Masumi Abe

ORCID: 0000-0003-1550-2006
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About
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Research Areas
  • DNA Repair Mechanisms
  • CRISPR and Genetic Engineering
  • Pluripotent Stem Cells Research
  • RNA Interference and Gene Delivery
  • Cancer Genomics and Diagnostics
  • Molecular Biology Techniques and Applications
  • Immune cells in cancer
  • Hydrogen's biological and therapeutic effects
  • RNA Research and Splicing
  • Immunodeficiency and Autoimmune Disorders
  • Immunotherapy and Immune Responses
  • Gene expression and cancer classification
  • Immune Cell Function and Interaction
  • Animal Genetics and Reproduction
  • Cancer, Hypoxia, and Metabolism
  • CAR-T cell therapy research
  • Cancer-related gene regulation
  • Cancer Research and Treatments
  • RNA and protein synthesis mechanisms
  • Biochemical effects in animals
  • Genomics and Chromatin Dynamics
  • Plant Genetic and Mutation Studies
  • RNA modifications and cancer
  • bioluminescence and chemiluminescence research
  • Epigenetics and DNA Methylation

National Institutes for Quantum Science and Technology
1998-2024

Tohoku University
2024

Cell Biotech (South Korea)
2017

Kyushu University
1967-2014

National Research Institute of Police Science
2011-2014

Panasonic (Japan)
2005

NTL Institute for Applied Behavioral Science
2003

Radiation Effects Research Foundation
1989-1997

University Clinic of Traumatology
1990

Kyoto University
1990

The severe combined immune deficiency (SCID) mouse was reported as an animal model for human deficiency. Through the course of several studies, DNA-dependent protein kinase catalytic subunit (DNA-PKcs) gene came to be considered a candidate SCID-responsible gene. We isolated ORF murine DNA-PKcs from SCID mice and their parent strain C.B-17 determined DNA sequences. contained 4128-aa residues had 78.9% homology with A particularly important finding is that T transversion results in...

10.1073/pnas.94.6.2438 article EN Proceedings of the National Academy of Sciences 1997-03-18

Therapeutic cloning, whereby nuclear transfer (NT) is used to generate embryonic stem cells (ESCs) from blastocysts, has been demonstrated successfully in mice and cattle. However, if NT-ESCs have abnormalities, such as those associated with the offspring produced by reproductive their scientific medical utilities might prove limited. To evaluate characteristics of NT-ESCs, we established more than 150 NT-ESC lines adult somatic several mouse strains. Here, show that these were able...

10.1634/stemcells.2005-0537 article EN Stem Cells 2006-05-12

The robust regenerative ability of planarians depends on a population somatic stem cells called neoblasts, which are the only mitotic in adults and responsible for blastema formation after amputation. molecular mechanism underlying neoblast differentiation associated with remains unknown. Here, using planarian Dugesia japonica we found that DjmkpA, mitogen-activated protein kinase (MAPK) phosphatase-related gene, was specifically expressed response to increased extracellular signal-related...

10.1242/dev.060764 article EN Development 2011-05-24

Two major complementary double-strand break (DSB) repair pathways exist in vertebrates, homologous recombination (HR), which involves Rad54, and non-homologous end-joining, requires the DNA-dependent protein kinase (DNA-PK). DNA-PK comprises a catalytic subunit (DNA-PKcs) DNA-binding Ku70 Ku80 heterodimer. To define activities of individual components DSB repair, we targeted DNA-PKcs gene chicken DT40 cells. deficiency caused defect that was, unexpectedly, suppressed by<i>KU70</i>...

10.1074/jbc.m106295200 article EN cc-by Journal of Biological Chemistry 2001-11-01

Neighboring genes are often coordinately expressed within cis-regulatory modules, but evidence that nonparalogous share functions in mammals is lacking. Here, we report mutation of either TMEM138 or TMEM216 causes a phenotypically indistinguishable human ciliopathy, Joubert syndrome. Despite lack sequence homology, the aligned head-to-tail configuration and joined by chromosomal rearrangement at amphibian-to-reptile evolutionary transition. Expression two mediated conserved regulatory...

10.1126/science.1213506 article EN Science 2012-01-27

Point mutations at codons 12 and 13 of c-Ki-ras gene were analyzed in human pancreatic cancer. DNAs obtained from sample tissues amplified by means polymerase chain reaction dot blot hybridization assays with oligonucleotide probes appropriate for detecting these codons. Out 38 evaluated cases, point codon found 35 cases; resulted changes the coded amino acid to aspartic 24 valine 9 arginine 2 cases cysteine one case. In case, a glycine-to-aspartic mutation was 13. two distinct...

10.1111/j.1349-7006.1990.tb02539.x article EN Japanese Journal of Cancer Research 1990-02-01

Vascular endothelial growth factor (VEGF) is a key mediator of tumor angiogenesis. Tumor cells are exposed to higher oxidative stress compared normal cells. Numerous reports have demonstrated that the intracellular redox (oxidation/reduction) state closely associated with pattern VEGF expression. Electrolyzed reduced water (ERW) produced near cathode during electrolysis scavenged H2O2 and decreased release from human lung adenocarcinoma cell line, A549, down-regulated both transcription...

10.1248/bpb.31.19 article EN Biological and Pharmaceutical Bulletin 2008-01-01

A large number of point mutations have been identified in induced pluripotent stem cell (iPSC) genomes to date. Whether these are associated with iPSC generation is an important and controversial issue. In this study, we approached critical issue different ways, including assessment iPSCs versus embryonic cells (ESCs), investigation variant allele frequencies the heterogeneity within a single clone. Through analyses, obtained strong evidence that iPSC-generation-associated occur frequently...

10.1016/j.stemcr.2013.11.006 article EN cc-by-nc-nd Stem Cell Reports 2014-01-01

Induced pluripotent stem cells (iPSCs) are generated by direct reprogramming of somatic and hold great promise for novel therapies. However, several studies have reported genetic variations in iPSC genomes. Here, we investigated point mutations identified whole-genome sequencing mouse human iPSCs the context epigenetic status. In contrast to disease-causing single-nucleotide polymorphisms, de novo introduced during were underrepresented protein-coding genes open chromatin regions, including...

10.1016/j.celrep.2017.09.060 article EN cc-by Cell Reports 2017-10-01

c-Myc transduction has been considered previously to be nonessential for induced pluripotent stem cell (iPSC) generation. In this study, we investigated the effects of on generation iPSCs from an inbred mouse strain using a genome integration-free vector exclude genetic background and genomic integration exogenous genes. Our findings reveal clear difference between generated four defined factors including (4F-iPSCs) those produced without (3F-iPSCs). Molecular cellular analyses did not any...

10.1002/stem.685 article EN Stem Cells 2011-07-05

A number of point mutations have been identified in reprogrammed pluripotent stem cells such as iPSCs and ntESCs. The molecular basis for these has remained elusive however, which is a considerable impediment to their potential medical application. Here we report specific stage at iPSC generation not reduced response ionizing radiation, i.e. radio-resistance. Quite intriguingly, G1/S cell cycle checkpoint deficiency occurs transient fashion the initial genome reprogramming process. These...

10.1038/s41467-019-13830-x article EN cc-by Nature Communications 2020-01-10

Background Dendritic cells (DCs) are a promising therapeutic target in cancer immunotherapy given their ability to prime antigen-specific T cells, and initiate antitumor immune response. A major obstacle for DC-based is the difficulty obtain sufficient number of functional DCs. Theoretically, this limitation can be overcome by using induced pluripotent stem (iPSCs); however, strategies engage iPSC-derived DCs (iPSC-DCs) into remain elucidated. Accumulating evidence showing that induction...

10.1136/jitc-2021-002432 article EN cc-by-nc Journal for ImmunoTherapy of Cancer 2021-05-01

Phosphorylation at serine 15 of the human p53 tumor suppressor protein is induced by DNA damage and correlates with accumulation its activation as a transcription factor. The DNA-dependent kinase (DNA-PK) can phosphorylate homologous 18 murine in vitro. Contradictory reports exist about requirement for DNA-PK vivo cell cycle arrest response to ionizing radiation. While primary SCID (severe combined immunodeficiency) cells, that have defective DNA-PK, show normal arrest, transcriptionally...

10.1074/jbc.274.24.17139 article EN cc-by Journal of Biological Chemistry 1999-06-01

The neoblasts are the only somatic stem cells in planarians possessing pluripotency, and can give rise to all types of cells, including germline cells. Recently, accumulated knowledge about transcriptome expression dynamics various pluripotent has provided important opportunities understand not fundamental mechanisms but also stemness across species at molecular level. easily be eliminated by radiation. Also, using fluorescence activated cell sorting (FACS), we purify collect many neoblasts,...

10.1387/ijdb.113434ns article EN The International Journal of Developmental Biology 2012-01-01

The variable region of immunoglobulin (Ig) heavy chain is encoded by three separate genes: (VH), diversity (DH) and joining (JH) genes on the germ-line genome. In mice, most complementarity determining (CDR) III chains myelomas hybridomas sequenced so far can be assigned to one 12 already identified DH homology nucleotide sequences gene-coding regions although extranucleotides, so-called N segments, are found at boundaries between JH as well VH DH. On other hand, Siebenlist et al. (Nature...

10.1002/eji.1830180426 article EN European Journal of Immunology 1988-04-01

ABSTRACT Koala retrovirus (KoRV) is a gammaretrovirus that currently endogenizing into koalas. Studies on KoRV infection have been hampered by the lack of replication-competent molecular clone. In this study, we constructed an infectious clone, termed plasmid pKoRV522, isolate (strain Aki) from koala reared in Japanese zoo. The virus KoRV522, derived grew efficiently human embryonic kidney (HEK293T) cells, attaining 10 6 focus-forming units/ml. Several mutations Gag (L domain) and Env...

10.1128/jvi.01584-12 article EN Journal of Virology 2013-02-21

Abstract Unlike most DNA-dependent protein kinase, catalytic subunit (DNA-PKcs)–deficient mouse cell strains, we show in the present study that targeted deletion of DNA-PKcs two different human lines abrogates VDJ signal end joining episomal assays. Although mechanism is not well defined, deficency results spontaneous reduction ATM expression many cultured (including those examined this study) and DNA-PKcs–deficient mice. We considered varying loss might explain differences strains animal...

10.4049/jimmunol.1501654 article EN The Journal of Immunology 2016-02-27

Human Tetherin/BST-2 has recently been identified as a cellular antiviral factor that blocks the release of various enveloped viruses. In this study, we cloned cDNA fragment encoding feline homolog and characterized protein product. The degree amino acid sequence identity between human was 44.4%. Similar to Tetherin/BST-2, expression mRNA inducible by type I interferon (IFN). Exogenous efficiently inhibited endogenous retrovirus RD-114. extracellular domain two putative N-linked...

10.1371/journal.pone.0018247 article EN cc-by PLoS ONE 2011-03-29

We established the radiosensitive cell line SX9 from mammary carcinoma FM3A. In cells a defect of DNA-dependent protein kinase (DNA-PK) activity was suggested. Additionally, complementation test suggested that belongs to x-ray cross-complementing group (XRCC) 7. Isolation and sequence analyses catalytic subunit <i>(dna-pkcs)</i> cDNA in disclosed nucleotide "T" (9572) "C" transition causing substitution amino acid residue leucine (3191) proline. Interestingly, mutation occurs one allele,...

10.1074/jbc.273.21.13058 article EN cc-by Journal of Biological Chemistry 1998-05-01
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