Simon Merkt

ORCID: 0000-0002-8017-4494
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About
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Research Areas
  • Additive Manufacturing and 3D Printing Technologies
  • Additive Manufacturing Materials and Processes
  • Manufacturing Process and Optimization
  • COVID-19 epidemiological studies
  • SARS-CoV-2 and COVID-19 Research
  • Gene Regulatory Network Analysis
  • Vaccine Coverage and Hesitancy
  • Laser Material Processing Techniques
  • Cellular and Composite Structures
  • Viral Infections and Outbreaks Research
  • Machine Learning and Data Classification
  • Protein Structure and Dynamics
  • Product Development and Customization
  • Reservoir Engineering and Simulation Methods
  • Energy Load and Power Forecasting
  • Microbial Metabolic Engineering and Bioproduction
  • Technology Assessment and Management
  • Probabilistic and Robust Engineering Design
  • Molecular Communication and Nanonetworks
  • Bioinformatics and Genomic Networks
  • Gaussian Processes and Bayesian Inference
  • Model Reduction and Neural Networks
  • Orthopedic Surgery and Rehabilitation
  • Wireless Body Area Networks
  • vaccines and immunoinformatics approaches

University of Bonn
2020-2024

RWTH Aachen University
2011-2017

Fraunhofer Institute for Laser Technology
2014-2017

This paper focusses on the investigation of mechanical properties lattice structures manufactured by selective laser melting using contour-hatch scan strategy. The motivation for this research is systematic elastic and plastic deformation TiAl6V4 at different strain rates. To investigate influence rate response (e.g., energy absorption) structures, compression tests TiAl6V4-lattice with rates are carried out to determine from resulting stress-strain curves. Results compared stainless steel...

10.2351/1.4898835 article EN Journal of Laser Applications 2014-12-09

Reproducibility and reusability of the results data-based modeling studies are essential. Yet, there has been—so far—no broadly supported format for specification parameter estimation problems in systems biology. Here, we introduce PEtab, a which facilitates using Systems Biology Markup Language (SBML) models set tab-separated value files describing observation model experimental data as well parameters to be estimated. We already implemented PEtab support into eight well-established...

10.1371/journal.pcbi.1008646 article EN cc-by PLoS Computational Biology 2021-01-26

BackgroundOver 1 year since the first reported case, true COVID-19 burden in Ethiopia remains unknown due to insufficient surveillance. We aimed investigate seroepidemiology of SARS-CoV-2 among front-line hospital workers and communities Ethiopia.MethodsWe did a population-based, longitudinal cohort study at two tertiary teaching hospitals involving workers, rural residents, urban Jimma Addis Ababa. Hospital were recruited both hospitals, community participants by convenience sampling...

10.1016/s2214-109x(21)00386-7 article EN cc-by-nc-nd The Lancet Global Health 2021-10-22

Mechanistic models are important tools to describe and understand biological processes. However, they typically rely on unknown parameters, the estimation of which can be challenging for large complex systems. pyPESTO is a modular framework systematic parameter estimation, with scalable algorithms optimization uncertainty quantification. While tailored ordinary differential equation problems, broadly applicable black-box problems. Besides own implementations, it provides unified interface...

10.1093/bioinformatics/btad711 article EN cc-by Bioinformatics 2023-11-01

Under-reporting of COVID-19 and the limited information about circulating SARS-CoV-2 variants remain major challenges for many African countries. We analyzed infection dynamics in Addis Ababa Jimma, Ethiopia, focusing on reinfection, immunity, vaccination effects. conducted an antibody serology study spanning August 2020 to July 2022 with five rounds data collection across a population 4723, sequenced PCR-test positive samples, used available test positivity rates, constructed two...

10.1038/s41467-024-47556-2 article EN cc-by Nature Communications 2024-04-24

Epidemiological models are widely used to analyze the spread of diseases such as global COVID-19 pandemic caused by SARS-CoV-2. However, all based on simplifying assumptions and often sparse data. This limits reliability parameter estimates predictions. In this manuscript, we demonstrate relevance these limitations pitfalls associated with use overly simplistic models. We considered data for early phase outbreak in Wuhan, China, an example, perform estimation, uncertainty analysis model...

10.1016/j.epidem.2021.100439 article EN cc-by-nc-nd Epidemics 2021-01-29

Abstract Quantitative dynamic models are widely used to study cellular signal processing. A critical step in modelling is the estimation of unknown model parameters from experimental data. As sizes and datasets steadily growing, established parameter optimization approaches for mechanistic become computationally extremely challenging. Mini-batch methods, as employed deep learning, have better scaling properties. In this work, we adapt, apply, benchmark mini-batch ordinary differential...

10.1038/s41467-021-27374-6 article EN cc-by Nature Communications 2022-01-10

Selective laser melting (SLM) is a manufacturing process that builds up metallic or ceramic parts layer by directly from 3D-computer-aided design data, offering, for example, the advantage of imposing little restrictions in terms geometric complexity. One main challenges SLM to improve its efficiency increasing build rate and thereby decreasing time cost. way achieving this applied power beam diameter, more volume shorter period time. Another option improving reducing material which has be...

10.2351/1.4906392 article EN Journal of Laser Applications 2015-02-01

ENGLISH ABSTRACT: Selective laser melting (SLM) is becoming an economically viable choice for manufacturing complex serial parts. This paper focuses on a geometric complexity analysis as part of the integrative technology evaluation model (ITEM) presented here. In contrast to conventional methodologies, ITEM considers interactions between product and process innovations generated by SLM. The processes that compete with SLM main goal ITEM. includes test from Festo AG. closes discussion how...

10.7166/23-2-333 article EN cc-by The South African Journal of Industrial Engineering 2011-11-05

Abstract Standard finger implants, manufactured by conventional techniques (e.g. machining), as they are used today for patients suffering from inflammatoryrheumatic diseases such rheumatoid arthritis (RA) or degenerative like osteoarthritis, lacking of individuality and long‐term stability. In this study here, a way to generate patient tailored implants based on XtremeCT technique is described. First Selective Laser Melting (SLM) illustrate the feasibility manufacturing with additional...

10.1002/latj.201400029 article EN Laser Technik Journal 2014-04-01

This study aimed to retrospectively assess the cost-effectiveness of various COVID-19 vaccination strategies in Ethiopia. It involved healthcare workers (HCWs) and community participants; was conducted through interviews serological tests. Local SARS-CoV-2 variants seroprevalence rates, as well national reports status were also analyzed. A analysis performed determine most economical settings with limited vaccine access high seroprevalence. Before arrival vaccines, 65% HCWs had antibodies...

10.3390/vaccines12070745 article EN cc-by Vaccines 2024-07-05

The design and manufacture of profile extrusion dies is characterised by costly running-in trials. Significant cost time savings can be achieved replacing the experimental trials virtual ones. A simulative optimisation, however, often leads to complex, free-formed flow channels. feasible such only possible with additive manufacturing processes as Selective Laser Melting (SLM). Against this background, SLM investigated. major challenge ensure a specific surface quality extruded plastics...

10.1063/1.5016712 article EN AIP conference proceedings 2017-01-01

This paper gives an overview about Additive Manufacturing (AM) in general and Selective Laser Melting (SLM) more detail. We discuss the economic potential of AM show that it is directly correlated to process efficiency AM. present different new machine concept order increase efficiency. one new, diode laser based SLM concepts.

10.1109/hpd.2015.7439684 article EN 2015-10-01

This paper focuses on the evaluation of manufacturing processes that are competing with Selective Laser Melting (SLM). In 3D-part production serial parts SLM is starting to be an economic choice for manufacturing. An integrated technology model (ITEM) presented helps decision makers determine potential while comparing conventional technologies. contrast methodologies ITEM considers interactions between product and process innovations generated by SLM. The closes a technical economical test...

10.4028/www.scientific.net/amr.337.274 article EN Advanced materials research 2011-09-01

Mechanistic models are important tools to describe and understand biological processes. However, they typically rely on unknown parameters, the estimation of which can be challenging for large complex systems. We present pyPESTO, a modular framework systematic parameter estimation, with scalable algorithms optimization uncertainty quantification. While tailored ordinary differential equation problems, pyPESTO is broadly applicable black-box problems. Besides own implementations, it provides...

10.48550/arxiv.2305.01821 preprint EN cc-by-nc-nd arXiv (Cornell University) 2023-01-01

Abstract Under-reporting of COVID-19 cases and the lack information about circulating SARS-CoV-2 variants remain major challenges for many African countries to date. To address this, we present a comprehensive analysis dynamics infections in Ethiopia, focusing on reinfection dynamics, (variant-specific) immunity, impact vaccination rates. We conducted an antibody serology study, sequenced positive polymerase chain reaction tests, used available test positivity rates, constructed two...

10.21203/rs.3.rs-3307821/v1 preprint EN cc-by Research Square (Research Square) 2023-09-14

Abstract Epidemiological models are widely used to analyse the spread of diseases such as global COVID-19 pandemic caused by SARS-CoV-2. However, all based on simplifying assumptions and sparse data. This limits reliability parameter estimates predictions. In this manuscript, we demonstrate relevance these limitations performing a study outbreak in Wuhan, China. We perform estimation, uncertainty analysis model selection for range established epidemiological models. Amongst others, employ...

10.1101/2020.04.19.20071597 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2020-04-22
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