A5101641228- Microbial Community Ecology and Physiology
- Gut microbiota and health
- Methane Hydrates and Related Phenomena
- Microbial Metabolic Engineering and Bioproduction
- Protist diversity and phylogeny
- Anaerobic Digestion and Biogas Production
- Genomics and Phylogenetic Studies
- Atmospheric and Environmental Gas Dynamics
- Genital Health and Disease
- Environmental DNA in Biodiversity Studies
- Bacteriophages and microbial interactions
- Metabolomics and Mass Spectrometry Studies
- Cervical Cancer and HPV Research
- Cancer-related molecular mechanisms research
- Membrane Separation Technologies
- Membrane Separation and Gas Transport
- Protein Structure and Dynamics
- Membrane-based Ion Separation Techniques
- Zoonotic diseases and public health
- Soil Carbon and Nitrogen Dynamics
- Bioinformatics and Genomic Networks
- Evolution and Genetic Dynamics
Research Center for Eco-Environmental Sciences
2021-2025
Chinese Academy of Sciences
2021-2025
University of Chinese Academy of Sciences
2022-2024
Abstract Ecological and evolutionary processes simultaneously regulate microbial diversity, but the their driving forces remain largely unexplored. Here we investigated ecological characteristics of microbiota in hot springs spanning a broad temperature range (54.8–80 °C) by sequencing 16S rRNA genes. Our results demonstrated that niche specialists generalists are embedded complex interaction dynamics. On thermal tolerance axis, (T) sensitive (at specific temperature) versus T-resistant...
Abstract Anaerobic methanotrophic (ANME) microbes play a crucial role in the bioprocess of anaerobic oxidation methane (AOM). However, due to their unculturable status, diversity is poorly understood. In this study, we established microfluidics‐based epicPCR (Emulsion, Paired Isolation, and Concatenation PCR) fuse 16S rRNA gene mcrA reveal ANME ( hosts) three sampling push‐cores from marine cold seep. A total 3725 amplicon sequence variants (ASVs) hosts were detected, classified into 78...
Microbial communities exhibit intricate interactions underpinned by metabolic dependencies. To elucidate these dependencies, we present a workflow utilizing random matrix theory on metagenome-assembled genomes to construct co-occurrence and complementarity networks. We apply this approach temperature gradient hot spring, unraveling the interplay between thermal stress cooperation. Our analysis reveals an increase in frequency of with rising temperatures. Amino acids, coenzyme A derivatives,...
Assessing the risk of human pathogens in environment is crucial for controlling spread diseases and safeguarding health. However, conducting a thorough assessment low-abundance highly complex environmental microbial communities remains challenging. This study compiled comprehensive catalog 247 human-pathogenic bacterial taxa from global biosafety agencies identified more than 78 million genome-specific markers (GSMs) their 17,470 sequenced genomes. Subsequently, we analyzed these pathogens'...
Abstract With the widespread adoption of metagenomic sequencing, new perspectives have emerged for studying microbial ecological networks, yielding metabolic evidence interspecies interactions that traditional co‐occurrence networks cannot infer. This protocol introduces integrated Network Analysis Pipeline 2.0 (iNAP 2.0), which features an innovative complementarity network studies from metagenomics sequencing data. iNAP sets up a four‐module process interaction analysis, namely: (I)...
Wetlands are natural sources of methane (CH
The study was designed to: (1) investigate the prevalence of high-risk human papillomavirus (HR- HPV) infection and cervical neoplasia; (2) evaluate clinical performance visual inspection with acetic acid/ Lugol's iodine (VIA /VILI), Pap smear, (HR-HPV) DNA test for detecting intraepithelial neoplasia grade 2 or worse (CIN2+) (3) explore appropriate screening approach in rural areas Shandong Province.A total 3,763 eligible women from Yiyuan County Yimeng mountainous Shandong, China, were...