Kiarod Pashminehazar

ORCID: 0009-0007-4824-8733
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About
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Research Areas
  • CRISPR and Genetic Engineering
  • RNA and protein synthesis mechanisms
  • Genomics and Phylogenetic Studies

University of California, Los Angeles
2024

DNA sequencing continues to get cheaper and faster. In parallel, algorithmic innovations have allowed inference of a wide range nuclear, mitochondrial, somatic evolutionary from data. To make automated, high-quality more readily available, we created an extensible Nextflow meta-pipeline called metapipeline-DNA. Metapipeline-DNA supports processing raw reads through alignment, variant detection, quality control subclonal reconstruction. Each step quality-control, data-visualization multiple...

10.1101/2024.09.04.611267 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2024-09-07
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