Kerry K. Cooper

ORCID: 0000-0003-4541-1324
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About
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Research Areas
  • Salmonella and Campylobacter epidemiology
  • Viral gastroenteritis research and epidemiology
  • Bacteriophages and microbial interactions
  • Clostridium difficile and Clostridium perfringens research
  • Veterinary medicine and infectious diseases
  • Vibrio bacteria research studies
  • Genomics and Phylogenetic Studies
  • Listeria monocytogenes in Food Safety
  • Escherichia coli research studies
  • Viral Infections and Vectors
  • Mosquito-borne diseases and control
  • Antimicrobial Resistance in Staphylococcus
  • Digestive system and related health
  • Photosynthetic Processes and Mechanisms
  • Postharvest Quality and Shelf Life Management
  • Zoonotic diseases and public health
  • Probiotics and Fermented Foods
  • Streptococcal Infections and Treatments
  • Animal Nutrition and Physiology
  • Infant Nutrition and Health
  • Pharmacological Effects and Assays
  • Child Nutrition and Water Access
  • Aquaculture disease management and microbiota
  • Microbial Community Ecology and Physiology
  • Insect and Pesticide Research

University of Arizona
2013-2025

University of California Division of Agriculture and Natural Resources
2024

Arizona Western College
2023-2024

Texas A&M University
2023-2024

AstraZeneca (United States)
2022

California State University, Northridge
2015-2021

United States Department of Agriculture
2014

Western Regional Research Center
2014

Agricultural Research Service
2014

University of California, Davis
2013

Antimicrobial resistant (AMR) Campylobacter is a global health threat, however there limited information on genomic determinants of resistance in low- and middle-income countries. We evaluated AMR using collection whole genome sequenced jejuni C. coli isolates from Iquitos, Peru. two pediatric cohort studies enriched with that demonstrated to ciprofloxacin azithromycin were mined for determinants. The gyrA mutation leading the Thr86Ile amino acid change was only associated fluoroquinolone...

10.1016/j.jgar.2024.01.009 article EN cc-by-nc-nd Journal of Global Antimicrobial Resistance 2024-01-24

Abstract Background Although serotype O157:H7 is the predominant enterohemorrhagic Escherichia coli (EHEC), outbreaks of non-O157 EHEC that cause severe foodborne illness, including hemolytic uremic syndrome have increased worldwide. In fact, serotypes are now estimated to over half all Shiga toxin-producing (STEC) cases, and infections frequently associated with O26, O45, O103, O111, O121, O145. Currently, there no complete genomes for O145 in public databases. Results We determined genome...

10.1186/1471-2164-15-17 article EN cc-by BMC Genomics 2014-01-10

Akkermansia muciniphila is a mucin-degrading bacterium found in the human gut and often associated with positive health. However, despite being detected by as early 1 month of age, little known about role infant gut. Human milk oligosaccharides (HMOs) are abundant components structurally similar to that comprise mucin, preferred growth substrate human-associated Akkermansia. A limited subset intestinal bacteria has been shown grow well on HMOs mucin. We therefore examined ability genomically...

10.1128/aem.01487-21 article EN cc-by Applied and Environmental Microbiology 2021-10-20

Abstract In this study, we aimed to examine the association between gastrointestinal (GI) symptom presence during severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and prevalence of GI symptoms development post-infectious irritable bowel (PI-IBS). We used data from a prospective cohort logistic regression status confirmed SARS-CoV-2 persistent at ≥45 days. also report incidence PI-IBS following infection. Of 1475 participants in 33.8% ( n = 499) had Cases with an odds...

10.1017/s0950268822001200 article EN cc-by-nc-nd Epidemiology and Infection 2022-01-01

ABSTRACT In this work, we investigated the Campylobacter jejuni dps (DNA binding protein from starved cells) gene for a role in biofilm formation and cecal colonization poultry. vitro assays were conducted with stationary-phase cells cell culture plates under microaerophilic conditions. These studies demonstrated significant (>50%) reduction by C. mutant compared to that wild-type strain. Studies poultry also importance of host . Real-time PCR analysis mRNA extracted contents infected...

10.1128/cvi.00151-12 article EN Clinical and Vaccine Immunology 2012-07-12

Campylobacter is the primary cause of bacterial diarrhea in United States and can lead to development postinfectious autoimmune neuropathy known as Guillain-Barré syndrome. Also, drug-resistant campylobacters are becoming a serious concern both locally abroad. In low- middle-income countries (LMICs), infection with linked high rates morbidity, growth stunting, mortality children, breastfeeding important for infant nutrition, development, protection against infectious diseases. this study, we...

10.1128/msphere.00735-19 article EN cc-by mSphere 2020-01-14

Introduction Postacute sequelae of SARS-CoV-2 infection (PASC) are extensive. Also known as long COVID, primary outcomes reported neurologic, cardiac and respiratory in nature. However, several studies have also an increase gastrointestinal (GI) symptoms syndromes following COVID-19. This study PASC will include extensive analyses GI symptoms, determine if people with pre-existing irritable bowel syndrome (IBS) at higher risk developing generally or PASC-GI, which biomarkers impacted to what...

10.1136/bmjopen-2024-095093 article EN cc-by-nc-nd BMJ Open 2025-01-01

Abstract The genetic structure of bacterial populations can be related to geographical locations isolation. In some species, there is a strong correlation between distance and distance, which caused by different evolutionary mechanisms. Patterns ancient admixture in Helicobacter pylori reconstructed concordance with past human migration, whereas Mycobacterium tuberculosis it the lack recombination that causes allopatric clusters. Campylobacter , analyses genomic data molecular typing have...

10.1111/mec.14176 article EN cc-by Molecular Ecology 2017-05-10

Acute hepatopancreatic necrosis disease (AHPND) is a devastating condition impacting marine shrimp production worldwide. The objective of this study was to evaluate the effects four probiotic formulations on Pacific white (Litopenaeus vannamei) infected with pathogenic Vibrio parahaemolyticus causing AHPND. In addition, bacterial community composition analyses gastrointestinal tract (GIT) and aquaculture water before after infection were conducted by sequencing variable region 4 16S rRNA...

10.1111/are.13791 article EN cc-by-nc-nd Aquaculture Research 2018-08-24

Campylobacter is the leading bacterial cause of gastroenteritis worldwide and its incidence especially high in low- middle-income countries (LMIC). Disease epidemiology LMICs different compared to income like USA or Europe. Children commonly have repeated chronic infections even absence symptoms, which can lead deficits early childhood development. In this study, we sequenced characterized C. jejuni (n = 62) from a longitudinal cohort study children under age 5 with without diarrheal...

10.1371/journal.pntd.0008533 article EN public-domain PLoS neglected tropical diseases 2020-08-10

• Drug-induced nephrotoxicity is an increasingly recognized complication of a wide variety therapeutic agents. The three the most commonly used drug groups are reviewed in this article. They include antibiotics, radiocontrast agents, and nonsteroidal anti-inflammatory drugs. Since clinical spectrum drug-induced broad, it imperative that clinician recognize these nephrotoxic syndromes while they reversible with discontinuation offending drug. (<i>Arch Intern Med</i>1987;147:1213-1218)

10.1001/archinte.1987.00370070027003 article EN Archives of Internal Medicine 1987-07-01

Campylobacter jejuni is one of the leading causes bacterial gastroenteritis in world; however, there only complete genome sequence a poultry strain to date. Here we report and annotation second strain, C. S3. This has been shown be nonmotile, poor invader vitro, colonizer after minimal vitro passage.

10.1128/jb.01475-10 article EN Journal of Bacteriology 2011-01-08

Iron acquisition is an absolute requirement by most microorganisms for host survival. In this work, we investigated the Campylobacter jejuni iron binding Dps protein a potential role in virulence. vitro assays using J774A.1 macrophage-like cells demonstrated 2.5 log reduction C. survival of mutant and four logs invasion HEp-2 epithelial compared to wild-type strain. To examine dps gene pathogenesis, piglet model was used challenge studies. vivo inoculation studies newborn piglets with...

10.1089/fpd.2011.0892 article EN Foodborne Pathogens and Disease 2011-08-21
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