A5065422931- Gut microbiota and health
- Bacterial Identification and Susceptibility Testing
- Genomics and Phylogenetic Studies
- Probiotics and Fermented Foods
- Infective Endocarditis Diagnosis and Management
- Parasites and Host Interactions
- Infectious Diseases and Mycology
- Fungal Biology and Applications
- Plant Pathogens and Fungal Diseases
- Clostridium difficile and Clostridium perfringens research
- Molecular Biology Techniques and Applications
- Mycorrhizal Fungi and Plant Interactions
- Pneumonia and Respiratory Infections
- Celiac Disease Research and Management
- Eating Disorders and Behaviors
- SARS-CoV-2 and COVID-19 Research
- Influenza Virus Research Studies
- Global Maternal and Child Health
- Bacterial Infections and Vaccines
- Diet and metabolism studies
- Child Nutrition and Water Access
- Pancreatitis Pathology and Treatment
- Antifungal resistance and susceptibility
- Ginseng Biological Effects and Applications
- Mycobacterium research and diagnosis
Institut de Recherche en Sciences de la Santé
2025
Nazi Boni University
2019-2023
Centre National de la Recherche Scientifique
2013-2015
Institut de Recherche pour le Développement
2013-2015
Aix-Marseille Université
2013-2015
Inserm
2013-2015
Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes
2014
Background Few studies describing eukaryotic communities in the human gut microbiota have been published. The objective of this study was to investigate comprehensively repertoire plant and fungal species an obese patient. Methodology/Principal Findings A stool specimen collected from a 27-year-old Caucasian woman with body mass index 48.9 who living Marseille, France. Plant were identified using PCR-based method incorporating 25 primer pairs specific for each phylum universal primers...
The repertoire of microeukaryotes in the human gut has been poorly explored, mainly individuals living northern hemisphere countries. We further explored this using PCR-sequencing and culture seven four tropical A total 41 including 38 different fungal species three protists were detected. Four species, Davidiella tassiana, sp., Corticiaceae Penicillium uniquely detected by culture; 27 Candida albicans, glabrata, Trichosporon asahii, Clavispora lusitaniae, Debaryomyces hansenii, Malassezia...
Few studies have focused on eukaryote community in the human gut. Here, diversity of microeukaryotes gut microbiota an anorexic patient was investigated using molecular and culture approaches. A 21-year-old Caucasian woman admitted intensive care unit for severe malnutrition anorexia nervosa. One stool specimen collected from patient, polymerase chain reaction-based explorations yielded a restricted fungi but four Tetratrichomonas sp., Aspergillus ruber, Penicillium solitum Cladosporium...
Pertussis remains among the top ten most common fatal aetiologies of acute respiratory infections worldwide. This study reports findings from first laboratory-confirmed pertussis outbreak primary schoolchildren in Burkina Faso. A cross-sectional was conducted during an districts Sabou and Sapouy following alert national surveillance system. Suspected cases were investigated, with oropharyngeal/nasopharyngeal samples sociodemographic clinical data collected. Samples analyzed using multiplex...
The human gastrointestinal tract exists as a complex ecosystem and contains mycobiome microbiome that play central roles in host health, disease immune system regulation. Here, we reviewed the traditional culture-dependent methods, culturomics methods molecular used to study gut microbiome. With development of next-generation sequencing techniques, these last two have greatly broadened understanding bacteria health disease. Thus, dysbiosis microbiota mycobiota has been found be associated...
Strain Marseille-Q0835T is an aerobic, non-motile and non-spore-forming Gram-positive coccus isolated from the stools of a Burkinabe woman. In this report, we present its phenotypic description including MALDI-TOF mass spectrometry analysis genome sequencing. Marseille-Q0835T; 2.9768-Mb exhibited 41.9 mol% G+C content 2699 predicted genes. Considering features comparative studies, propose strain as type Enterococcus burkinafasonensis sp. nov., new species within family Enterococcaceae.
Mycobacterium tuberculosis causes pulmonary tuberculosis, a deadly infection of which the clinical expression and prognosis are not fully understood at individual level, apart from genetic susceptibility traits. We investigated whether gut microbiota may correlate with status. Culturomics investigations in two patients controls Burkina Faso found 60 different bacterial species 97 controls, including 45 common. Further analysis results level indicated seven bacteria, Enterococcus mundtii...
Background: Despite the availability of vaccines against SARS‑CoV‑2, mortality due to COVID-19 continues increase, with nearly 7 million deaths reported globally. Continued analysis evolution and genomic diversity can provide necessary information timely inform public health responses. We report dynamics SARS‑CoV‑2 lineages in Burkina Faso between August 2021 September 2022.Methodology: A total 188 patients, whose nasopharyngeal and/or oropharyngeal swabs tested positive for SARS-CoV-2 by...
Enterococcus timonensis sp. nov., strain Marseille-P2817T, is a facultatively anaerobic, motile and non-spore-forming Gram-positive coccus which was isolated from the sputum of healthy adult man in Marseilles. We present herein its phenotypic description together with MALDI-TOF (matrix-assisted laser-desorption/ionization time-of-flight) mass spectrometry analysis genome sequencing comparison. The 2 123 933 bp long 38.46 mol% G+C content, it contains 1983 protein-coding genes 65 RNA...
Strain Marseille-P9525 T was isolated from the gut microbiota of a 28-year-old woman and exhibits 2.23-Mb (G+C content, 66.8%) draft genome sequence containing 1,902 protein-coding genes, 49 tRNAs, 3 rRNAs. The 16S rRNA sequencing in silico DNA-DNA hybridization indicated that strain represents new species to be described.
Strain Marseille-P9525T is a Gram-positive, obligatory anaerobic and non-motile bacterium isolated from human faecal micobiota. Its phenotypic pattern, including mass spectrometry peptide profile genome sequence, support the proposal of new species for which name Enorma burkinafasonensis sp. nov. proposed. The type strain has been deposited in public collection.
The performance of specific antibodies in a post-chemotherapy situation remains controversial issue. Thus the study aims to investigate variations different immunoglobulins, IgG, IgG subclasses, IgM and IgA against Schistosoma mansoni soluble eggs antigens post-treatment their correlation with excretion. A longitudinal was conducted on 928 participants over 5 years age from February 2007 March 2008 “Vallee du Kou” Burkina Faso, rural area where S. is endemic. At inclusion during follow-up...
In Burkina Faso, most reported Schistosoma infections are related to urinary schistosomiasis and focus on school-aged children. Here, we aimed determine the prevalence of intestinal associated risk factors among patients in “Vallee du Kou” Faso one year after treatment with praziquantel. A longitudinal study involving 980 participants both sexes aged 6 80 years living was carried out from February 2007 March 2008. The were requested answer a questionnaire based their activities hygiene...