Judith Staerk

ORCID: 0000-0001-8698-6998
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About
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Research Areas
  • Myeloproliferative Neoplasms: Diagnosis and Treatment
  • CRISPR and Genetic Engineering
  • Pluripotent Stem Cells Research
  • Cytokine Signaling Pathways and Interactions
  • Platelet Disorders and Treatments
  • Eosinophilic Disorders and Syndromes
  • Lipid metabolism and disorders
  • Chronic Myeloid Leukemia Treatments
  • Kruppel-like factors research
  • Renal and related cancers
  • Mitochondrial Function and Pathology
  • Chronic Lymphocytic Leukemia Research
  • RNA regulation and disease
  • Genetics, Aging, and Longevity in Model Organisms
  • Tissue Engineering and Regenerative Medicine
  • Biomedical Ethics and Regulation
  • 3D Printing in Biomedical Research
  • Epigenetics and DNA Methylation
  • interferon and immune responses
  • Microtubule and mitosis dynamics
  • Osteoarthritis Treatment and Mechanisms
  • Renal Diseases and Glomerulopathies
  • Folate and B Vitamins Research
  • ATP Synthase and ATPases Research
  • Endoplasmic Reticulum Stress and Disease

University of Oslo
2012-2023

Ludwig Cancer Research
2003-2023

de Duve Institute
2003-2023

UCLouvain
2005-2023

Walloon Excellence in Lifesciences and Biotechnology
2023

Oslo University Hospital
2012-2021

Whitehead Institute for Biomedical Research
2008-2011

Massachusetts Institute of Technology
2009-2011

Inserm
2005

Ectopic expression of defined transcription factors can reprogram somatic cells to induced pluripotent stem (iPS) cells, but the utility iPS is hampered by use viral delivery systems. Small molecules offer an alternative replace virally transduced with chemical signaling cues responsible for reprogramming. In this report we describe a small-molecule screening platform applied identify compounds that functionally reprogramming factor Klf4. A series scaffolds were identified activate Nanog in...

10.1073/pnas.0903860106 article EN Proceedings of the National Academy of Sciences 2009-05-16

Endoplasmic reticulum (ER) stress is thought to activate autophagy via unfolded protein response (UPR)-mediated transcriptional up-regulation of machinery components and modulation microtubule-associated 1 light chain 3 (LC3). The upstream UPR constituents pancreatic EIF2-α kinase (PERK) inositol-requiring enzyme (IRE1) have been reported mediate these effects, suggesting that may stimulate PERK IRE1. However, how the its affect autophagic activity has not thoroughly examined. By analyzing...

10.1074/jbc.ra118.002829 article EN cc-by Journal of Biological Chemistry 2019-03-29

The thrombopoietin receptor (TpoR) regulates hematopoietic stem cell renewal, megakaryocyte differentiation, and platelet formation. TpoR signals by activating Janus kinases JAK2 Tyk2. Here we show that, in addition to signaling downstream from the activated TpoR, Tyk2 strongly promote surface localization enhance total protein levels of TpoR. This effect is caused stabilization mature endoglycosidase H-resistant form receptor. Confocal microscopy indicates that colocalizes partially with...

10.1074/jbc.m501376200 article EN cc-by Journal of Biological Chemistry 2005-05-18

The majority of polycythemia vera (PV) patients harbor a unique somatic mutation (V617F) in the pseudokinase domain JAK2, which leads to constitutive signaling. Here we show that homologous mutations JAK1 (V658F) and Tyk2 (V678F) lead activation these kinases. Their expression induces autonomous growth cytokine-dependent cells STAT5, STAT3, mitogen-activated protein kinase, Akt signaling Ba/F3 cells. mutant JAKs exhibit also when expressed fibrosarcoma deficient JAK proteins. Expression JAK2...

10.1074/jbc.c500358200 article EN cc-by Journal of Biological Chemistry 2005-10-26

Activating mutations in JAK1 have been reported acute lymphoblastic leukemias, but little is known about the mechanisms involved their constitutive activation. Here, we studied ability of V658F and A634D to activate Janus kinase (JAK)/STAT pathway upon ectopic expression HEK293 cells alone or together with other components interleukin-9 receptor complex (IL-9Rα, γc, JAK3). Expression mutants failed trigger STAT activation, co-expression IL-9Rα chain promoted mutant phosphorylation Mutation...

10.1074/jbc.m807531200 article EN cc-by Journal of Biological Chemistry 2009-01-13

Small molecules do the job: Somatic cells are reprogrammed into iPS upon ectopic expression of Oct4, Sox2, Klf4 and c-Myc. Application a cell-based, high-throughput chemical screen led to identification Src family kinase (SFK) inhibitors as replacements for retroviral Sox2 delivery. These compounds used study mechanisms underlying direct reprogramming may ultimately help bring cell technology one step closer clinical application.

10.1002/anie.201101042 article EN Angewandte Chemie International Edition 2011-05-05

The concentration of thiol and thioether metabolites in plasma has diagnostic value genetic diseases B-vitamin metabolism linked to methionine utilization. Among these, cysteine/cystine (Cys/CSSC) glutathione/oxidized glutathione (GSH/GSSG) act as cellular redox buffers. A new LC-MS/MS method was developed for the simultaneous detection cystathionine (Cysta), (Met), sulfoxide (MSO), creatinine reduced oxidized pairs homocysteine (Hcy/HSSH), cysteine (GSH/GSSG). one-step thiol-blocking...

10.3390/metabo9100235 article EN cc-by Metabolites 2019-10-18

Optic atrophy 1 (OPA1), a GTPase at the inner mitochondrial membrane involved in regulating fusion, stability, and energy output, is known to be crucial for neural development: Opa1 heterozygous mice show abnormal brain development, inactivating mutations OPA1 are linked human neurological disorders. Here, we used genetically modified embryonic patient-derived induced pluripotent stem cells reveal that haploinsufficiency leads aberrant nuclear DNA methylation significantly alters...

10.1016/j.isci.2020.101154 article EN cc-by-nc-nd iScience 2020-05-11

Hematopoietic stem cell renewal and differentiation are regulated through epigenetic processes. The conversion of 5-methylcytosine into 5-hydroxymethylcytosine (5hmC) by ten-eleven-translocation enzymes provides new insights the regulation gene expression during development. Here, we studied potential regulatory role 5hmC human hematopoiesis. We used reduced representation profiling (RRHP) to characterize distribution in CD34+ cells, CD4+ T CD19+ B CD14+ monocytes granulocytes. In all...

10.1186/s13072-016-0070-8 article EN cc-by Epigenetics & Chromatin 2016-05-31
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