Jonathan Flint

ORCID: 0000-0002-9427-4429
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About
Contact & Profiles
Research Areas
  • Genetic Mapping and Diversity in Plants and Animals
  • Genetic Associations and Epidemiology
  • Genetic and phenotypic traits in livestock
  • Genetics and Neurodevelopmental Disorders
  • Genomic variations and chromosomal abnormalities
  • Epigenetics and DNA Methylation
  • Bioinformatics and Genomic Networks
  • RNA Research and Splicing
  • Mental Health Research Topics
  • Genomics and Rare Diseases
  • Chromosomal and Genetic Variations
  • Child and Adolescent Psychosocial and Emotional Development
  • Cognitive Abilities and Testing
  • Stress Responses and Cortisol
  • Neurotransmitter Receptor Influence on Behavior
  • Autism Spectrum Disorder Research
  • Genomics and Chromatin Dynamics
  • Congenital heart defects research
  • Adipose Tissue and Metabolism
  • Molecular Biology Techniques and Applications
  • Neuroendocrine regulation and behavior
  • Emotion and Mood Recognition
  • Cancer-related gene regulation
  • Receptor Mechanisms and Signaling
  • Gene expression and cancer classification

University of California, Los Angeles
2016-2024

Neurobehavioral Systems
2016-2024

Robert Jones and Agnes Hunt Orthopaedic Hospital
2024

Olive View-UCLA Medical Center
2024

East China Normal University
2015-2023

Yale University
1999-2022

Centre for Human Genetics
2009-2018

University of Oxford
2009-2018

East London NHS Foundation Trust
2018

State University of New York
2018

We report genome sequences of 17 inbred strains laboratory mice and identify almost ten times more variants than previously known. use these genomes to explore the phylogenetic history mouse examine functional consequences allele-specific variation on transcript abundance, revealing that at least 12% transcripts show a significant tissue-specific expression bias. By identifying candidate 718 quantitative trait loci we molecular nature their position relative genes vary according effect size...

10.1038/nature10413 article EN cc-by-nc-sa Nature 2011-09-01

<b><i>Objective:</i></b> To make evidence-based recommendations concerning the evaluation of child with a nonprogressive global developmental delay. <b><i>Methods: </i></b> Relevant literature was reviewed, abstracted, and classified. Recommendations were based on four-tiered scheme evidence classification. <b><i>Results: Global delay is common affects 1% to 3% children. Given yields about 1%, routine metabolic screening not indicated in initial Because higher yield (3.5% 10%), even absence...

10.1212/01.wnl.0000031431.81555.16 article EN Neurology 2003-02-11
Jacqueline K. White Anna-Karin Gerdin Natasha A. Karp Edward J. Ryder Marija Buljan and 95 more James Bussell Jennifer Salisbury Simon Clare Neil J. Ingham Christine Podrini Richard Houghton Jeanne Estabel Joanna Bottomley David Melvin David Sunter Niels C. Adams David Tannahill Darren W. Logan Daniel G. MacArthur Jonathan Flint Vinit B. Mahajan Stephen H. Tsang Ian Smyth Fiona M. Watt William C. Skarnes Gordon Dougan David J. Adams Ramiro Ramírez‐Solis Allan Bradley Karen P. Steel Lauren Baker Caroline Barnes Ryan M. Beveridge Emma L. Cambridge Damian M. Carragher Prabhjoat Chana Kay Clarke Yvette Hooks Natalia Igosheva Ozama Ismail Hannah Jackson Leanne Kane R. W. Lacey David Lafont Mark Lucas Simon Maguire Katherine McGill Rebecca E. McIntyre Sophie Messager Lynda Mottram Lee Mulderrig Selina Pearson Hayley Protheroe Laura-Anne Roberson Grace Salsbury Mark Sanderson Daniel Sanger Carl Shannon Peter Thompson Elizabeth Tuck Valerie E. Vancollie Lisa Brackenbury Wendy Bushell Ross Cook Priya Dalvi Diane Gleeson Bishoy Habib Matt Hardy Kifayathullah Liakath‐Ali Evelina Miklejewska Stacey Price Debarati Sethi Elizabeth Trenchard Dominique Von Schiller Sapna Vyas Anthony P. West John R. Woodward Elizabeth Wynn Arthur Evans David Gannon Mark Griffiths S. Holroyd Vivek Iyer Christian Kipp Morag A. Lewis Wei Li Darren Oakley David Richardson Damian Smedley Chukwuma A. Agu Jackie Bryant Liz Delaney Nadia I. Gueorguieva Helen Tharagonnet Alan J. Townsend Daniel Biggs Ellen Brown Adam Collinson Charles-Étienne Dumeau Evelyn Grau

Mutations in whole organisms are powerful ways of interrogating gene function a realistic context. We describe program, the Sanger Institute Mouse Genetics Project, that provides step toward aim knocking out all genes and screening each line for broad range traits. found hitherto unpublished were as likely to reveal phenotypes known genes, suggesting novel represent rich resource investigating molecular basis disease. many unexpected detected only because we screened them, emphasizing value...

10.1016/j.cell.2013.06.022 article EN cc-by-nc-nd Cell 2013-07-01

High-resolution mapping of quantitative trait loci (QTL) in animals has proved to be difficult because the large effect sizes detected crosses between inbred strains are often caused by numerous linked QTLs, each small effect. In a study fearfulness mice, we have shown it is possible fine map small-effect QTLs genetically heterogeneous stock (HS). This strategy powerful general method provided that formed HS can reliably HS. We show here single-marker association analysis identifies only two...

10.1073/pnas.230304397 article EN Proceedings of the National Academy of Sciences 2000-10-24

Psychological traits are commonly inferred from covariation in sets of behavioral measures that otherwise appear to have little common. Emotionality mice is such a trait, defined here by activity and defecation novel environment emergence into the open arms an elevated plus maze. Behavioral quantitative trait analyses were conducted on four obtained 879 F2 intercross. Three loci, murine chromosomes 1, 12, 15, mapped influence emotionality. This studies strain, sex, individual differences...

10.1126/science.7660127 article EN Science 1995-09-08

We compare and contrast the genetic architecture of quantitative phenotypes in two genetically well-characterized model organisms, laboratory mouse, Mus musculus , fruit fly, Drosophila melanogaster with that found our own species from recent successes genome-wide association studies. show current large numbers loci, each small effect, is true for all examined, discrepancies can be largely explained by differences experimental designs used. argue distribution effect size common variants same...

10.1101/gr.086660.108 article EN cc-by-nc Genome Research 2009-05-01

The development of the mammalian brain is dependent on extensive neuronal migration. Mutations in mice and humans that affect migration result abnormal lamination structures with associated behavioral deficits. Here, we report identification a hyperactive N-ethyl-N-nitrosourea (ENU)-induced mouse mutant abnormalities laminar architecture hippocampus cortex, accompanied by impaired We show causative mutation lies guanosine triphosphate (GTP) binding pocket α-1 tubulin (Tuba1) affects...

10.1016/j.cell.2006.12.017 article EN cc-by Cell 2007-01-01
Jenny C. Taylor Hilary C. Martin Stefano Lise John Broxholme Jean‐Baptiste Cazier and 95 more Andy Rimmer Alexander Kanapin Gerton Lunter Simon Fiddy Chris Allan A.R. Aricescu Moustafa Attar Christian Babbs Jennifer Becq David Beeson Celeste Bento P Bignell Edward Blair Veronica J. Buckle Katherine R. Bull Ondřej Cais Holger Cario Helen Chapel Richard R. Copley Richard J. Cornall Jude Craft Karin Dahan Emma E. Davenport Calliope A. Dendrou Olivier Devuyst Aimée L Fenwick Jonathan Flint Lars Fugger Rodney D. Gilbert Anne Goriely Angie Green Ingo H. Greger Russell Grocock Anja V. Gruszczyk Robert Hastings Edouard Hatton Douglas R. Higgs Adrian V. S. Hill Chris Holmes Malcolm F. Howard Linda Hughes Peter Humburg David H. Johnson Fredrik Karpe Zoya Kingsbury Usha Kini Julian C. Knight Jonathan Krohn Sarah Lamble Craig B. Langman Lorne Lonie Joshua Luck Davis J. McCarthy Simon J. McGowan Mary Frances McMullin Kerry A. Miller Lisa Murray Andrea H. Németh M. Andrew Nesbit David Nutt Elizabeth Ormondroyd Annette Oturai Alistair T. Pagnamenta Smita Y. Patel Melanie J. Percy Nayia Petousi Paolo Piazza Siân E. Piret Guadalupe Polanco‐Echeverry Niko Popitsch Fiona Powrie Christopher W. Pugh Lynn Quek Peter A. Robbins Kathryn Robson Alexandra Russo Natasha Sahgal Pauline A. van Schouwenburg Anna Schuh Earl D. Silverman Alison Simmons Per Soelberg Sørensen Elizabeth Sweeney John Taylor Rajesh V. Thakker Ian Tomlinson Amy Trebes Stephen R.F. Twigg Holm H. Uhlig Paresh Vyas Tim J. Vyse Steven A. Wall Hugh Watkins Michael P. Whyte Lorna Witty

10.1038/ng.3304 article EN Nature Genetics 2015-05-18
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