A5046384151- Genetic Mapping and Diversity in Plants and Animals
- Genomics and Phylogenetic Studies
- Genetics and Plant Breeding
- Gene expression and cancer classification
- Genetic and phenotypic traits in livestock
- Wheat and Barley Genetics and Pathology
- Plant Molecular Biology Research
- Plant Stress Responses and Tolerance
- Plant-Microbe Interactions and Immunity
- Plant Disease Resistance and Genetics
- RNA and protein synthesis mechanisms
- Bioinformatics and Genomic Networks
- Machine Learning in Bioinformatics
- Rice Cultivation and Yield Improvement
- Cancer-related molecular mechanisms research
- Plant responses to water stress
- Plant Virus Research Studies
- Chromosomal and Genetic Variations
- Genetics, Bioinformatics, and Biomedical Research
- Plant Genetic and Mutation Studies
- Legume Nitrogen Fixing Symbiosis
- Agricultural pest management studies
- Nitrogen and Sulfur Effects on Brassica
- Soybean genetics and cultivation
- Plant Pathogenic Bacteria Studies
Indian Agricultural Statistics Research Institute
2016-2025
Indian Council of Agricultural Research
2016-2025
University of Cincinnati
2023
Indian Agricultural Research Institute
2022
Banaras Hindu University
2020
University of Louisville
2018
Odisha University of Agriculture and Technology
2017
Abstract The growing popularity of nano-fertilization around the world for enhancing yield and nutrient use efficiency has been realized, however its influence on soil microbial structure is not fully understood. purpose carrying out this study was to assess combined effect nano conventional fertilizers biological indicators crop in a wheat–maize system. results indicate that at par grain wheat maize obtained with application 75% recommended nitrogen (N) full dose phosphorus (P) potassium...
Yellow Mosaic Disease (YMD) in mungbean [ Vigna radiata (L.) R. Wilczek] is one of the most damaging diseases Asia. In northern part India, YMD caused by Mungbean India Virus (MYMIV), while southern this (MYMV). The molecular mechanism resistance remains largely unknown. study, RNA-seq analysis was conducted between a resistant (PMR-1) and susceptible (Pusa Vishal) genotype under infected control conditions to understand regulatory network operating mungbean-YMV. Overall, 76.8 million raw...
Lentil (Lens culinaris Medik.) is one of the major cool-season pulse crops worldwide. Its increasing demand as a staple has led to unlocking diverse germplasm collections conserved in genebanks develop its superior varieties. The Indian National Genebank, housed at Council Agricultural Research (ICAR)-National Bureau Plant Genetic Resources, New Delhi, India, currently 2,324 accessions comprising 1,796 indigenous and 528 exotic collections. This study was conducted unveil potential lentil by...
Wheat is a staple food worldwide and provides 40% of the calories in diet. Climate change global warming pose threat to wheat production, however, demand deeper understanding how heat stress might impact production biology. However, it difficult identify novel associated genes when genomic information not available. has very large complex genome that about 37 times size rice genome. The present study sequenced whole transcriptome cv. HD2329 at flowering stage, under control (22°±3°C) (42°C,...
RuBisCo activase (Rca) is a catalytic chaperone involved in modulating the activity of (key enzyme photosynthetic pathway). Here, we identified eight novel transcripts from wheat through data mining predicted to be Rca and cloned transcript 1.4 kb cv. HD2985, named as TaRca1 (GenBank acc. no. KC776912). Single copy number was observed genome. Expression analysis diverse genotypes (HD2985, Halna, PBW621, HD2329) showed very high relative expression Halna under control HS-treated, compared...
The ongoing COVID-19 pandemic, caused by SARS-CoV-2, has now spread across the nations with high mortality rates and multifaceted impact on human life. proper treatment methods to overcome this contagious disease are still limited. main protease enzyme (Mpro, also called 3CLpro) is essential for viral replication been considered as one of potent drug targets treating COVID-19. In study, virtual screening was performed find out molecular interactions between 36 natural compounds derived from...
To combat drought stress in rice, a major threat to global food security, three quantitative trait loci for 'yield under stress' (qDTYs) were successfully exploited the last decade. However, their molecular basis still remains unknown. understand role of secondary regulation by miRNA response and relation, if any, with qDTYs, dynamics was studied at booting stage two tolerant (Sahbaghi Dhan Vandana) one sensitive (IR 20) cultivars. In total, 53 known 40 novel differentially expressed (DE)...
Potato is a globally significant crop, crucial for food security and nutrition. Assessing vital nutritional traits pivotal enhancing value. However, traditional wet lab methods the screening of large germplasms are time- resource-intensive. To address this challenge, we used near-infrared reflectance spectroscopy (NIRS) rapid trait estimation in diverse potato germplasms. It employs molecular absorption principles that use sections electromagnetic spectrum precise determination biochemical...
Abiotic stress is one of the major factors responsible for huge yield loss in crop plants. MicroRNAs play a key role adaptive responses plants under abiotic conditions through post-transcriptional gene regulations. In present study, 95 potential miRNAs were predicted Brassica juncea using comparative genomics approach. It was noted that these miRNAs, target several transcription (TFs), transporter family proteins, signaling related genes, and protease encoding genes. Nineteen distinct...
Rice blast is a global threat to food security with up 50% yield losses. Panicle more severe form of rice and the response plant leaf panicle distinct in different genotypes. To understand specific blast, transcriptome analysis resistant cultivar Tetep, susceptible HP2216 was carried out using RNA-Seq approach after 48, 72 96 h infection Magnaporthe oryzae along mock inoculation. Transcriptome data infected tissues revealed that 3553 genes differentially expressed 2491 which must be...
Abstract Soil salinity is one of the major limiting factors for crop productivity across world. Halophytes have recently been a source attraction exploring survival and tolerance mechanisms at extreme saline conditions. Urochondra setulosa obligate grass halophyte that can survive in up to 1000 mM NaCl. The de novo transcriptome Urochondr leaves different salt concentrations 300–500 NaCl was generated on Illumina HiSeq. Approximately 352.78 million high quality reads with an average contig...
Quantitative trait loci (QTL) mapping is used for the precise localization of genomic regions regulating various traits in plants. Two major QTLs Soil Plant Analysis Development (SPAD) value ( qSPAD-7-1 ) and trichome density qTric-7-2 mungbean were identified using recombinant inbred line (RIL) populations (PMR-1×Pusa Baisakhi) on chromosome 7. Functional analysis QTL region 35 candidate genes SPAD (16 No) (19 traits. The dorsal leaf surface include VRADI07G24840, VRADI07G17780 ,...
Abstract The mutant matrilineal ( mtl ) gene encoding patatin-like phospholipase activity is involved in in-vivo maternal haploid induction maize. Doubling of chromosomes haploids by colchicine treatment leads to complete fixation inbreds just one generation compared 6–7 generations selfing. Thus, knowledge proteins other crops assumes great significance for induction. So far, no online tool available that can classify unknown into proteins. Here, we aimed optimize a machine learning-based...
Rice blast disease, instigated by Magnaporthe oryzae (M. oryzae), significantly impedes global rice production. Targeting the M. signaling protein, cAMP-Protein Kinase A (CPKA), which facilitates appressorium development and host penetration, this study explores potential inhibitory effects of natural compounds. Virtual screening, molecular docking text mining approaches were used to find nimonol curcumin that inhibit CPKA protein. The MM-PBSA method was do dynamics (MD) simulation binding...
Background: The identification and classification of natural products are vital in drug discovery bioactive compound exploration. Traditional methods laborious timeconsuming, necessitating innovative tools for accurate predictions using advanced AI techniques. Objectives: This paper presents NaturePred, a user-friendly tool designed to predict the class calculate eight physicochemical properties protein sequences. It aims accurately five distinct classes product biosynthetic gene clusters...
<title>Abstract</title> The WRKY gene family plays a very important role in plant growth, development, and response to both biotic abiotic stresses. Despite its importance, is yet be explored lentil (<italic>Lentil culinaris</italic> Medikus), an legume cultivated worldwide. This study presents the first in-depth analysis of genes with respect their genomic organization, evolution, expression patterns. A total 105 <italic>LcWRKY</italic> were identified, distributed across seven chromosomes,...
Biofilms can be defined as an organized group of micro-organisms living within a self-produced matrix polymeric substances that get attached to several surfaces. It becomes apparent these microbial collectives are present in practically all environments. Planktonic bacteria exhibit 10-1,000-fold increase antibiotic resistance compared their biofilm-dwelling counterparts. These bacteria' interactions with surfaces have significant effects on number different domains, including the creation...
Heat stress is a critical factor affecting global wheat production and productivity. In this study, out of 500 studied germplasm lines, diverse panel 126 genotypes grown under twelve distinct environmental conditions was analyzed. Using 35 K single-nucleotide polymorphism (SNP) genotyping assays trait data on five biochemical parameters, including grain protein content (GPC), amylose (GAC), total soluble sugars (TSS), iron (Fe), zinc (Zn) content, six multi-locus GWAS (ML-GWAS) models were...
Wheat (Triticum aestivum L.), a globally significant cereal crop and staple food, faces major production challenges due to abiotic stresses such as heat stress (HS), which pose threat global food security. To address this, diverse panel of 126 wheat genotypes, primarily landraces, was evaluated across twelve environments in India, comprising three locations, two years growing conditions. The study aimed identify genetic markers associated with key agronomic traits bread wheat, including...