Caroline Kisker

ORCID: 0000-0002-0216-6026
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • DNA Repair Mechanisms
  • Enzyme Structure and Function
  • DNA and Nucleic Acid Chemistry
  • Metalloenzymes and iron-sulfur proteins
  • Tuberculosis Research and Epidemiology
  • Bacterial Genetics and Biotechnology
  • RNA modifications and cancer
  • RNA and protein synthesis mechanisms
  • Biochemical and Molecular Research
  • Ubiquitin and proteasome pathways
  • CRISPR and Genetic Engineering
  • Porphyrin Metabolism and Disorders
  • Antibiotic Resistance in Bacteria
  • Computational Drug Discovery Methods
  • Genomics and Chromatin Dynamics
  • Enzyme function and inhibition
  • Microbial Natural Products and Biosynthesis
  • Antimicrobial agents and applications
  • Cancer therapeutics and mechanisms
  • Metal-Catalyzed Oxygenation Mechanisms
  • Advanced biosensing and bioanalysis techniques
  • Reproductive tract infections research
  • Chemical Synthesis and Analysis
  • Polyamine Metabolism and Applications
  • Electrocatalysts for Energy Conversion

University of Würzburg
2015-2025

Stony Brook University
2000-2021

University of Zurich
2021

TU Dortmund University
2021

Columbia University
2021

Comprehensive Cancer Center Mainfranken
2014-2020

Universitätsklinikum Würzburg
2020

Centre Virchow-Villermé
2016

Deutsche Forschungsgemeinschaft
2014

Institut de Biologie Moléculaire et Cellulaire
2014

The molybdoenzyme dimethylsulfoxide (DMSO) reductase contributes to the release of dimethylsulfide, a compound that has been implicated in cloud nucleation and global climate regulation. crystal structure DMSO from Rhodobacter sphaeroides reveals monooxo molybdenum cofactor containing two molybdopterin guanine dinucleotides asymmetrically coordinate through their dithiolene groups. One pterins exhibits different coordination modes between oxidized reduced states, whereas side chain oxygen...

10.1126/science.272.5268.1615 article EN Science 1996-06-14

Protein-protein interactions play critical roles in biology, but the structures of many eukaryotic protein complexes are unknown, and there likely not yet identified. We take advantage advances proteome-wide amino acid coevolution analysis deep-learning–based structure modeling to systematically identify build accurate models core within

10.1126/science.abm4805 article EN Science 2021-11-11

The most frequently occurring resistance of Gram-negative bacteria against tetracyclines is triggered by drug recognition the Tet repressor. This causes dissociation repressor-operator DNA complex and enables expression protein TetA, which responsible for active efflux tetracycline. 2.5 angstrom resolution crystal structure homodimeric repressor complexed with tetracycline-magnesium reveals detailed recognition. orientation operator-binding helix-turn-helix motifs inverted in comparison...

10.1126/science.8153629 article EN Science 1994-04-15

Novel chemotherapeutics for treating multidrug-resistant (MDR) strains of Mycobacterium tuberculosis (MTB) are required to combat the spread tuberculosis, a disease that kills more than 2 million people annually. Using structure-based drug design, we have developed series alkyl diphenyl ethers uncompetitive inhibitors InhA, enoyl reductase enzyme in MTB fatty acid biosynthesis pathway. The most potent compound has Ki' value 1 nM InhA and MIC99 values 2-3 microg mL(-1) (6-10 microM) both...

10.1021/cb0500042 article EN ACS Chemical Biology 2006-02-01

DNA damage recognition by the nucleotide excision repair pathway requires an initial step identifying helical distortions in and a proofreading verifying presence of lesion. This is accomplished eukaryotes TFIIH complex. The critical component XPD protein, helicase that unwinds identifies damage. Here, we describe crystal structure archaeal protein with high sequence identity to human reveals how structural framework combined additional elements for strand separation scanning. Two RecA-like...

10.1371/journal.pbio.0060149 article EN cc-by PLoS Biology 2008-06-16

Mitochondrial DNA polymerase gamma (pol gamma) is responsible for replication and repair of mtDNA mutated in individuals with genetic disorders such as chronic external ophthalmoplegia Alpers syndrome. pol also an adventitious target toxic side effects several antiviral compounds, mutation its proofreading exonuclease leads to accelerated aging mouse models. We have used a variety physical functional approaches study the interaction human catalytic subunit both wild-type accessory factor,...

10.1074/jbc.m509730200 article EN cc-by Journal of Biological Chemistry 2005-11-02

Enhanced expression of the MYC transcription factor is observed in majority tumors. Two seemingly conflicting models have been proposed for its function: one proposes that enhances all genes, while other model suggests gene-specific regulation. Here, we explored hypothesis specific gene profiles arise since promoters differ affinity and high-affinity are fully occupied by physiological levels MYC. We determined cellular used RNA- ChIP-sequencing to correlate promoter occupancy with at...

10.7554/elife.15161 article EN cc-by eLife 2016-07-27

G-quadruplex (G4) DNA, an alternate structure formed by Hoogsteen hydrogen bonds between guanines in G-rich sequences, threatens genomic stability perturbing normal DNA transactions including replication, repair, and transcription. A variety of G4 topologies (intra- intermolecular) can form vitro, but the molecular architecture cellular factors influencing landscape vivo are not clear. Helicases that unwind structured molecules emerging as important class G4-resolving enzymes. The...

10.1074/jbc.m113.496463 article EN cc-by Journal of Biological Chemistry 2013-08-10

Somatic mutations in PRKACA gene, encoding the catalytic subunit of protein kinase A (PKA), have been recently found a high proportion sporadic adenomas associated with Cushing's syndrome. The aim was to analyze mutation large cohort patients adrenocortical masses. Samples from nine European centers were included (Germany, n = 4; Italy, France, 1). drawn 149 nonsecreting (n 32 + 2 peritumoral), subclinical hypercortisolism 36), syndrome 64 androgen-producing tumors 4), carcinomas 5 and...

10.1210/jc.2014-2152 article EN The Journal of Clinical Endocrinology & Metabolism 2014-07-24

The prototype of the γ-class carbonic anhydrase has been characterized from methanogenic archaeon Methanosarcina thermophila. Previously reported kinetic studies are consistent with this enzyme having a reaction mechanism similar to that mammalian α-class anhydrase. However, overall folds these two enzymes dissimilar, and apart zinc-coordinating histidines, active site residues bear little resemblance one another. crystal structures zinc-containing cobalt-substituted anhydrases M....

10.1021/bi000204s article EN Biochemistry 2000-07-08
Coming Soon ...