- Microbial Metabolic Engineering and Bioproduction
- Genomics and Phylogenetic Studies
- Biofuel production and bioconversion
- Bacterial Infections and Vaccines
- Bacterial biofilms and quorum sensing
- Microbial bioremediation and biosurfactants
- Microbial Community Ecology and Physiology
- biodegradable polymer synthesis and properties
- Bacteriophages and microbial interactions
- Enzyme Production and Characterization
- Enzyme Catalysis and Immobilization
- Algal biology and biofuel production
- Big Data and Business Intelligence
- scientometrics and bibliometrics research
- Soil Carbon and Nitrogen Dynamics
- Petroleum Processing and Analysis
- Bacillus and Francisella bacterial research
- CRISPR and Genetic Engineering
- Nanoparticle-Based Drug Delivery
- Microbial Natural Products and Biosynthesis
- Global Energy and Sustainability Research
- Probiotics and Fermented Foods
- Bacterial Genetics and Biotechnology
- Microbial Metabolites in Food Biotechnology
- Metabolomics and Mass Spectrometry Studies
Great Lakes Bioenergy Research Center
2024
University of Wisconsin–Madison
2024
Eskişehir Osmangazi University
2020-2024
In this crowdsourced initiative, independent analysts used the same dataset to test two hypotheses regarding effects of scientists' gender and professional status on verbosity during group meetings. Not only analytic approach but also operationalizations key variables were left unconstrained up individual analysts. For instance, could choose operationalize as job title, institutional ranking, citation counts, or some combination. To maximize transparency process by which choices are made, a...
During 2020, the world has experienced extreme vulnerability in face of a disease outbreak. The coronavirus 2019 (COVID-19) pandemic discovered China and rapidly spread across globe, infecting millions, causing hundreds thousands deaths, severe downturns economies countries worldwide. Biosurfactants can play significant role prevention, control treatment diseases caused by these pathogenic agents through various therapeutic, pharmaceutical, environmental hygiene approaches. have potential to...
Abstract Salt tolerant organisms are increasingly being used for the industrial production of high‐value biomolecules due to their better adaptability compared mesophiles. Chromohalobacter canadensis is one early halophiles show promising biotechnology potential, which has not been explored date. Advanced high throughput technologies such as whole‐genome sequencing allow in‐depth insight into potential while at frontiers systems biology. At same time, genome‐scale metabolic models (GEMs)...
Enterococci are commensals of the human intestinal tract. Their use as probiotics is supported by their ability to confer several health benefits and eliminate foodborne pathogens but controversial due presence virulence antibiotic resistance traits. To them requires thorough research establish safety. Here, we sequenced whole genome a newly isolated Enterococcus durans MN187066 used suite bioinformatics tools analyze its beneficial probiotic traits well antimicrobial genes. The had length 2...
Abstract Eighty-seven bacteria isolates were screened for the presence of levansucrase encoding gene and those possessing used in expression studies production levan. Based on both screening methods, isolate P19-1 was determined as producer bacterium with highest amounts Whole genome sequencing done to characterize determine its genomic potential. Both 16 S rRNA closest Chromohalobacter salexigens. The genes suggesting a versatile carbohydrate nitrogen metabolism annotated. A secondary...
Many cells are known to actively release nano-sized outer membrane vesicles (OMVs) that contain bioactive proteins, lipids, and nucleic acids into the extracellular environment. These have been associated with adaptation environmental stress in other species, but their role halophilic salt is not known. This study aimed isolate characterize OMVs of Halomonas caseinilytica KB2 at various concentrations [6% (KB2-6), 12% (KB2-12), 18% (KB2-18)] identify patterns adaptations increasing salinity...
ABSTRACT This study investigated the impact of different bacterial populations on biomolecular structures cerebral organoids (COs) at various levels. COs were co-cultured with non-pathogenic (NM) and pathogenic (PM) populations. PM reduced number TUJ1+ neurons disrupted intact structure COs. In addition, was found to induce changes in transcript profile COs, including a decrease activity glycolysis pathway an increase pentose phosphate pathway, leading deterioration cellular energy...
ABSTRACT Halomonas elongata thrives in hypersaline environments producing polyhydroxyalkanoates (PHAs) and osmoprotectants such as ectoine. Despite its biotechnological importance, several aspects of the dynamics metabolism remain elusive. Here, we construct validate a genome‐scale metabolic network model for H. 153B. Then, investigate flux distribution during optimal growth, ectoine, PHA biosynthesis using statistical methods, pipeline based on shadow prices. Lastly, use optimization...