Mike Starkey

ORCID: 0000-0003-4216-0224
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About
Contact & Profiles
Research Areas
  • Veterinary Oncology Research
  • Infectious Diseases and Mycology
  • Virus-based gene therapy research
  • Tumors and Oncological Cases
  • Cancer Genomics and Diagnostics
  • Hedgehog Signaling Pathway Studies
  • Alzheimer's disease research and treatments
  • Mast cells and histamine
  • Cancer-related gene regulation
  • Epigenetics and DNA Methylation
  • Genomics and Rare Diseases
  • Animal Genetics and Reproduction
  • Oral and Maxillofacial Pathology
  • Immunotherapy and Immune Responses
  • Genomic variations and chromosomal abnormalities
  • Molecular Biology Techniques and Applications
  • Metabolomics and Mass Spectrometry Studies
  • Genetic factors in colorectal cancer
  • Agriculture and Farm Safety
  • Chromatin Remodeling and Cancer
  • Gene expression and cancer classification
  • Ocular Oncology and Treatments
  • Congenital heart defects research
  • Cardiovascular Function and Risk Factors
  • Genetic and phenotypic traits in livestock

Wellcome Sanger Institute
2023-2024

Animal Health Trust
2011-2021

Minnesota Department of Agriculture
2018

Molecular Oncology (United States)
2014

Medical Research Council
2006

Genomics (United Kingdom)
2006

Wellcome Trust
2006

Abstract The Catalogue Of Somatic Mutations In Cancer (COSMIC), https://cancer.sanger.ac.uk/cosmic, is an expert-curated knowledgebase providing data on somatic variants in cancer, supported by a comprehensive suite of tools for interpreting genomic data, discerning the impact alterations disease, and facilitating translational research. catalogue accessed used thousands cancer researchers clinicians daily, allowing them to quickly access information from immense pool curated over 29...

10.1093/nar/gkad986 article EN cc-by Nucleic Acids Research 2023-11-01

Canine osteosarcoma is clinically nearly identical to the human disease, but common and highly heritable, making genetic dissection feasible.Through genome-wide association analyses in three breeds (greyhounds, Rottweilers, Irish wolfhounds), we identify 33 inherited risk loci explaining 55% 85% of phenotype variance each breed. The greyhound locus exhibiting strongest association, located 150 kilobases upstream genes CDKN2A/B, also most rearranged canine tumors. top germline candidate...

10.1186/gb-2013-14-12-r132 article EN cc-by Genome biology 2013-12-12

Canine mast cell tumours (CMCT) are one of the most common skin in dogs with a major impact on canine health. Certain breeds have higher risk developing tumours, suggesting that underlying predisposing germ-line genetic factors play role development this disease. The largely unknown, although somatic mutations oncogene C-KIT been detected proportion CMCT, making CMCT comparative model for mastocytosis humans where frequent. We performed genome wide association study golden retrievers from...

10.1371/journal.pgen.1005647 article EN cc-by PLoS Genetics 2015-11-20

Canine mammary tumours (CMT) are the most common neoplasia in unspayed female dogs. CMTs suitable naturally occurring models for human breast cancer and share many characteristics, indicating that genetic causes could also be shared. We have performed a genome-wide association study (GWAS) English Springer Spaniel dogs identified significant locus on chromosome 11 (praw = 5.6x10-7, pperm 0.019). The associated haplotype spans 446 kb region overlapping CDK5RAP2 gene. protein has function cell...

10.1371/journal.pgen.1006029 article EN cc-by PLoS Genetics 2016-05-09

Objective To evaluate if 14 genes that discriminate metastasising and non‐metastasising human uveal melanomas can differentiate in dogs. Methods Nineteen archival biopsies of eyes with a histopathological classification primary benign (n = 9) malignant 10) melanoma were selected. Thoracic and/or abdominal metastases confirmed metastatic spread the tumour seven dogs during follow‐up period. Gene expression was assayed by Reverse Transcription‐quantitative Polymerase Chain Reaction. Genes...

10.1111/jsap.12141 article EN Journal of Small Animal Practice 2013-10-28

Uveal melanoma (UM) is the most common primary intraocular tumour in dogs. There no effective means of predicting whether a will metastasize. microRNA (miRNA) metastasis signatures have been identified for several human cancers, including UM.In this study we investigated metastasizing and non-metastasizing canine UMs can be distinguished by miRNA expression levels.miRNA microarray profiling was used to compare 8 12 formalin-fixed, paraffin-embedded (FFPE) UM biopsies.Fourteen miRNAs...

10.1111/vco.12315 article EN Veterinary and Comparative Oncology 2017-05-17

Oral malignant melanoma (OMM) is the most common canine melanocytic neoplasm. Overlap between somatic mutation profiles of OMM and human mucosal melanomas suggest a shared UV-independent molecular aetiology. In with melanomas, metastasise. There no reliable means predicting metastasis, systemic therapies for metastatic disease are largely palliative. Herein, we employed exon microarrays comparative expression profiling FFPE biopsies 18 primary that metastasised 10 did not Genes displaying...

10.1038/s41598-019-42839-x article EN cc-by Scientific Reports 2019-04-24

Cutaneous mast cell tumours are one of the most common canine cancers. Approximately 25% metastasise. Activating c-kit mutations present in about 20% tumours, but metastases occur absence mutations. Tumour metastasis is associated with significantly diminished survival spite adjuvant chemotherapy. Available prognostic tests do not reliably predict whether a tumour will In this study we compared global expression profiles 20 primary cutaneous that metastasised those did The objective was to...

10.1371/journal.pone.0208026 article EN cc-by PLoS ONE 2018-12-19

Dogs represent a unique spontaneous cancer model. Osteosarcoma (OSA) is the most common primary bone tumor in dogs (OMIA 001441-9615), and strongly resembles human forms of OSA. Several large- to giant-sized dog breeds, including Leonberger, have greatly increased risk developing We performed genome-wide association analysis with high-density imputed SNP genotype data from 273 Leonberger cases median age 8.1 [3.1-13.5] years 365 controls older than eight years. This revealed significant...

10.3390/genes12121964 article EN Genes 2021-12-09

Mast cell tumours are the most common type of skin cancer in dogs, representing a significant concern canine health. The molecular pathogenesis is largely unknown, but breed-predisposition for mast tumour development suggests involvement inherited genetic risk factors some breeds. In this study, we aimed to identify germline associated with Labrador Retrievers, breed an elevated development. Using methodological approach that combined genome-wide association targeted next generation...

10.1371/journal.pgen.1007967 article EN cc-by PLoS Genetics 2019-03-22

Objectives To describe the clinicopathological and genetic characteristics of mast cell tumours in dogs less than 12 months old. Materials Methods Retrospective review aged when diagnosed with at three referral hospitals UK. Results Sixteen pure‐bred were included, which 11 female. The median age first presentation diagnosis 7.6 9 months, respectively. In 13 cutaneous they subcutaneous. Four described as high‐grade (Patnaik or Kiupel) nine Patnaik grade II; had mitotic index >5 10...

10.1111/jsap.13181 article EN Journal of Small Animal Practice 2020-07-01

High immigration rates contribute to the high incidence of pediatric tuberculosis (TB) in San Diego, Calif. Adolescents frequently have poor access health care and may not receive appropriate TB screening. School-based screening has been ineffective detecting other parts country.To determine prevalence infection disease a high-risk population school students through school-based screening.Cross-sectional study an analysis risk factors for attending 2 Diego schools with percentages...

10.1001/archpedi.152.7.646 article EN Archives of Pediatrics and Adolescent Medicine 1998-07-01

Cytogenetic detection of unbalanced genomic aberrations in tumours is a strategy for the identification tumour suppressor genes and oncogenes. When considered concert with clinical data, approach also represents means identifying markers prognosis. In preliminary investigation molecular basis canine meningioma tumorigenesis, we profiled three by comparative hybridization. Distinct patterns sub-chromosomal deletions were identified suggesting alternative mechanisms initiation. The deleted...

10.1111/j.1476-5829.2008.00159.x article EN Veterinary and Comparative Oncology 2008-08-19

Conventional classification schemes for canine lymphomas do not discriminate between phenotypically indistinct tumours that may exhibit differences in behaviour. Transcriptional profiling has the potential to afford objective clinically relevant stratification of lymphomas, and its sensitivity means prognostic assays could be performed on tumour needle aspirates collected without anaesthesia. In this pilot study, we compared expression profiles derived from surgical biopsies fine five...

10.1111/j.1476-5829.2009.00205.x article EN Veterinary and Comparative Oncology 2009-12-30

To evaluate the effect of syringe size, needle number passes and operator experience on cell yield from tumour fine-needle aspirates, quantity quality extractable RNA.Fine-needle aspirates were collected canine lymphoma, cutaneous mast tumour, anal gland adenocarcinoma, fibrosarcoma oral malignant melanoma using nine different techniques.There was a significant difference in between aspirate techniques for melanoma, lymphoma adenocarcinoma. The application suction yielded largest cells. Cell...

10.1111/jsap.12790 article EN Journal of Small Animal Practice 2017-11-29

To document the fine needle aspiration methods used by UK veterinary practitioners for assessment of cutaneous masses and relate this to achievement a representative sample.An internet-based questionnaire was designed publicised in national press, at surgical meeting, letters surgeons.One hundred seventy respondents replied questionnaire: 58 · 2% sampled on basis appearance or behaviour; 41 3% every mass. Practitioners with greater oncological caseload who graduated more recently were likely...

10.1111/jsap.12234 article EN Journal of Small Animal Practice 2014-06-06

The identification of individual dog chromosomes is problematic because the 38 pairs autosomes are small and acrocentric. Here we describe design application a FISH tool that enables definitive each autosome in normal karyotype, without relying on subjective interpretation DAPI banding patterns. From high-resolution physical map canine genome, have chosen panel 80 chromosome-specific BAC clones. DNA from clone labeled with one five different fluorochrome-conjugated nucleotides. By selecting...

10.1159/000098187 article EN Cytogenetic and Genome Research 2007-01-01
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