Niklas Mejhert

ORCID: 0000-0003-1785-833X
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About
Contact & Profiles
Research Areas
  • Adipose Tissue and Metabolism
  • Adipokines, Inflammation, and Metabolic Diseases
  • Lipid metabolism and biosynthesis
  • RNA Research and Splicing
  • MicroRNA in disease regulation
  • Cardiovascular Disease and Adiposity
  • Endoplasmic Reticulum Stress and Disease
  • RNA modifications and cancer
  • Epigenetics and DNA Methylation
  • Ubiquitin and proteasome pathways
  • Peroxisome Proliferator-Activated Receptors
  • Microbial Metabolic Engineering and Bioproduction
  • Metabolism, Diabetes, and Cancer
  • Fibroblast Growth Factor Research
  • Medical and Biological Sciences
  • Cancer-related molecular mechanisms research
  • Regulation of Appetite and Obesity
  • Immune Cell Function and Interaction
  • Pancreatic function and diabetes
  • Circadian rhythm and melatonin
  • Muscle Physiology and Disorders
  • Single-cell and spatial transcriptomics
  • Metabolomics and Mass Spectrometry Studies
  • Cell Image Analysis Techniques
  • Genomics and Chromatin Dynamics

Karolinska University Hospital
2010-2024

Karolinska Institutet
2014-2024

Steno Diabetes Centers
2024

Harvard University
2017-2022

Broad Institute
2020

Peter Arner Carsten O. Daub Kristoffer Vitting‐Seerup Robin Andersson Berit Lilje and 95 more Finn Drabløs Andreas Lennartsson Michelle Rönnerblad Olga Hrydziuszko Morana Vitezic Tom C. Freeman Ahmad M. N. Alhendi Peter Arner Richard A Axton J. Kenneth Baillie Anthony G Beckhouse Beatrice Bodega James Briggs Frank Brombacher Margaret R. Davis Michael Detmar Anna Ehrlund Mitsuhiro Endoh Afsaneh Eslami Michela Fagiolini Lynsey Fairbairn Geoffrey J. Faulkner Carmelo Ferrai Malcolm E Fisher Lesley M. Forrester Dan Goldowitz Reto Guler Thomas J Ha Mitsuko Hara Meenhard Herlyn Tomokatsu Ikawa Chieko Kai Hiroshi Kawamoto Levon M. Khachigian S. Peter Klinken Soichi Kojima Haruhiko Koseki Sarah Klein Niklas Mejhert Ken Miyaguchi Yosuke Mizuno Mitsuru Morimoto Kelly J Morris Christine L. Mummery Yutaka Nakachi Soichi Ogishima Mariko Okada Yasushi Okazaki Valerio Orlando Dmitry A. Ovchinnikov Robert Passier Margaret Patrikakis Ana Pombo Xian‐Yang Qin Sugata Roy Hiroki Sato Suzana Savvi Alka Saxena Anita Schwegmann Daisuke Sugiyama Rolf Swoboda Hiroshi Tanaka Andru Tomoiu Louise N Winteringham Ernst J. Wolvetang Chiyo Yanagi-Mizuochi Misako Yoneda Susan E. Zabierowski Peter Zhang Imad Abugessaisa Nicolas Bertin Alexander D. Diehl Shiro Fukuda Masaaki Furuno Jayson Harshbarger Akira Hasegawa Fumi Hori Sachi Ishikawa-Kato Yuri Ishizu Masayoshi Itoh Tsugumi Kawashima Miki Kojima Naoto Kondo Marina Lizio Terrence F. Meehan Chris Mungall Mitsuyoshi Murata Hiromi Nishiyori-Sueki Serkan Sahin Sayaka Nagao-Sato Jessica Severin Michiel de Hoon Jun Kawai Takeya Kasukawa Timo Lassmann

Although it is generally accepted that cellular differentiation requires changes to transcriptional networks, dynamic regulation of promoters and enhancers at specific sets genes has not been previously studied en masse. Exploiting the fact active are transcribed, we simultaneously measured their activity in 19 human 14 mouse time courses covering a wide range cell types biological stimuli. Enhancer RNAs, then messenger RNAs encoding transcription factors, dominated earliest responses....

10.1126/science.1259418 article EN Science 2015-02-13

In obesity, white adipose tissue (WAT) inflammation is linked to insulin resistance. Increased adipocyte chemokine (C-C motif) ligand 2 (CCL2) secretion may initiate by attracting the migration of inflammatory cells into tissue. Using an unbiased approach, we identified microRNAs (miRNAs) that are dysregulated in human obesity and assessed their possible role controlling CCL2 production. subcutaneous WAT obtained from 56 subjects, 11 miRNAs were present all subjects downregulated obesity. Of...

10.2337/db11-1508 article EN cc-by-nc-nd Diabetes 2012-06-12
Shuhei Noguchi Takahiro Arakawa Shiro Fukuda Masaaki Furuno Akira Hasegawa and 95 more Fumi Hori Sachi Ishikawa-Kato Kaoru Kaida Ai Kaiho Mutsumi Kanamori-Katayama Tsugumi Kawashima Miki Kojima Atsutaka Kubosaki Ri-ichiroh Manabe Mitsuyoshi Murata Sayaka Nagao-Sato Kenichi Nakazato Noriko Ninomiya Hiromi Nishiyori-Sueki Shohei Noma Eri Saijyo Akiko Saka Mizuho Sakai Christophe Simon Naoko Suzuki Michihira Tagami Shoko Watanabe Shigehiro Yoshida Peter Arner Richard A Axton Magda Babina J. Kenneth Baillie Timothy C. Barnett Anthony G Beckhouse Antje Blumenthal Beatrice Bodega Alessandro Bonetti James Briggs Frank Brombacher Ailsa J Carlisle Hans Clevers Carrie Davis Michael Detmar Taeko Dohi Albert S.B. Edge Matthias Edinger Anna Ehrlund Karl Ekwall Mitsuhiro Endoh Hideki Enomoto Afsaneh Eslami Michela Fagiolini Lynsey Fairbairn Mary C. Farach‐Carson Geoffrey J. Faulkner Carmelo Ferrai Malcolm E Fisher Lesley M. Forrester Rie Fujita Jun-ichi Furusawa Teunis B. H. Geijtenbeek T Gingeras Dan Goldowitz Sven Guhl Reto Guler Stefano Gustincich Thomas J Ha Masahide Hamaguchi Mitsuko Hara Yuki Hasegawa Meenhard Herlyn Peter Heutink Kelly J Hitchens David Hume Tomokatsu Ikawa Yuri Ishizu Chieko Kai Hiroshi Kawamoto Yuki I. Kawamura Judith Kempfle Tony Kenna Juha Kere Levon M. Khachigian Toshio Kitamura Sarah Klein S. Peter Klinken Alan J. Knox Soichi Kojima Haruhiko Koseki Shigeo Koyasu Weon-Ju Lee Andreas Lennartsson Alan Mackay‐Sim Niklas Mejhert Yosuke Mizuno Hiromasa Morikawa Mitsuru Morimoto Kazuyo Moro Kelly J Morris Hozumi Motohashi

Abstract In the FANTOM5 project, transcription initiation events across human and mouse genomes were mapped at a single base-pair resolution their frequencies monitored by CAGE (Cap Analysis of Gene Expression) coupled with single-molecule sequencing. Approximately three thousands samples, consisting variety primary cells, tissues, cell lines, time series samples during activation development, subjected to uniform pipeline data production. The analysis started measuring RNA extracts assess...

10.1038/sdata.2017.112 article EN cc-by Scientific Data 2017-08-29

The contribution of cellular heterogeneity and architecture to white adipose tissue (WAT) function is poorly understood. Herein, we combined spatially resolved transcriptional profiling with single-cell RNA sequencing image analyses map human WAT composition structure. This identified 18 cell classes unique propensities form organized homo- heterotypic clusters. Of these, three constituted mature adipocytes that were similar in size, but distinct their spatial arrangements profiles. Based on...

10.1016/j.cmet.2021.07.018 article EN cc-by Cell Metabolism 2021-08-10

Abstract Reducing body weight to improve metabolic health and related comorbidities is a primary goal in treating obesity 1,2 . However, maintaining loss considerable challenge, especially as the seems retain an obesogenic memory that defends against changes 3,4 Overcoming this barrier for long-term treatment success difficult because molecular mechanisms underpinning phenomenon remain largely unknown. Here, by using single-nucleus RNA sequencing, we show both human mouse adipose tissues...

10.1038/s41586-024-08165-7 article EN cc-by Nature 2024-11-18

Wnt signaling regulates adipogenesis and adipocyte function. Secreted frizzled-related proteins (SFRPs) are a family of secreted (SFRP1-5) that bind inhibit Wnts. Several members, including SFRP5, have recently been implicated in dysfunction obesity.Our objective was to characterize the expression, secretion, function SFRP human white adipose tissue (WAT) fat cells.SFRP1-5 mRNA expression measured sc visceral WAT from lean obese individuals correlated insulin sensitivity. secretion explants...

10.1210/jc.2012-3416 article EN The Journal of Clinical Endocrinology & Metabolism 2013-02-08

The regulatory gene pathways that accompany loss of adipose tissue in cancer cachexia are unknown and were explored using pangenomic transcriptome profiling. Global expression profiles abdominal subcutaneous studied gastrointestinal patients with (n=13) or without (n=14) cachexia. Cachexia was accompanied by preferential decreased fat cell volume, but not number. Adipose regulating energy turnover upregulated, whereas genes related to structure (cellular adhesion, extracellular matrix actin...

10.1038/sj.bjc.6605665 article EN cc-by-nc-sa British Journal of Cancer 2010-04-20
Melina Claussnitzer Simon N. Dankel Bernward Klocke Harald Grallert Viktoria Glunk and 95 more Tea Berulava Heekyoung Lee Nikolay Oskolkov João Fadista Kerstin Ehlers Simone Wahl Christoph Hoffmann Kun Qian Tina Rönn Helene Riess Martina Müller‐Nurasyid Nancy Bretschneider Timm Schroeder Thomas Skurk Bernhard Horsthemke Derek Spieler Martin Klingenspor Martin Seifert Michael J. Kern Niklas Mejhert Ingrid Dahlman Ola Hansson Stefanie M. Hauck Matthias Blüher Peter Arner Leif Groop Thomas Illig Karsten Suhre Yi‐Hsiang Hsu Gunnar Mellgren Hans Hauner Helmut Laumen Benjamin F. Voight Laura J. Scott Valgerður Steinthórsdóttir Andrew P. Morris Christian Dina Ryan Welch Eleftheria Zeggini Cornelia Huth Yurii S. Aulchenko Guðmar Þorleifsson Laura McCulloch Teresa Ferreira Harald Grallert Najaf Amin Guanming Wu Cristen J. Willer Soumya Raychaudhuri Steve McCarroll Claudia Langenberg Oliver Hofmann Josée Dupuis Lu Qi Ayellet V. Segrè Mandy van Hoek Pau Navarro Kristin Ardlie Beverley Balkau Rafn Benediktsson Amanda J. Bennett Roza Blagieva Eric Boerwinkle Lori L. Bonnycastle Kristina Bengtsson Boström Bert Bravenboer Suzannah Bumpstead Noël P. Burtt G. Charpentier Peter S. Chines Marilyn C. Cornelis David Couper Gabe Crawford Alex S. F. Doney Katherine S. Elliott Amanda L. Elliott Michael R. Erdos Caroline S. Fox Christopher S. Franklin Martha Ganser Christian Gieger Niels Grarup Todd J. Green Simon J. Griffin Christopher J. Groves Candace Guiducci Samy Hadjadj Neelam Hassanali Christian Herder Bo Isomaa Anne Jackson Paul R V Johnson Torben Jørgensen Wen H. Kao Norman Klopp

10.1016/j.cell.2013.10.058 article EN publisher-specific-oa Cell 2014-01-01

OBJECTIVE Large subcutaneous fat cells associate with insulin resistance and high risk of developing type 2 diabetes. We investigated if changes in cell volume mass correlate improvements the metabolic profile after bariatric surgery obese patients. RESEARCH DESIGN AND METHODS Fat number were measured abdominal adipose tissue 62 women before years Roux-en-Y gastric bypass (RYGB). Regional body by dual-energy X-ray absorptiometry; sensitivity hyperinsulinemic-euglycemic clamp; plasma glucose,...

10.2337/dc13-2395 article EN cc-by-nc-nd Diabetes Care 2014-04-24

Nonalcoholic fatty liver disease (NAFLD) is characterized by excess lipid accumulation in hepatocytes and represents a huge public health problem owing to its propensity progress nonalcoholic steatohepatitis, fibrosis, failure. The lipids stored hepatic steatosis (HS) are primarily triglycerides (TGs) synthesized two acyl-CoA:diacylglycerol acyltransferase (DGAT) enzymes. Either DGAT1 or DGAT2 catalyzes this reaction, these enzymes have been suggested differentially utilize exogenous...

10.1002/hep.30765 article EN Hepatology 2019-05-13

Obesity and type 2 diabetes are strongly associated with adipose tissue dysfunction impaired adipogenesis. Understanding the molecular underpinnings that control adipogenesis is thus of fundamental importance for development novel therapeutics against metabolic disorders. However, translational approaches hampered as current models do not accurately recapitulate Here, a scaffold-free versatile 3D adipocyte culture platform chemically defined conditions presented in which primary human...

10.1002/advs.202100106 article EN cc-by Advanced Science 2021-06-24

Lipid droplets (LDs) are organelles of cellular lipid storage with fundamental roles in energy metabolism and cell membrane homeostasis. There has been an explosion research into the biology LDs, part due to their relevance diseases storage, such as atherosclerosis, obesity, type 2 diabetes, hepatic steatosis. Consequently, there is increasing need for a resource that combines datasets from systematic analyses LD biology. Here, we integrate high-confidence, systematically generated human,...

10.1016/j.devcel.2022.01.003 article EN cc-by Developmental Cell 2022-02-01

Abstract The mechanisms promoting disturbed white adipocyte function in obesity remain largely unclear. Herein, we integrate adipose tissue (WAT) metabolomic and transcriptomic data from clinical cohorts find that the WAT phosphocreatine/creatine ratio is increased creatine kinase-B expression activity decreased obese state. In human vitro murine vivo models, demonstrate phosphocreatine metabolism adipocytes alters adenosine monophosphate-activated protein kinase via effects on...

10.1038/s42255-022-00525-9 article EN cc-by Nature Metabolism 2022-02-14

White adipocytes function as major energy reservoirs in humans by storing substantial amounts of triglycerides, and their dysfunction is associated with metabolic disorders; however, the mechanisms underlying cellular specialization during adipogenesis remain unknown. Here, we generate a spatiotemporal proteomic atlas human adipogenesis, which elucidates remodelling well spatial reorganization pathways to optimize cells for lipid accumulation highlights coordinated regulation protein...

10.1038/s42255-024-01025-8 article EN cc-by Nature Metabolism 2024-04-02

Glutamine and glutamate are interconverted by several enzymes alterations in this metabolic cycle linked to cardiometabolic traits. Herein, we show that obesity-associated insulin resistance is characterized decreased plasma white adipose tissue glutamine-to-glutamate ratios. We couple these stoichiometric changes perturbed fat cell glutaminase glutamine synthase messenger RNA protein abundance, which together promote glutaminolysis. In human adipocytes, reductions activity aerobic...

10.1038/s42255-024-01083-y article EN cc-by Nature Metabolism 2024-07-15

MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression and have multiple effects in various tissues including adipose inflammation, a condition characterized by increased local release of the pro-lipolytic cytokine tumor necrosis factor-alpha (TNF-α). Whether miRNAs adipocyte lipolysis is unknown. We set out to determine whether affect human fat cells. To this end, eleven known be present tissue were over-expressed vitro differentiated adipocytes followed assessments...

10.1371/journal.pone.0086800 article EN cc-by PLoS ONE 2014-01-24

White adipose tissue (WAT) expands in part through adipogenesis, a process involving fat cell generation and fatty acid (FA) storage into triglycerides (TGs). Several findings suggest that inter-individual regional variations adipogenesis are linked to metabolic complications. We aimed identify cellular markers define human adipocyte progenitors (APs) with pronounced adipogenic/TG ability. Using an unbiased single screen of passaged adipose-derived stromal cells (hADSCs), we identified...

10.1002/stem.2635 article EN Stem Cells 2017-05-04
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