Marcel Frese

ORCID: 0000-0002-2232-7755
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Research Areas
  • Microbial Natural Products and Biosynthesis
  • X-ray Diffraction in Crystallography
  • Crystallization and Solubility Studies
  • Natural product bioactivities and synthesis
  • Marine Sponges and Natural Products
  • Phytochemistry and Biological Activities
  • Phytochemical compounds biological activities
  • Fungal Biology and Applications
  • Traditional and Medicinal Uses of Annonaceae
  • Synthesis and biological activity
  • Essential Oils and Antimicrobial Activity
  • Microbial bioremediation and biosurfactants
  • Enzyme Catalysis and Immobilization
  • Click Chemistry and Applications
  • Amino Acid Enzymes and Metabolism
  • Cyclopropane Reaction Mechanisms
  • Alkaloids: synthesis and pharmacology
  • Synthesis of Indole Derivatives
  • Carbohydrate Chemistry and Synthesis
  • Plant Disease Resistance and Genetics
  • Tryptophan and brain disorders
  • Phytochemistry and Bioactive Compounds
  • Bioactive natural compounds
  • Synthesis and Catalytic Reactions
  • Multicomponent Synthesis of Heterocycles

Bielefeld University
2014-2024

Addis Ababa University
2022

Halogenated arenes are important building blocks in medicinal and agrochemistry. Chemical electrophilic aromatic halogenation requires molecular halogen, whereas FAD-dependent halogenases form halogenated with high regioselectivity while only halide salts O2 required. This reaction proceeds at room temperature aqueous media. However, enzymatic is considered inefficient, mainly because not stable. Thus, the preparative application remained elusive. We were able to show that long-term...

10.1002/anie.201408561 article EN Angewandte Chemie International Edition 2014-11-12

Flavin-dependent halogenases catalyse halogenation of aromatic compounds. In most cases, this reaction proceeds with high regioselectivity and requires only the presence FADH2, oxygen, halide salts. Since marine habitats contain concentrations halides, organisms populating oceans might be valuable sources yet undiscovered halogenases. A new Hidden-Markov-Model (HMM) based on PFAM tryptophan halogenase model was used for analysis metagenomes. Eleven metagenomes were screened leading to...

10.1371/journal.pone.0196797 article EN cc-by PLoS ONE 2018-05-10

Abstract Regioselective methods to establish carbon–halide bonds are still rare, although halogenation is considered as a commonly used methodology for the functionalization of organic compounds. The incorporation halogen substituents by synthesis usually requires hazardous conditions, shows poor regioselectivity and results in formation unwanted byproducts. In addition, electrophilic aromatic substitution (S E Ar) obeys distinct rules depending on electron‐withdrawing or ‐donating groups...

10.1002/cctc.201301090 article EN ChemCatChem 2014-02-13

Abstract Biocatalytic halogenation with tryptophan halogenases is hampered by severe limitations such as low activity and stability. These drawbacks can be overcome directed evolution, but for screening large mutant libraries, a facile high‐throughput method required. Therefore, we developed quantitative halogenase assay based on Suzuki–Miyaura cross‐coupling towards the formation of fluorescent aryltryptophan. The technique was optimized application in crude E. coli lysate without...

10.1002/anie.201605635 article EN Angewandte Chemie International Edition 2016-09-13

Abstract The combination of the biocatalytic halogenation l ‐tryptophan with subsequent chemocatalytic Suzuki–Miyaura cross‐coupling reactions leads to modular synthesis an array C5, C6, or C7 aryl‐substituted tryptophan derivatives. In a three‐step one‐pot reaction, bromo substituent is initially incorporated regioselectively by immobilized 5‐, 6‐, 7‐halogenases, respectively, concomitant cofactor regeneration. proceeds in aqueous media at room temperature presence NaBr and O 2 . After...

10.1002/cctc.201600317 article EN ChemCatChem 2016-05-06

Flavin-dependent halogenases increasingly attract attention as biocatalysts in organic synthesis, facilitating environmentally friendly halogenation strategies that require only FADH2, oxygen, and halide salts. Different flavin-dependent tryptophan regioselectively chlorinate or brominate trypto-phan's indole moiety at C5, C6, C7. Here, we present the first substrate-bound structure of a 6-halogenase, namely Thal, also known ThdH, from bacterium Streptomyces albogriseolus 2.55 Å resolution....

10.1074/jbc.ra118.005393 article EN cc-by Journal of Biological Chemistry 2018-12-17

The crystal structure and unambiguous absolute configuration of meleagrin (1) isolated from fungus Emericella dentata Nq45 is reported herein to first time on the bases single X-ray diffraction. Together with 1, haenamindole (2), isorugulosuvine (3), secalonic acid D (4), ergosterol (5) cerebroside A (6) were obtained their structures determined by ESI MS NMR data analysis. Diverse biological activity was investigated. Compound 1 pronounced potent cytotoxicity against human cervix carcinoma...

10.1080/14786419.2020.1741583 article EN Natural Product Research 2020-03-19

Flavin-dependent halogenases are known to regioselectively introduce halide substituents into aromatic moieties, for example, the indole ring of tryptophan. The process requires salts and oxygen instead molecular halogen in chemical halogenation. However, reduced cofactor flavin adenine dinucleotide (FADH2) has be regenerated using a reductase. Consequently, coupled biocatalytic steps usually applied regeneration. Nicotinamide (NADH) mimics can employed stoichiometrically replace enzymatic...

10.1021/acscatal.8b04500 article EN publisher-specific-oa ACS Catalysis 2019-01-04

Abstract Flavin‐dependent tryptophan halogenases provide a regioselective access to chlorinated and brominated indole derivatives under mild conditions. Application of the halogenase requires regeneration system for reduced flavin cofactor FADH 2 , which is usually achieved by enzymatic or chemical reactions. We employed PyrH from Streptomyces rugosporus as model establish photochemical approach using blue light reductant . In contrast previous light‐driven biocatalysis flavin, conversion...

10.1002/cctc.201800280 article EN ChemCatChem 2018-04-26

Abstract Halogenierte Arene stellen wichtige Bausteine in Medizinalchemie und Agrochemie dar. Chemische elektrophile aromatische Halogenierungen verwenden elementare Halogene, während FAD‐abhängige Halogenasen lediglich Halogenidsalze O 2 bei Raumtemperatur wässrigem Milieu für die regioselektive Halogenierung benötigen. Enzymatische galten als ineffizient aufgrund der mangelnden Stabilität Halogenasen, was präparative Anwendung limitierte. Wir konnten zeigen, dass Langzeitstabilität damit...

10.1002/ange.201408561 article DE Angewandte Chemie 2014-11-12

Four new para-benzoquinone containing abietane-type diterpenoids (1-4) along with thirteen known (5-17) were isolated from the roots of Plectranthus punctatus. The structures compounds established by detailed spectroscopic analyses and comparison literature data. tested for their antibacterial cytotoxic activity showed significant inhibitory against all bacterial strains used, 6, 8, 10, 11 showing an inhibition zone Staphylococcus warneri even greater than reference drug, gentamycin.

10.3390/molecules22111919 article EN cc-by Molecules 2017-11-07

Terretonin N (1), a new highly oxygenated and unique tetracyclic 6-hydroxymeroterpenoid, was isolated together with seven known compounds from the ethyl acetate extract of solid-state fermented culture Nocardiopsis sp. Their structures were elucidated by spectroscopic analysis. The structure absolute configuration 1 unambiguously determined X-ray crystallography. isolation taxonomic characterization is reported. antimicrobial activity cytotoxicity strain compound studied using different...

10.3390/molecules23020299 article EN cc-by Molecules 2018-01-31

Cryptophycins are potent tubulin polymerization inhibitors with picomolar antiproliferative potency in vitro and activity against multidrug-resistant (MDR) cancer cells. Because of neurotoxic side effects limited efficacy vivo, cryptophycin-52 failed as a clinical candidate treatment. However, this class compounds has emerged attractive payloads for tumor-targeting applications. In study, cryptophycin was conjugated to the cyclopeptide

10.3390/pharmaceutics11040151 article EN cc-by Pharmaceutics 2019-04-01

A study of diterpenoids as active ingredients against cancer from the roots extract Casearia barteri Mast. (IC50 = 1.57 μg mL-1) led to isolation six new clerodane diterpenoids, named barterins A-F (1-6) alongside seven known compounds, caseamembrin A, E, casearlucin graveospene G, N-trans-feruloyltyramine, N-cis-feruloytyramine and sitosterol-3-O-β-D-(6-O-palmitoyl)-glucopyranoside. Their structures were elucidated based on NMR spectroscopic data mass spectrometry. The absolute...

10.1039/d4ra04393f article EN cc-by RSC Advances 2024-01-01

Abstract Flavin‐dependent halogenases selectively introduce halogen substituents into (hetero‐)aromatic substrates and require only molecular oxygen halide salts for this regioselective oxidative CH‐functionalization. Genomic analysis of Xanthomonas campestris pv. B100 identified three novel putative members enzyme class. They were shown to into, e. g., substituted indoles, while preferring bromide over chloride. magnified image

10.1002/adsc.201801591 article EN Advanced Synthesis & Catalysis 2019-02-18

Isoshamixanthone (1), a new stereoisomeric pyrano xanthone together with the previously known fungal metabolites, epiisoshamixanthone (2), sterigmatocystin (3), arugosin C (4), norlichexanthone (5), diorcinol (6), ergosterol and methyllinoleate, were obtained from endophytic strain Aspergillus sp. ASCLA isolated leaf tissues of medicinal plant Callistemon subulatus. The chemical structure (1) was elucidated by extensive 1D, 2D NMR, ESI HR mass measurements, comparison literature data....

10.1080/14786419.2018.1548458 article EN Natural Product Research 2019-01-19

Phytochemical investigation of the ethyl acetate extract roots Aloe megalacantha led to isolation four new natural products—1,8-dimethoxynepodinol (1), aloesaponarin III (2), 10-O-methylchrysalodin (3) and methyl-26-O-feruloyl-oxyhexacosanate (4)—along with ten known compounds. All purified metabolites were characterized by NMR, mass spectrometric analyses comparison literature data. The isolates evaluated for their cytotoxic activity against a human cervix carcinoma cell line KB-3-1 some...

10.3390/molecules22071136 article EN cc-by Molecules 2017-07-07

Terretonin O (1), a new meroterpenoid, was isolated individually from both methanolic extracts of thermophilic Aspergillus terreus TM8 and marine LGO13. The recently reported terretonins M (2) N (3) were further the fungus LGO13 along with nine known compounds, terrelumamide A (4), terrein (5), methyl-3,4,5-trimethoxyl-2-[2-(nicotinamide)benzamido] benzoate (6), butyrolactones I-III (7–9), aspulvinone (10), ergosterol, ergost-4-ene-3-one methyl linoleate. Structure terretonin (1) established...

10.1080/14786419.2018.1544977 article EN Natural Product Research 2019-01-03

Abstract Die Anwendung von Tryptophan‐Halogenasen für die enzymatische Halogenierung hat noch gravierende Limitierungen. Diese könnten mittels gerichteter Evolution überwunden werden, jedoch bedarf Durchmusterung großer Mutantenbibliotheken eines robusten Hochdurchsatz‐fähigen Testsystems. Im Hinblick darauf wurde eine Suzuki‐Miyaura‐Kreuzkupplung als quantitativer Halogenase‐Assay auf Basis der Bildung fluoreszierenden Aryltryptophans entwickelt. Methode im E.‐coli‐Lysat ohne intermediäre...

10.1002/ange.201605635 article DE Angewandte Chemie 2016-09-13

Tumor targeting has emerged as an advantageous approach to improving the efficacy and safety of cytotoxic agents or radiolabeled ligands that do not preferentially accumulate in tumor tissue. The somatostatin receptors (SSTRs) belong G-protein-coupled receptor superfamily they are overexpressed many neuroendocrine tumors (NETs). SSTRs can be efficiently targeted with octreotide, a cyclic octapeptide is derived from native somatostatin. conjugation cargoes octreotide represents attractive for...

10.3390/pharmaceutics11050220 article EN cc-by Pharmaceutics 2019-05-07
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