Timon Beck

ORCID: 0000-0001-8529-5079
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About
Contact & Profiles
Research Areas
  • Cellular Mechanics and Interactions
  • Advanced Fluorescence Microscopy Techniques
  • Microfluidic and Bio-sensing Technologies
  • Digital Holography and Microscopy
  • 3D Printing in Biomedical Research
  • Spectroscopy Techniques in Biomedical and Chemical Research
  • Tendon Structure and Treatment
  • Nerve injury and regeneration
  • Signaling Pathways in Disease
  • Osteoarthritis Treatment and Mechanisms
  • Proteoglycans and glycosaminoglycans research
  • Acoustic Wave Resonator Technologies
  • Mechanical and Optical Resonators
  • Heat shock proteins research
  • Sports Dynamics and Biomechanics
  • Spaceflight effects on biology
  • RNA Research and Splicing
  • Advanced Materials and Mechanics
  • Corneal Surgery and Treatments
  • Photoacoustic and Ultrasonic Imaging
  • Protein Structure and Dynamics
  • Advanced MEMS and NEMS Technologies
  • Advanced Sensor and Energy Harvesting Materials
  • Hydrogels: synthesis, properties, applications
  • Connective tissue disorders research

TU Dresden
2018-2024

Max Planck Institute for the Science of Light
2020-2024

Center for Systems Biology Dresden
2021

Biotechnology Research Center
2020

Quantitative measurements of physical parameters become increasingly important for understanding biological processes. Brillouin microscopy (BM) has recently emerged as one technique providing the 3D distribution viscoelastic properties inside samples − so far relying on implicit assumption that refractive index (RI) and density can be neglected. Here, we present a novel method (FOB microscopy) combining BM with optical diffraction tomography epifluorescence imaging explicitly measuring...

10.7554/elife.68490 article EN cc-by eLife 2022-01-10

Extracellular matrix (ECM) deposition after central nervous system (CNS) injury leads to inhibitory scarring in humans and other mammals, whereas it facilitates axon regeneration the zebrafish. However, molecular basis of these different fates is not understood. Here, we identify small leucine-rich proteoglycans (SLRPs) as a contributing factor failure mammals. We demonstrate that SLRPs chondroadherin, fibromodulin, lumican, prolargin are enriched rodent human but zebrafish CNS lesions....

10.1038/s41467-023-42339-7 article EN cc-by Nature Communications 2023-10-26

Altered biophysical properties of cancer cells and their microenvironment contribute to progression. While the relationship between microenvironmental stiffness cell mechanical responses has been previously studied using two-dimensional (2D) systems, much less is known about it in a physiologically more relevant 3D context particular for multicellular systems. To investigate influence on tumor spheroid mechanics, we first generated MCF-7 spheroids within matrix metalloproteinase...

10.3390/cancers13215549 article EN Cancers 2021-11-05

The quantification of physical properties biological matter gives rise to novel ways understanding functional mechanisms. One the basic biophysical is mass density (MD). It affects dynamics in sub-cellular compartments and plays a major role defining opto-acoustical cells tissues. As such, MD can be connected refractive index (RI) via well known Lorentz-Lorenz relation, which takes into account polarizability matter. However, computing based on RI measurements poses challenge, as it requires...

10.1016/j.bpr.2024.100156 article EN cc-by Biophysical Reports 2024-04-24

Optical quantification of intracellular mass density using optical diffraction tomography (ODT) and cell mechanics Brillouin spectroscopy under 3D mechanical confinement.

10.1039/d0sm01556c article EN cc-by Soft Matter 2020-11-20

Biomolecular condensates have been identified as a ubiquitous means of intracellular organization, exhibiting very diverse material properties. However, techniques to characterize these properties and their underlying molecular interactions are scarce. Here, we introduce two optical - Brillouin microscopy quantitative phase imaging (QPI) address this scarcity. We establish shift linewidth measures for average interaction dissipation strength, respectively, used QPI obtain the protein...

10.1091/mbc.e24-03-0128 article EN Molecular Biology of the Cell 2024-11-13

In processes such as development and regeneration, where large cellular tissue rearrangements occur, cell fate behaviour are strongly influenced by mechanics. While most well-established tools probing mechanical properties require an invasive sample preparation, confocal Brillouin microscopy captures parameters optically with high resolution in a contact-free label-free fashion. this work, we took advantage of tool the transparency highly regenerative axolotl to probe its vivo for first...

10.1098/rsob.220078 article EN cc-by Open Biology 2022-06-01

Stretching living cells with light is a key method to assess their mechanics. To estimate the heat, experience during this procedure, microgels are utilized relate temperature changes – caused by optical stretchers hydrogel swelling.

10.1039/d2ma00296e article EN cc-by-nc Materials Advances 2022-01-01

The quantification of physical properties biological matter gives rise to novel ways understanding functional mechanisms by utilizing models that explicitly depend on observables. One the basic biophysical is mass density (MD), which determines degree crowdedness. It impacts dynamics in sub-cellular compartments and further plays a major role defining opto-acoustical cells tissues. As such, MD can be connected refractive index (RI) via well known Lorentz-Lorenz relation, takes into account...

10.1101/2023.12.05.569868 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-12-05

Abstract Quantitative measurements of physical parameters become increasingly important for understanding biological processes. Brillouin microscopy (BM) has recently emerged as one technique providing the 3D distribution viscoelastic properties inside samples — so far relying on implicit assumption that refractive index (RI) and density can be neglected. Here, we present a novel method (FOB microscopy) combining BM with optical diffraction tomography epi-fluorescence imaging explicitly...

10.1101/2020.10.30.361808 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-10-30

Abstract Altered biophysical properties of cancer cells and their microenvironment contribute to progression. While the relationship between microenvironmental stiffness cell mechanical responses has been previously studied using two-dimensional (2D) systems, much less is known about it in a physiologically more relevant 3D context particular for multicellular systems. To investigate influence on tumor spheroid mechanics, we first generated MCF-7 spheroids within matrix metalloproteinase...

10.1101/2021.10.12.464071 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2021-10-13

Abstract Biomolecular condensates have been identified as a ubiquitous means of intracellular organization, exhibiting very diverse material properties. However, techniques to characterize these properties and their underlying molecular interactions are scarce. Here, we introduce two optical – Brillouin microscopy quantitative phase imaging (QPI) address this scarcity. We establish shift linewidth measures for average interaction dissipation strength, respectively, used QPI obtain the...

10.1101/2024.03.19.585750 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-03-22

ABSTRACT In processes such as development and regeneration, where large cellular tissue rearrangements occur, cell fate behavior are strongly influenced by mechanics. While most well-established tools probing mechanical properties require an invasive sample preparation, confocal Brillouin microscopy captures parameters optically with high resolution in a contact-free label-free fashion. this work, we took advantage of tool the transparency highly regenerative axolotl to probe its vivo for...

10.1101/2022.03.01.482501 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-03-04

ABSTRACT Extracellular matrix (ECM) deposition after central nervous system (CNS) injury leads to inhibitory scarring in mammals, whereas it facilitates axon regeneration the zebrafish. However, molecular basis of these different fates is not understood. Here, we identify small leucine-rich proteoglycans (SLRPs) as a causal factor failure. We demonstrate that SLRPs Chondroadherin, Fibromodulin, Lumican, and Prolargin are enriched human, but zebrafish, CNS lesions. Targeting zebrafish ECM...

10.1101/2022.11.21.517128 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-11-22

We present a combined optical system for Brillouin microscopy with diffraction tomography (ODT), which can reconstruct the three-dimensional refractive index (RI) distribution of biological samples. By correlating frequency shift reconstructed RI in same field-of-view, we calculate precise longitudinal modulus samples without priori information. demonstrate capabilities method using cell phantom consisting different hydrogel beads known mechanical properties, and apply it to quantitative...

10.1117/12.2546448 article EN 2020-03-11
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