Muhammad Ramiz Uddin

ORCID: 0000-0002-2337-7383
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Antibiotic Resistance in Bacteria
  • COVID-19 and Mental Health
  • Poxvirus research and outbreaks
  • Antibiotics Pharmacokinetics and Efficacy
  • Drug Transport and Resistance Mechanisms
  • COVID-19 Pandemic Impacts
  • RNA Interference and Gene Delivery
  • Bacillus and Francisella bacterial research
  • Mangiferin and Mango Extracts
  • Natural Antidiabetic Agents Studies
  • Traditional and Medicinal Uses of Annonaceae
  • SARS-CoV-2 and COVID-19 Research
  • Enzyme-mediated dye degradation
  • Cavitation Phenomena in Pumps
  • Image Processing Techniques and Applications
  • Water Treatment and Disinfection
  • COVID-19 Prevention and Impact
  • Phenothiazines and Benzothiazines Synthesis and Activities
  • Hydrogen Storage and Materials
  • Oral and Maxillofacial Pathology
  • Bacterial biofilms and quorum sensing
  • Heat Transfer Mechanisms
  • Phytochemicals and Antioxidant Activities
  • bioluminescence and chemiluminescence research
  • Animal Virus Infections Studies

University of Oklahoma
2021-2025

Jahangirnagar University
2023-2024

Dhaka University of Engineering & Technology
2019

While the world is still attempting to recover from damage caused by broad spread of COVID-19, Monkeypox virus poses a new threat becoming global pandemic. Although itself not deadly and contagious as every day, patients case has been reported many nations. Therefore, it will be no surprise if ever faces another pandemic due lack proper precautious steps. Recently, Machine learning (ML) demonstrated huge potential in image-based diagnoses such cancer detection, tumor cell identification,...

10.48550/arxiv.2206.01862 preprint EN cc-by arXiv (Cornell University) 2022-01-01

Tripartite resistance nodulation and cell division multidrug efflux pumps span the periplasm are major drivers of among gram-negative bacteria. Cations, such as Mg2+, become concentrated within and, in contrast to cytoplasm, its pH is sensitive conditions outside cell. Here, we reveal an interplay between Mg2+ modulating structural dynamics periplasmic adapter protein, AcrA, function prototypical AcrAB-TolC pump from Escherichia coli. In absence AcrA becomes increasingly plastic acidic...

10.1016/j.str.2024.12.012 article EN cc-by Structure 2025-01-01

The research aims to analyze the catabolic strength of different hydrolytic enzymes in assessing biological conversion potential lignocellulose parts agricultural biomass wastes into functional edible sugars and biofuels.

10.5455/javar.2022.i565 article EN cc-by Journal of Advanced Veterinary and Animal Research 2022-01-01

This paper explains the initial Monkeypox Open image data collection procedure. It was created by assembling images collected from websites, newspapers, and online portals currently contains around 1905 after augmentation.

10.48550/arxiv.2206.01774 preprint EN public-domain arXiv (Cornell University) 2022-01-01

Abstract Membrane efflux pumps play a major role in bacterial multidrug resistance. The tripartite pump system from Escherichia coli , AcrAB-TolC, is target for inhibition to lessen resistance development and restore antibiotic efficacy, with homologs other ESKAPE pathogens. Here, we rationalize mechanism of against the periplasmic adaptor protein, AcrA, using combination hydrogen/deuterium exchange mass spectrometry, cellular assays, molecular dynamics simulations. We define structural AcrA...

10.1038/s41467-023-39615-x article EN cc-by Nature Communications 2023-07-18

Currently, liver diseases have become a serious global health issue, and this situation occurs due to the exposure of different agents, such as chemicals, alcohol, viruses, autoimmune diseases. Mangiferin is natural bioactive xanthone C-glycoside compound potent antioxidant that widely found in medicinal plants leaves Mangifera indica L. (Anacardiaceae). It possesses wide range biological properties, antidiabetic, hepatoprotective, anti-inflammatory, antioxidant, anticarcinogenic activities....

10.5455/jabet.2025.11 article EN cc-by Journal of Advanced Biotechnology and Experimental Therapeutics 2025-01-01

HIV continues to be a global public health issue. Urban slums in Bangladesh are at high risk for the epidemic, but little is known about how slum people perceive their and deal with alcohol use. Therefore, focus of study was explore perception, problematic use associated factors within urban settings. We conducted cross-sectional between March May 2023 among 739 residents Bangladesh. Data analysis involved bivariate multivariate linear regression analyses. The participants' mean age 29.7 (SD...

10.1080/09540121.2025.2473941 article EN PubMed 2025-03-05

Bacterial efflux pumps provide resistance to antibiotics and toxic substances within demanding ecological settings, such as low oxygen, extreme acid, during nutrient starvation. The MdtEF pump from Escherichia coli is upregulated in these conditions forms part of the proton motive force-driven resistance-nodulation-cell division (RND) superfamily. Here, we report cryo-electron microscopy structures native lipid-contained multidrug exporter MdtF, including a single-point mutant with an...

10.1101/2025.04.04.646765 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2025-04-04

Abstract Background Monkeypox virus (MPV), an endemic pathogen in Africa, shares clinical similarities with smallpox. Recent reports indicate a concerning increase the number of MPV cases detected outside its region, highlighting emergence multi-country outbreak. Given importance cell surface-binding protein E8L facilitating viral attachment to host cells, this study aimed identify potential small interfering RNAs (siRNAs) capable silencing and thereby serving as basis for therapeutic...

10.1186/s43088-024-00472-2 article EN cc-by Beni-Suef University Journal of Basic and Applied Sciences 2024-02-22

Antibiotic resistance poses an immediate and growing threat to human health. Multidrug efflux pumps are promising targets for overcoming antibiotic with small-molecule therapeutics. Previously, we identified a diaminoquinoline acrylamide, NSC-33353, as potent inhibitor of the AcrAB–TolC pump in Escherichia coli. This potentiates antibacterial activities novobiocin erythromycin upon binding membrane fusion protein AcrA. It is also substrate lacks appreciable intrinsic activity its own...

10.1021/acsinfecdis.1c00100 article EN ACS Infectious Diseases 2021-08-11

Tripartite resistance nodulation and cell division multidrug efflux pumps span the periplasm are a major driver of among Gram-negative bacteria. The provides distinct environment between inner outer membranes Cations, such as Mg

10.1101/2024.06.10.597921 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-06-10

Optimization of compound permeation into Gram-negative bacteria is one the most challenging tasks in development antibacterial agents. Two permeability barriers─the passive diffusion barrier outer membrane (OM) and active drug efflux─act synergistically to protect cells from action compounds. In Escherichia coli (E. coli) relatives, these two barriers sieve compounds based on different physicochemical properties that are defined by their interactions with OM porins efflux pumps,...

10.1021/acsinfecdis.2c00263 article EN ACS Infectious Diseases 2022-09-07

Abstract Background Human health is largely affected by self-medication in both ways, adversely and favorably, as evidenced the COVID-19 pandemic. The fear of spreading among workers hospital environments has led many Bangladeshi people to practice self-medicate for a preventive strategy against this disease. Consequently, entails an improper injudicious use medicine cure self-recognized symptoms. To date, no effective treatment. lack continual progression diseases educational settings...

10.1101/2022.05.14.22275075 preprint EN cc-by-nc-nd medRxiv (Cold Spring Harbor Laboratory) 2022-05-19

To study the antibacterial and phytochemical activities of bioactive elements in leaves Annona reticulata Linn, a historically used Bangladeshi medicinal plant.

10.1002/cbdv.202301495 article EN Chemistry & Biodiversity 2024-01-29

The human immunodeficiency virus (HIV) mainly attacks CD4+ T cells in the host. Chronic HIV infection gradually depletes cell pool, compromising host’s immunological reaction to invasive infections and ultimately leading acquired syndrome (AIDS). goal of this study is not provide a qualitative description rich dynamic characteristics model cells, but produce accurate analytical solutions using modified iterative approach. In research, new efficient method (NIM), coupling standard NIM Laplace...

10.3390/a15050175 article EN cc-by Algorithms 2022-05-23

This research aimed to isolate, identify, and characterize a new strain of Bacillus cereus through different molecular biology approaches so that it could be further studied for therapeutic purposes against selective enteric pathogens.Pure isolates B. were prepared from buffalo yogurt samples in REMBA medium. Initially, the morphological, physiological, biochemical properties accordingly. Following tests, identification was conducted plasmid DNA extraction, PCR, agarose gel electrophoresis,...

10.5455/javar.2022.i635 article EN cc-by Journal of Advanced Veterinary and Animal Research 2022-01-01

Myxofibrosarcoma belongs to the group of sarcoma tumours, which represent only 1% adult tumours worldwide. It is one rare, aggressive connective tissue neoplasm malignant fibrocytes in a myxoid matrix, and mostly occurs people their 60s 80s. Like many other tissue, it reveals high recurrence rates, but rarely metastasise. We present case 50-year-old female who had large, soft over left leg. Wide surgical excision was done due its increased size clinical behaviour, so as increase patient's...

10.5455/jpma.36429 article EN cc-by Journal of the Pakistan Medical Association 2020-01-01

Background: Human health is largely affected by self-medication in both ways, adversely and favorably, as evidenced the COVID-19 pandemic. The fear of spreading novel coronavirus disease (COVID-19) from workers hospital environments has led many Bangladeshi people to practice self-medicate for preventive strategy against this disease. Consequently, entails an improper injudicious use medicine cure self-recognized symptoms. To date, no effective treatment. lack a continual progression...

10.15419/ajhs.v8i1.507 article EN Asian Journal of Health Sciences 2022-06-30

Abstract Membrane efflux pumps play a major role in bacterial multidrug resistance. The tripartite pump system from Escherichia coli , AcrAB-TolC, is target for inhibition to lessen resistance development and restore antibiotic efficacy, with homologs other ESKAPE pathogens. Here, we rationalize mechanism of against the periplasmic adaptor protein, AcrA, using combination hydrogen/deuterium exchange mass spectrometry, cellular assays, molecular dynamics simulations. We define structural AcrA...

10.1101/2022.12.09.519754 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2022-12-09

Background: Due to a lack of treatments and vaccinations, the COVID-19 pandemic has resulted in number mental disorders, which have led psychiatric symptoms pleasure with one's life students. Researchers found that perceived SWL MWB dropped, may be because students are more likely experience health problems. The present study investigated prevalence determinants well-being satisfaction among university Bangladesh. Methods: An e-survey-based cross-sectional was carried out from February April...

10.15419/ajhs.v9i1.521 article EN Asian Journal of Health Sciences 2023-03-10

Abstract Background Luciferase is a well-known oxidative enzyme that produces bioluminescence. The Pseudomonas meliae plant pathogen causes wood rot on nectarine and peach possesses luciferase-like monooxygenase. After activation, it bioluminescence, the pathogen’s bioluminescence visual indicator of diseased plants. Methods present study aims to model characterize monooxygenase protein in P. for its similarity well-established luciferase. In this study, from infects chinaberry plants has...

10.1101/2023.03.27.534437 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-03-29

After the first infection in December 2019, mutating strains of SARS-CoV2 have already affected a lot healthy people around world. But situations not been as devastating before pandemic omicron SARS-CoV2. As June 2022, two more Omicron offshoots, BA.4 and BA.5, are now proliferating worldwide. Perhaps there variants dormant that require only minor changes to resurrect. So, this study was conducted with view halting afterwards. In study, we looked at spike protein see if any potential siRNAs...

10.2139/ssrn.4327362 article EN 2023-01-01
Coming Soon ...