Emily M Phillips

ORCID: 0000-0001-7615-301X
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About
Contact & Profiles
Research Areas
  • Neurobiology and Insect Physiology Research
  • Insect and Arachnid Ecology and Behavior
  • Animal Behavior and Reproduction
  • Phonetics and Phonology Research
  • Plant and Biological Electrophysiology Studies
  • Genetics, Aging, and Longevity in Model Organisms
  • Avian ecology and behavior
  • Species Distribution and Climate Change
  • Voice and Speech Disorders
  • Wildlife Ecology and Conservation
  • Hearing Loss and Rehabilitation
  • Speech Recognition and Synthesis
  • Neural dynamics and brain function
  • Genetics, Bioinformatics, and Biomedical Research
  • Marine and fisheries research
  • Science Education and Perceptions
  • Marine animal studies overview
  • CCD and CMOS Imaging Sensors
  • Wildlife-Road Interactions and Conservation
  • Forest Insect Ecology and Management
  • Advanced Memory and Neural Computing
  • Animal Ecology and Behavior Studies
  • Language Development and Disorders
  • Climate variability and models
  • Coral and Marine Ecosystems Studies

Janelia Research Campus
2020-2025

Howard Hughes Medical Institute
2020-2025

Bangor University
2024

University of California, Davis
2022

Los Alamos National Laboratory
2016-2021

Haskins Laboratories
2017-2019

C. Shan Xu Michał Januszewski Zhiyuan Lu Shin-ya Takemura Kenneth J. Hayworth and 95 more Gary B. Huang Kazunori Shinomiya Jeremy Maitin-Shepard David Ackerman Stuart Berg Tim Blakely John Bogovic Jody Clements Tom Dolafi Philip M. Hubbard Dagmar Kainmueller William Katz Takashi Kawase Khaled Khairy Laramie Leavitt Peter H. Li Larry F. Lindsey Nicole Neubarth Donald J. Olbris Hideo Otsuna Eric T. Troutman Lowell Umayam Ting Zhao Masayoshi Ito Jens Goldammer Tanya Wolff Robert Svirskas Philipp Schlegel Erika Neace Christopher Knecht Chelsea X. Alvarado Dennis Bailey Samantha Ballinger J Borycz Brandon S Canino Natasha Cheatham Michael Cook Marisa Dreher Octave Duclos Bryon Eubanks Kelli Fairbanks Samantha Finley-May Nora Forknall Audrey Francis Gary Patrick Hopkins Emily Joyce SungJin Kim Nicole Kirk Julie Kovalyak Shirley A Lauchie Alanna Lohff Charli Maldonado Emily A Manley Sari McLin Caroline Mooney Miatta Ndama Omotara Ogundeyi Nneoma Okeoma Christopher Ordish Nicholas Padilla Christopher Patrick Tyler Paterson Elliott Phillips Emily M Phillips Neha Rampally Caitlin Ribeiro Madelaine K Robertson Jon Thomson Rymer Sean M Ryan Megan Sammons Anne K Scott Ashley L Scott Aya Shinomiya Claire Smith Kelsey Smith Natalie Smith Margaret A. Sobeski Alia Suleiman Jackie Swift Satoko Takemura Iris Talebi Dorota Tarnogorska Emily Tenshaw Temour Tokhi John J Walsh Tansy Yang Jane Anne Horne Feng Li Ruchi Parekh Patricia K. Rivlin Vivek Jayaraman Kei Ito Stephan Saalfeld Reed George Ian A. Meinertzhagen

Abstract The neural circuits responsible for behavior remain largely unknown. Previous efforts have reconstructed the complete of small animals, with hundreds neurons, and selected larger animals. Here we (the FlyEM project at Janelia collaborators Google) summarize new methods present circuitry a large fraction brain much more complex animal, fruit fly Drosophila melanogaster . Improved include procedures to prepare, image, align, segment, find synapses, proofread such data sets; that...

10.1101/2020.01.21.911859 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-01-21

Abstract Animal behavior is principally expressed through neural control of muscles. Therefore understanding how the brain controls requires mapping neuronal circuits all way to motor neurons. We have previously established technology collect large-volume electron microscopy data sets tissue and fully reconstruct morphology neurons their chemical synaptic connections throughout volume. Using these tools we generated a dense wiring diagram, or connectome, for large portion Drosophila central...

10.1101/2023.06.05.543757 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2023-06-06

Animal behavior is principally expressed through neural control of muscles. Therefore understanding how the brain controls requires mapping neuronal circuits all way to motor neurons. We have previously established technology collect large-volume electron microscopy data sets tissue and fully reconstruct morphology neurons their chemical synaptic connections throughout volume. Using these tools we generated a dense wiring diagram, or connectome, for large portion Drosophila central brain....

10.7554/elife.97769.1 preprint EN 2024-05-23

Vision provides animals with detailed information about their surroundings, conveying diverse features such as color, form, and movement across the visual scene. Computing these parallel spatial requires a large network of neurons, that in distant flies humans, regions comprise half brain's volume. These brain often reveal remarkable structure-function relationships, neurons organized along maps shapes directly relate to roles processing. To unravel stunning diversity complex system, careful...

10.1101/2024.04.16.589741 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-04-18

Abstract Vision provides animals with detailed information about their surroundings and conveys diverse features such as colour, form movement across the visual scene. Computing these parallel spatial requires a large network of neurons. Consequently, from flies to humans, regions in brain constitute half its volume. These often have marked structure–function relationships, neurons organized along maps shapes that directly relate roles processing. More than century anatomical studies...

10.1038/s41586-025-08746-0 article EN cc-by Nature 2025-03-26
Louis K. Scheffer C. Shan Xu Michał Januszewski Zhiyuan Lu Shin-ya Takemura and 95 more Kenneth J. Hayworth Gary B. Huang Kazunori Shinomiya Jeremy Maitin-Shepard Stuart Berg Jody Clements Philip M. Hubbard William Katz Lowell Umayam Ting Zhao David Ackerman Tim Blakely John Bogovic Tom Dolafi Dagmar Kainmueller Takashi Kawase Khaled Khairy Laramie Leavitt Peter H. Li Larry F. Lindsey Nicole Neubarth Donald J. Olbris Hideo Otsuna Eric T. Trautman Masayoshi Ito Jens Goldammer Tanya Wolff Robert Svirskas Philipp Schlegel Erika Neace Christopher J Knecht Chelsea X. Alvarado Dennis Bailey Samantha Ballinger J Borycz Brandon S Canino Natasha Cheatham Michael Cook Marisa Dreher Octave Duclos Bryon Eubanks Kelli Fairbanks Samantha Finley-May Nora Forknall Audrey Francis Gary Patrick Hopkins Emily Joyce Sungjin Kim Nicole Kirk Julie Kovalyak Shirley A Lauchie Alanna Lohff Charli Maldonado Emily A Manley Sari McLin Caroline Mooney Miatta Ndama Omotara Ogundeyi Nneoma Okeoma Christopher Ordish Nicholas Padilla Christopher Patrick Tyler Paterson Elliott Phillips Emily M Phillips Neha Rampally Caitlin Ribeiro Madelaine K Robertson Jon Thomson Rymer Sean M Ryan Megan Sammons Anne K Scott Ashley L Scott Aya Shinomiya Claire Smith Kelsey Smith Natalie Smith Margaret A. Sobeski Alia Suleiman Jackie Swift Satoko Takemura Iris Talebi Dorota Tarnogorska Emily Tenshaw Temour Tokhi John J Walsh Tansy Yang Jane Anne Horne Feng Li Ruchi Parekh Patricia K. Rivlin Vivek Jayaraman Kei Ito Stephan Saalfeld Reed George

Abstract The neural circuits responsible for animal behavior remain largely unknown. We summarize new methods and present the circuitry of a large fraction brain fruit fly Drosophila melanogaster. Improved include procedures to prepare, image, align, segment, find synapses in, proofread such data sets. define cell types, refine computational compartments, provide an exhaustive atlas examples many them novel. detailed consisting neurons their chemical most central brain. make public simplify...

10.1101/2020.04.07.030213 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2020-04-09

Diagnostic ultrasound imaging has been a common tool in medical practice for several decades. It provides safe and effective method structures internal to the body. There recent increase use of technology visualize shape movements tongue during speech, both typical speakers clinical populations. Ultrasound speech greatly expanded our understanding how sounds articulated with (lingual sounds) are produced. Such information can be particularly valuable speech-language pathologists. Among other...

10.3791/55123 article EN Journal of Visualized Experiments 2017-01-03

Diagnostic ultrasound imaging has been a common tool in medical practice for several decades. It provides safe and effective method structures internal to the body. There recent increase use of technology visualize shape movements tongue during speech, both typical speakers clinical populations. Ultrasound speech greatly expanded our understanding how sounds articulated with (lingual sounds) are produced. Such information can be particularly valuable speech-language pathologists. Among other...

10.3791/55123-v article EN Journal of Visualized Experiments 2017-01-03

Purpose The aim of the study was to examine how ultrasound visual feedback (UVF) treatment impacts speech sound learning in children with residual errors affecting /ɹ/. Method Twelve children, ages 9-14 years, received for vocalic /ɹ/ a multiple-baseline across-subjects design comparing 8 sessions UVF and traditional (no-biofeedback) treatment. All participants were exposed both conditions, order counterbalanced across participants. To monitor progress, naïve listeners rated accuracy...

10.1044/2019_ajslp-18-0261 article EN American Journal of Speech-Language Pathology 2019-06-06

Purpose The aim of this study was to explore how the frequency with which ultrasound visual feedback (UVF) is provided during speech therapy affects sound learning. Method Twelve children residual errors affecting /ɹ/ participated in a multiple-baseline across-subjects design 2 treatment conditions. One condition featured 8 hr high-frequency UVF (HF; on 89% trials), whereas other included lower-frequency (LF; 44% trials). order conditions counterbalanced across participants. All participants...

10.1044/2018_jslhr-s-17-0441 article EN Journal of Speech Language and Hearing Research 2018-07-30

Animal behavior is principally expressed through neural control of muscles. Therefore understanding how the brain controls requires mapping neuronal circuits all way to motor neurons. We have previously established technology collect large-volume electron microscopy data sets tissue and fully reconstruct morphology neurons their chemical synaptic connections throughout volume. Using these tools we generated a dense wiring diagram, or connectome, for large portion Drosophila central brain....

10.7554/elife.97769 preprint EN 2024-05-23

Abstract Baited static gear fisheries targeting benthic invertebrates have expanded at a global scale. While improvements been made in the monitoring and management of these fisheries, reliable survey methods for stock assessments many key species are lacking. In this study we examine viability baited remote underwater video (BRUV) system obtaining abundance indices data-limited (common whelk, Buccinum undatum), compare method to catch per unit effort (CPUE) from commercial fishing. BRUVs...

10.1093/icesjms/fsae127 article EN cc-by ICES Journal of Marine Science 2024-08-28

Abstract American barn owls ( Tyto furcata ) often rely on nest box networks for breeding, especially within agricultural landscapes. Nest boxes are commonly installed pest management purposes and require regular maintenance, such as removal of pellet debris repairs, to remain functional safe breeding owls. Ideally, maintenance should be conducted before the season begins minimize disturbance. The timing owl is important understand in California, USA, which has a high diversity ecoregions...

10.1002/jwmg.22278 article EN Journal of Wildlife Management 2022-06-16

Abstract Background Accurate nestling age is valuable for studies on nesting strategies, productivity, and impacts reproductive success. Most aging guides consist of descriptions photographs that are time consuming to read subjective interpret. The Western Bluebird ( Sialia mexicana ) a secondary cavity-nesting passerine nests in coniferous open deciduous forests. Nest box programs species have provided suitable locations opportunities data collection growth development. Methods We developed...

10.1186/s40657-021-00258-5 article EN cc-by Avian Research 2021-06-02
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