Abhishek Dasgupta

ORCID: 0000-0003-4420-0656
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About
Contact & Profiles
Research Areas
  • SARS-CoV-2 and COVID-19 Research
  • COVID-19 epidemiological studies
  • COVID-19 Clinical Research Studies
  • Data-Driven Disease Surveillance
  • SARS-CoV-2 detection and testing
  • Bayesian Modeling and Causal Inference
  • Musculoskeletal pain and rehabilitation
  • Logic, Reasoning, and Knowledge
  • Muscle activation and electromyography studies
  • Stroke Rehabilitation and Recovery
  • Estrogen and related hormone effects
  • Bacillus and Francisella bacterial research
  • Influenza Virus Research Studies
  • Shoulder Injury and Treatment
  • Judicial and Constitutional Studies
  • Evolutionary Game Theory and Cooperation
  • Caveolin-1 and cellular processes
  • Constraint Satisfaction and Optimization
  • Travel-related health issues
  • Advanced Algebra and Logic
  • Legal Language and Interpretation
  • Poxvirus research and outbreaks
  • Climate Change, Adaptation, Migration
  • Graph Theory and Algorithms
  • Artificial Intelligence in Law

University of Oxford
2020-2025

Google (United States)
2024

Indian Institute of Science Education and Research Kolkata
2010

Indian Institute of Science Bangalore
2009

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) now arise in the context heterogeneous human connectivity and population immunity. Through a large-scale phylodynamic analysis 115,622 Omicron BA.1 genomes, we identified >6,000 introductions antigenically distinct VOC into England analyzed their local transmission dispersal history. We find that six eight largest English lineages were already transmitting when was first reported southern Africa (22...

10.1126/science.adg6605 article EN cc-by Science 2023-07-20

Purpose: Oral language skills provide a critical foundation for formal education and especially the development of children's literacy (reading spelling) skills. It is therefore important teachers to be able assess skills, if they are concerned about their learning. We report standardization mobile app—LanguageScreen—that can used by professionals ability. Method: The sample included data from approximately 350,000 children aged 3;06 (years;months) 8;11 who were screened receptive expressive...

10.1044/2024_lshss-24-00004 article EN cc-by Language Speech and Hearing Services in Schools 2024-05-22

Health consequences arising from climate change are threatening to offset advances made reduce the damage of infectious diseases, which vary by region and resilience local health system. Here we discuss how change-related migrations disease burden linked through various processes, such as expansion pathogens into non-endemic areas, overcrowding in new informal settlements, increased proximity vectors susceptible human populations. Countries that predicted have highest those least...

10.1038/s41558-024-02078-z article EN other-oa Nature Climate Change 2024-07-30

10.1007/s10032-010-0121-9 article EN International Journal on Document Analysis and Recognition (IJDAR) 2010-05-31

We propose a novel machine learning (ML)-driven methodology to estimate biomechanical variables of interest traditionally obtained from upper-extremity musculoskeletal (MSK) modeling. MSK models facilitate personalized modeling, perform "what-if" analyses, and potentially enhance clinical decision-making. In certain settings, are driven by inertial motion capture (IMC) data. IMC systems portable, user-friendly, relatively affordable as well provide additional information. However, can be...

10.1109/jsen.2022.3197461 article EN IEEE Sensors Journal 2022-08-15

Whilst timely clinical characterisation of infections caused by novel SARS-CoV-2 variants is necessary for evidence-based policy response, individual-level data on infecting are typically only available a minority patients and settings. Here, we propose an innovative approach to study changes in COVID-19 hospital presentation outcomes after the Omicron variant emergence using publicly population-level relative frequency infer likely responsible cases. We apply this method collected large...

10.7554/elife.80556 article EN cc-by eLife 2022-10-05

Summary SARS-CoV-2 variants of concern (VOCs) arise against the backdrop increasingly heterogeneous human connectivity and population immunity. Through a large-scale phylodynamic analysis 115,622 Omicron genomes, we identified >6,000 independent introductions antigenically distinct virus into England reconstructed dispersal history resulting local transmission. Travel restrictions on southern Africa did not reduce BA.1 importation intensity as secondary hubs became major exporters. We...

10.1101/2023.01.02.23284109 preprint EN cc-by-nc-nd medRxiv (Cold Spring Harbor Laboratory) 2023-01-04

Marker-based Optical Motion Capture (OMC) systems and associated musculoskeletal (MSK) modelling predictions offer non-invasively obtainable insights into muscle joint loading at an in vivo level, aiding clinical decision-making. However, OMC system is lab-based, expensive, requires a line of sight. Inertial (IMC) techniques are widely-used alternatives, which portable, user-friendly, relatively low-cost, although with lesser accuracy. Irrespective the choice motion capture technique, one...

10.3390/bioengineering10050510 article EN cc-by Bioengineering 2023-04-24
Bronner P. Gonçalves Waasila Jassat Joaquín Baruch Madiha Hashmi Amanda Rojek and 95 more Abhishek Dasgupta Ignacio Martín‐Loeches Luis Felipe Reyes Chiara Piubelli Barbara Wanjiru Citarella Christiana Kartsonaki Benjamin Lefèvre José W. López Miles Lunn Ewen M. Harrison Moritz U. G. Kraemer Sally Shrapnel Peter Horby Zeno Bisoffi Piero Olliaro Laura Merson Sheryl Ann Abdukahil Kamal Abu Jabal Nashat Abu Salah Eka Airlangga Ali Ait Hssain Chika Akwani Eman Al Qasim Angela Alberti Osama Aldabbourosama Marta Alessi Beatrice Alex Abdulrahman Al‐Fares Jeffrey Aliudin Mohammed Alkahlout Lana Almasri Yousef Al-Saba’a Rita Vieira Alves Joana Alves Cabrita Maria João Amaral Phoebe Ampaw Aditya John Anchan Andrea Angheben Yaseen M. Arabi Antonio Arcadipane Patrick Archambault Lukas Arenz Rakesh C. Arora Elizabeth A. Ashley Anika Atique Moad Atlowly Benjamin Bach J. Kenneth Baillie J. Kevin Baird Valeria Balan Renata Barbalho Nicholas Yuri Barbosa William Barclay Michaela Barnikel Netta Beer Husna Begum David Bellemare Anna Beltrame Giulia Bertoli Cláudia Bianco Felwa Bin Humaid Jonathan Bitton Catherine Blier Debby Bogaert Diogo Borges Dounia Bouhmani Thipsavanh Bounphiengsy Latsaniphone Bountthasavong Bianca M. Boxma‐de Klerk Filipa Brás Monteiro Luca Brazzi Nina Buchtele Danilo Buonsenso Aidan Burrell Ingrid G. Bustos Joana Melo Cabrita Eder Cáceres Rui Caetano Garcês Josie Campisi Cecilia Canepa Janice Caoili Chiara Simona Cardellino Filipa Cardoso Filipe S. Cardoso Sofia Cardoso Gayle Carney François Martin Carrier Gail Carson Mariana Cascão José Casimiro Silvia Castañeda Nidyanara Castanheira Paolo Cattaneo Roberta Figueiredo Cavalin Alexandros Cavayas

BackgroundIndividuals vaccinated against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), when infected, can still develop disease that requires hospitalization. It remains unclear whether these patients differ from hospitalized unvaccinated with regard to presentation, coexisting comorbidities, and outcomes.MethodsHere, we use data an international consortium study this question assess differences between groups are context specific. Data 83,163 COVID-19 (34,843 vaccinated,...

10.1016/j.medj.2023.08.005 article EN cc-by Med 2023-09-21

SARS-CoV-2 case data are primary sources for estimating epidemiological parameters and modelling the dynamics of outbreaks. Understanding biases within case-based used in analyses is important as they can detract from value these rich datasets. This raises questions how variations surveillance affect estimation such growth rates. We use standardised line list COVID-19 Argentina, Brazil, Mexico Colombia to estimate delay distributions symptom-onset-to-confirmation, -hospitalisation -death...

10.1016/j.epidem.2022.100627 article EN cc-by Epidemics 2022-09-05

We study the distribution of maximum a set random fitnesses with fixed number mutations in model biological evolution. The fitness variables are not independent and correlations can be varied via parameter . present analytical calculations for following three solvable cases: (i) one-step mutants arbitrary , (ii) weakly correlated (iii) strongly In all these cases, we find that limit is standard Gumbel form.

10.1088/1742-5468/2009/10/l10001 article EN Journal of Statistical Mechanics Theory and Experiment 2009-10-07

Identifying important policy outputs has long been of interest to political scientists. In this work, we propose a novel approach the classification policies. Instead obtaining and aggregating expert evaluations significance for finite set outputs, use experts identify small significant then employ positive unlabeled (PU) learning search other similar examples in large set. We further automate first step by harvesting “seed” sets from web data. offer an application new classifying over 9,000...

10.1017/s000305542000091x article EN American Political Science Review 2020-10-19

Abstract We present Global.health, a scalable online platform for collecting high-dimensional epidemiological data and transforming those into consistent schema to enable distributed analyses. Global.health was originally developed handle the demands of high-volume, accurate collection line list in early months COVID-19 pandemic. It has since proven amenable rapid adjustment as new variables became relevant, example tracking variants concern vaccination status cases, well clinical data. The...

10.21203/rs.3.rs-1528783/v1 preprint EN cc-by Research Square (Research Square) 2022-07-19

Anytime inference is performed incrementally, with the accuracy of being controlled by a tunable parameter, usually time. Such anytime algorithms are also interruptible, gradually converging to exact value until terminated. While for specific domains like probability potentials exist in literature, our objective this article obtain an algorithm which sufficiently generic cover wide range domains. For we utilise theory as basis constructing algorithm, and particular, extending work done on...

10.48550/arxiv.1605.04218 preprint EN other-oa arXiv (Cornell University) 2016-01-01

<div>Abstract<p>Breast cancer stem-like cells (BCSC) are implicated in recurrence and metastasis of triple-negative breast (TNBC). We have recently discovered that ganglioside GD2 expression defines BCSCs ST8SIA1 regulates BCSC function. In this report, we show is highly expressed primary TNBC; its positively correlated with the several BCSC-associated genes such as BCL11A, FOXC1, CXCR4, PDGFRβ, SOX2, mutations p53. CRISPR knockout completely inhibited functions, including...

10.1158/1535-7163.c.6538068.v1 preprint EN 2023-04-03

<div>Abstract<p>Breast cancer stem-like cells (BCSC) are implicated in recurrence and metastasis of triple-negative breast (TNBC). We have recently discovered that ganglioside GD2 expression defines BCSCs ST8SIA1 regulates BCSC function. In this report, we show is highly expressed primary TNBC; its positively correlated with the several BCSC-associated genes such as BCL11A, FOXC1, CXCR4, PDGFRβ, SOX2, mutations p53. CRISPR knockout completely inhibited functions, including...

10.1158/1535-7163.c.6538068 preprint EN 2023-04-03

Oral language skills provide a critical foundation for formal education and especially the development of children’s literacy (reading spelling) skills. It is therefore important teachers to be able assess skills, if they are concerned about their learning. We report standardization mobile App, LanguageScreen (OxEd Assessment, 2022), that can used by professionals ability.

10.31234/osf.io/aeqzn preprint EN 2023-12-12
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