Levin Joe Klages

ORCID: 0000-0003-1634-3705
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About
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Research Areas
  • Genomics and Phylogenetic Studies
  • Bacteriophages and microbial interactions
  • Identification and Quantification in Food
  • Protist diversity and phylogeny
  • Photosynthetic Processes and Mechanisms
  • Fungal Infections and Studies
  • Algal biology and biofuel production
  • Lymphoma Diagnosis and Treatment
  • Microbial Community Ecology and Physiology
  • Microbial Metabolism and Applications
  • Plant Disease Resistance and Genetics
  • Cutaneous lymphoproliferative disorders research
  • SARS-CoV-2 and COVID-19 Research
  • SARS-CoV-2 detection and testing
  • Photoreceptor and optogenetics research

Bielefeld University
2021-2024

Novel, white-pigmented, Gram-negative bacterial strains (K-M0706

10.1016/j.syapm.2024.126527 article EN cc-by Systematic and Applied Microbiology 2024-06-29

Analysis of T-cell receptor (TCR) clonality is a major diagnostic tool for lymphomas, particularly cutaneous lymphomas (CTCL) like Mycosis fungoides and Sézary syndrome. However, fast cost-effective workflow needed to enable widespread use this method.

10.3390/cancers16213700 article EN Cancers 2024-11-01

Genomic surveillance of the SARS-CoV-2 pandemic is crucial and mainly achieved by amplicon sequencing protocols. Overlapping tiled-amplicons are generated to establish contiguous genome sequences, which enable precise resolution infection chains outbreaks. We investigated a outbreak in local hospital used nanopore with modified ARTIC protocol employing 1200 bp long amplicons. detected deletion 168 nucleotides ORF8 gene 76 samples from outbreak. This difficult identify classical procedures...

10.3390/v13091870 article EN cc-by Viruses 2021-09-18

ABSTRACT We cultivated bacteria contained in a sandy soil sample, isolated DNA from single bacterial colony, and assembled genomic reads the full genome sequence of Chitinophaga Microbacterium strains, termed MM2321 MM2322. Besides sequences, phylogenetic classifications both strains are reported.

10.1128/mra.00700-24 article EN Microbiology Resource Announcements 2024-09-26

ABSTRACT Photosynthetic organisms often interact with heterotrophic microbes. We here report the complete genome sequences of bacterial strains Asticcacaulis sp. MM231 and Brevundimonas subvibrioides MM232. Both bacteria were co-isolated from a single green colony originating an aquatic sample taken pond at Bielefeld University campus.

10.1128/mra.00699-24 article EN Microbiology Resource Announcements 2024-09-27

Abstract Light as a substrate for photosynthesis may be boon or bane. To thrive, photosynthetic organisms must constantly respond to changing light and CO2 conditions by balancing energy harvest consumption in highly dynamic way. Two major safeguard measures of photoacclimation, that is photoprotection carbon concentrating mechanism, underlie tight transcriptional control, leading expression changes under high limited with different dynamics both systems. Here, using consensus gene...

10.1101/2023.10.30.564712 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-10-31
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