A5101934530- Genomics and Phylogenetic Studies
- Genetic diversity and population structure
- Species Distribution and Climate Change
- Freezing and Crystallization Processes
- Plant and Fungal Species Descriptions
- RNA and protein synthesis mechanisms
- Magnetic and Electromagnetic Effects
- Natural product bioactivities and synthesis
- Calcium Carbonate Crystallization and Inhibition
- Plant biochemistry and biosynthesis
- Microbial Inactivation Methods
- Plant Gene Expression Analysis
- Traditional Chinese Medicine Analysis
- Ecology and Vegetation Dynamics Studies
- Machine Learning in Bioinformatics
- Chemical Reactions and Isotopes
- Genomics and Chromatin Dynamics
- RNA modifications and cancer
- Plant nutrient uptake and metabolism
- Plant Diversity and Evolution
- RNA Research and Splicing
- Plant Molecular Biology Research
- Plant Disease Resistance and Genetics
- Epigenetics and DNA Methylation
- Fractal and DNA sequence analysis
Xi'an Botanical Garden of Shaanxi Province
2022-2025
Institute of Botany
2022-2025
China University of Petroleum, East China
2025
China Energy Engineering Corporation (China)
2025
Inner Mongolia University of Technology
2018-2024
Ningbo University of Technology
2024
Zhejiang Sci-Tech University
2024
China University of Geosciences
2023
Northwest University
2015-2023
Ministry of Education of the People's Republic of China
2015-2023
Gentiana section Cruciata is widely distributed across Eurasia at high altitudes, and some species in this are used as traditional Chinese medicine. Accurate identification of these important for their utilization conservation. Due to similar morphological chemical characteristics, correct discrimination still remains problematic. Here, we sequenced three complete chloroplast (cp) genomes (G. dahurica, G. siphonantha officinalis). We further compared them with the previously published...
Electrohydrodynamic (EHD) drying, natural air drying (AD) and hot (HAD) were used to comprehensively study the characteristics physicochemical properties of garlic, low-field nuclear magnetic resonance (NMR), infrared spectroscopy, scanning electron microscopy other technologies as detection methods. In terms characteristics, HAD has largest effective diffusion coefficient moisture shortest average time. EHD-treated garlic slices had most attractive color, highest rehydration rate, stable...
Invertase (INV, EC3.2.1.26) is widely recognized as an indispensable enzyme for catalyzing sucrose degradation and plays a central role in plant growth well fruit quality improvement. However, no systematic study has been performed kiwifruit. Here, we identified 102 AaINV genes the Actinidia arguta "M1" genome. Their physical chemical properties, subcellular localizations, phylogenetic relationships expression profiles were characterized. Phylogenetic analysis showed that INV members...
Changium smyrnioides, an endangered herb known for its medicinal roots, contains essential amino acids that are vital human health but cannot be synthesized by the body. However, wild populations of this species have been steadily declining due to combined impacts climate change and anthropogenic activities. In study, we employed optimized MaxEnt model predict potential distribution C. smyrnioides under different scenarios evaluate responses change. Our findings demonstrated achieved optimal...
Aceraceae is a large forest tree family that comprises many economically and ecologically important species. However, because interspecific and/or intraspecific morphological variations result from frequent hybridization introgression, it challenging for non-taxonomists to accurately recognize identify the species in based on traditional approach. DNA barcoding powerful tool has been proposed distinguish between In this study, we assessed effectiveness of three core standard markers (matK,...
The lacquer tree (Toxicodendron vernicifluum (Stokes) F.A. Barkley) is an important with economic, industrial, and medicinal values. Here, we generated the reference genome of T. at chromosome level 491.93 Mb in size, which 98.26% assembled contigs were anchored onto 15 pseudochromosomes scaffold N50 32.97 Mb. Comparative genomic analysis revealed gene families related to urushiol biosynthesis expanded, contributing ecological fitness biological adaptability tree. We combined multi-omics...
Mountain uplift and climatic fluctuations are important driving forces that have affected the geographic distribution population dynamics history of organisms. However, it is unclear how geological events might phylogeographic species divergence in high-alpine herbal plants. In this study, we analyzed demographic differentiation four endangered Notopterygium herbs on high-altitude Qinghai–Tibetan Plateau (QTP) adjacent areas. We combined analysis with modeling to detect genetic variations...
The extreme conditions (e.g., cold, low oxygen, and strong ultraviolet radiation) of the high mountains provide an ideal natural laboratory for studies on speciation adaptive evolution organisms. Up to now, few genome/transcriptome-based have been carried out how plants adapt at extremely altitudes. Notopterygium incisum franchetii (Notopterygium, Apiaceae) are two endangered high-alpine herbal endemic China. To explore molecular genetic mechanisms adaptation altitudes, we performed...
Abstract Many natural systems are subject to profound and persistent anthropogenic influence. Human‐induced gene movement through afforestation the selective transportation of genotypes might enhance potential for intraspecific hybridization, which could lead outbreeding depression. However, evolutionary legacy on spatial genetic structure forest tree species has barely been investigated. To do this properly, effects processes must be examined simultaneously. A multidisciplinary approach,...
Globally, increasing temperatures due to climate change have severely affected natural ecosystems in several regions of the world; however, impact on alpine plant may be particularly profound, further raising risk extinction for rare and endangered plants. To identify how species responded past predict potential geographic distribution under future change, we investigated records A. chensiensis, an Qinling Mountains listed Red List. In this study, optimized MaxEnt model was used analyse key...
The genus Rorippa belongs to the family Brassicaceae, and its members usually have high medicinal value. consists of approximately 75 species mainly grows in Northern Hemisphere, occurring every continent except Antarctica. taxonomy phylogenetic relationships are still unsettled, largely due complex morphological variations Rorippa, which were caused by frequent hybridization events. Here, we sequenced four complete plastid genomes Illumina paired-end sequencing. new ranged total size from...
Aromatic sulfones are the prevailing scaffolds in pharmaceutical and material sciences. However, compared to their widespread application, selective deuterium labeling of these structures is restricted due electron-deficient properties. This study presents two comprehensive strategies for deuteration aromatic sulfones. The base-promoted uses DMSO-d6 as source, resulting a rapid H/D exchange within 2 h. Meanwhile, silver-catalyzed protocol offers much milder option by using economical D2O...
The sex determination in gymnosperms is still poorly characterized due to the lack of genomic/transcriptome resources and useful molecular genetic markers. To enhance our understanding mechanisms sexual recognition reproductive structures conifers, transcriptome male female conelets were a Chinese endemic conifer species, Pinus bungeana Zucc. ex Endl. 39.62 Gb high-throughput sequencing reads obtained from two kinds conelets. After de novo assembly reads, 85,305 unigenes identified, 53,944...
Within two years of their discovery in 1977, introns were found to have a positive effect on gene expression. Our result shows that can achieve expression and regulation through interaction with corresponding mRNA sequences. On the base Smith-Waterman method, local comparing helps us get optimal matched segments between intron sequences Studying distribution matching region ribosomal protein genes about 27 species, we find length evolution processes beginning from 5′ end 3′ increasing one by...
Historical geological and climatic events are the most important drivers of population expansions/contractions, range shifts, interspecific divergence in plants. However, species spatiotemporal dynamics alpine cold-tolerant herbal plants high-altitude Qinghai-Tibetan Plateau (QTP) adjacent areas remain poorly understood. In this study, we investigated evolutionary history four endangered Notopterygium herb QTP regions. We sequenced 10 nuclear loci, 2 mitochondrial DNA regions, 4 chloroplast...
Notopterygium incisum C. Ting ex H. T. Chang (Apiaceae) is an endangered perennial herb in China. The lack of transcriptomic and genomic resources for N. greatly hinders studies its population genetics conservation. In this study, we employed RNA-seq technology to characterize transcriptomes the flowers, leaves, stems herb. A total 56 million clean reads were assembled into 120,716 unigenes with N50 length 850 bp. Among these unigenes, 70,245 (58.19%) successfully annotated 65,965 (54.64%)...
AbstractAcer morrisonense (Aceraceae) is an important forest tree species and endemic to Taiwan area. In this study, we determined the complete nucleotide sequence of A. chloroplast genome (cpDNA) by using next-generation sequencing. The cpDNA was 157 197 bp in size, contained a pair 26 728 inverted repeat (IR) regions, which were separated large single copy region (LSC) small (SSC) 85 655 18 086 bp, respectively. 134 genes, including 86 protein-coding genes (78 PCG species), 8 ribosomal RNA...