2020-2023

University of Konstanz
2016-2023

University of Bonn
2003-2021

NeuroDevelopment Center
2019

Massachusetts General Hospital
2019

Oberlin College
2018

Phil H. Lee Verneri Anttila Hyejung Won Yen‐Chen Anne Feng Jacob Rosenthal and 95 more Zhaozhong Zhu Elliot M. Tucker‐Drob Michel G. Nivard Andrew D. Grotzinger Daniëlle Posthuma Meg M.-J. Wang Dongmei Yu Eli A. Stahl Raymond K. Walters Richard Anney Laramie E. Duncan Tian Ge Rolf Adolfsson Tobias Banaschewski Síntia Belangero Edwin H. Cook Giovanni Coppola Eske M. Derks Pieter J. Hoekstra Jaakko Kaprio Anna Keski‐Rahkonen George Kirov Henry R. Kranzler Jurjen J. Luykx Luís Augusto Rohde Clement C. Zai Esben Agerbo María J. Arranz Philip Asherson Marie Bækvad‐Hansen Gísli Baldursson Mark A. Bellgrove Richard A. Belliveau Jan K. Buitelaar Christie L. Burton Jonas Bybjerg‐Grauholm Miguel Casas Felecia Cerrato Kimberly Chambert Tracy Air Bru Cormand Jennifer Crosbie Søren Dalsgaard Ditte Demontis Alysa E. Doyle Ashley Dumont Josephine Elia Jakob Grove Ólafur Ó. Guðmundsson Jan Haavik Hákon Hákonarson Christine Søholm Hansen Catharina A. Hartman Ziarih Hawi Amaia Hervás David M. Hougaard Daniel P. Howrigan Hailiang Huang Jonna Kuntsi K. Langley Klaus‐Peter Lesch Patrick W. L. Leung Sandra K. Loo Joanna Martin Alicia R. Martin James J. McGough Sarah E. Medland Jennifer L. Moran Ole Mors Preben Bo Mortensen Robert D. Oades Duncan S. Palmer Carsten Bøcker Pedersen Marianne G. Pedersen Triinu Peters Timothy Poterba Jesper Buchhave Poulsen Josep Antoni Ramos‐Quiroga Andreas Reif Marta Ribasés Aribert Rothenberger Paula Rovira Cristina Sánchez‐Mora F. Kyle Satterstrom Russell Schachar María Soler Artigas Stacy Steinberg Hreinn Stefánsson Patrick Turley G. Bragi Walters Thomas Werge Tetyana Zayats Dan E. Arking Francesco Bettella Joseph D. Buxbaum

10.1016/j.cell.2019.11.020 article EN publisher-specific-oa Cell 2019-12-01

Abstract Medical artificial intelligence (AI) has tremendous potential to advance healthcare by supporting and contributing the evidence-based practice of medicine, personalizing patient treatment, reducing costs, improving both provider experience. Unlocking this requires systematic, quantitative evaluation performance medical AI models on large-scale, heterogeneous data capturing diverse populations. Here, meet need, we introduce MedPerf, an open platform for benchmarking in domain....

10.1038/s42256-023-00652-2 article EN cc-by Nature Machine Intelligence 2023-07-17

Machine learning has become an increasingly ubiquitous technology, as big data continues to inform and influence everyday life decision-making. Currently, in medicine healthcare, well most other industries, the two prevalent machine paradigms are supervised transfer learning. Both practices rely on large-scale, manually annotated datasets train complex models. However, requirement of be labeled leaves excess unused, unlabeled available both public private repositories. Self-supervised (SSL)...

10.3390/informatics8030059 article EN cc-by Informatics 2021-09-10

Summary Genetic influences on psychiatric disorders transcend diagnostic boundaries, suggesting substantial pleiotropy of contributing loci. However, the nature and mechanisms these pleiotropic effects remain unclear. We performed a meta-analysis 232,964 cases 494,162 controls from genome-wide studies anorexia nervosa, attention-deficit/hyperactivity disorder, autism spectrum bipolar major depression, obsessive-compulsive schizophrenia, Tourette syndrome. correlation analyses revealed...

10.1101/528117 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2019-01-26

Abstract Imaging datasets in cancer research are growing exponentially both quantity and information density. These massive may enable derivation of insights for clinical care, but only if researchers equipped with the tools to leverage advanced computational analysis approaches such as machine learning artificial intelligence. In this work, we highlight three themes guide development tools: scalability, standardization, ease use. We then apply these principles develop PathML, a...

10.1158/1541-7786.mcr-21-0665 article EN cc-by-nc-nd Molecular Cancer Research 2021-12-08

Interpretability for machine learning models in medical imaging (MLMI) is an important direction of research. However, there a general sense murkiness what interpretability means. Why does the need MLMI arise? What goals one actually seek to address when needed? To answer these questions, we identify formalize and elements MLMI. By reasoning about real-world tasks common both image analysis its intersection with learning, five core interpretability: localization, visual recognizability,...

10.1109/access.2024.3387702 article EN cc-by-nc-nd IEEE Access 2024-01-01

Clear cell renal carcinoma (ccRCC) is molecularly heterogeneous, immune infiltrated, and selectively sensitive to checkpoint inhibition (ICI). However, the joint tumor-immune states that mediate ICI response remain elusive. We develop spatially aware deep-learning models of tumor features learn representations ccRCC tumors using diagnostic whole-slide images (WSIs) in untreated treated contexts (n = 1,102 patients). identify patterns grade heterogeneity WSIs not achievable through human...

10.1016/j.xcrm.2023.101189 article EN cc-by-nc-nd Cell Reports Medicine 2023-09-01

Gleason score, a measure of prostate tumor differentiation, is the strongest predictor lethal cancer at time diagnosis. Metabolomic profiling and patient serum could identify biomarkers aggressive disease lead to development less-invasive assay perform active surveillance monitoring. tissue samples was performed. Metabolite levels metabolite sets were compared across scores. Machine learning algorithms trained tuned predict transformation or differentiation status from data. A total 135...

10.1158/1541-7786.mcr-20-0548 article EN Molecular Cancer Research 2020-11-09

Abstract Holistic review has been widely adopted in medical education as a means of promoting equity the application process and diversity workforce. Artificial intelligence (AI) is rapidly emerging technology already having an impact on school residency students faculty alike increasingly turn to AI tools automate some steps preparation evaluation materials. While may have potential improve holistic admissions by increasing efficiency adding measure standardization among reviewers, authors...

10.1097/acm.0000000000005964 article EN Academic Medicine 2025-02-21

Recently, much research in the area of haptic technologies has focused on development waist-worn vibrotactile belts as substitution or augmentation modalities for audio-visual information. Vibrotactile have been used varied applications, such navigational aids, spatial orientation display, and balance control. Researchers mostly functionality these specific applications while neglecting performance usability. Considering versatility a belt, we previously conducted study design requirements...

10.1109/tim.2010.2065830 article EN IEEE Transactions on Instrumentation and Measurement 2010-12-11

Machine learning has become an increasingly ubiquitous technology, as big data continues to inform and influence everyday life decision-making. Currently in healthcare, well most other industries, the two prevalent machine paradigms are supervised transfer learning. Both practices rely on large-scale, manually annotated datasets train complex models. However, requirement of be labeled leaves excess unused, unlabeled available both public private repositories. Self-supervised (SSL) is a...

10.20944/preprints202108.0238.v1 preprint EN 2021-08-11

10.1007/s10849-011-9153-x article EN Journal of Logic Language and Information 2011-12-15

Clear cell renal carcinoma (ccRCC) is molecularly heterogeneous, immune infiltrated, and selectively sensitive to checkpoint inhibition (ICI). Established histopathology paradigms like nuclear grade have baseline prognostic relevance for ccRCC, although whether existing or novel histologic features encode additional heterogeneous biological clinical states in ccRCC uncertain. Here, we developed spatially aware deep learning models of tumor- immune-related learn representations tumors using...

10.1101/2023.01.18.524545 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-01-20

A human centered pragmatic approach to the design and implementation of a vibrotactile belt is presented in this paper. Based on (a) extensive usability feedback we've collected over past year, (b) thorough survey existing guidelines from literature, we propose set for development haptic belts that can span seamlessly across various applications. These cover three important aspects belts: functionality, performance usability, which are vital longitudinal use by end users. Taking...

10.1109/have.2009.5356126 article EN IEEE International Workshop on Haptic Audio visual Environments and Games 2009-11-01

Genes that are inherently subject to strong selective constraints tend be overretained in duplicate after polyploidy. They also continue experience similar, but somewhat relaxed, polyploidy event. We sought assess for how long the influence of is felt on these genes' pressures. analyzed two nested events Brassicaceae: At-α genome duplication most recent model plant Arabidopsis thaliana and a more hexaploidy shared by genus Brassica its relatives. By comparing strength direction natural...

10.1093/gbe/evy061 article EN cc-by-nc Genome Biology and Evolution 2018-03-01

Medical AI has tremendous potential to advance healthcare by supporting the evidence-based practice of medicine, personalizing patient treatment, reducing costs, and improving provider experience. We argue that unlocking this requires a systematic way measure performance medical models on large-scale heterogeneous data. To meet need, we are building MedPerf, an open framework for benchmarking machine learning in domain. MedPerf will enable federated evaluation which securely distributed...

10.48550/arxiv.2110.01406 preprint EN cc-by-nc-nd arXiv (Cornell University) 2021-01-01

Group instruction is the most common delivery method of motor skill training given its cost and time effectiveness. This also case during rehabilitation where therapists divide their attention among several patients. Compared to dedicated one-on-one instruction, group often suffers from reduced quality quantity feedback. Further, programs, patients struggle outside therapy sessions lack feedback found only clinic visits. We propose a wearable, low-cost motion sensing actuation system capable...

10.1117/12.2050204 article EN Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE 2014-05-22
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