Amidou Samie

ORCID: 0000-0002-7410-5695
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Research Areas
  • Child Nutrition and Water Access
  • Parasitic Infections and Diagnostics
  • Amoebic Infections and Treatments
  • Viral gastroenteritis research and epidemiology
  • Diagnosis and treatment of tuberculosis
  • Fecal contamination and water quality
  • Essential Oils and Antimicrobial Activity
  • Parasites and Host Interactions
  • Nanoparticles: synthesis and applications
  • Escherichia coli research studies
  • Global Maternal and Child Health
  • Wastewater Treatment and Reuse
  • Moringa oleifera research and applications
  • Child Nutrition and Feeding Issues
  • Fluoride Effects and Removal
  • Food Security and Health in Diverse Populations
  • Tuberculosis Research and Epidemiology
  • Helicobacter pylori-related gastroenterology studies
  • Ethnobotanical and Medicinal Plants Studies
  • Phytochemistry and Biological Activities
  • Healthcare and Environmental Waste Management
  • Phytochemistry and Bioactive Compounds
  • Pediatric health and respiratory diseases
  • Hepatitis Viruses Studies and Epidemiology
  • Poverty, Education, and Child Welfare

University of Venda
2016-2025

University of Limpopo
2006-2024

University of Agriculture Faisalabad
2024

Czech Academy of Sciences, Institute of Microbiology
2017

Johns Hopkins University
2017

University of Virginia
2006-2008

University of South Africa
2007-2008

Center for Global Health
2006-2007

University of the Philippines Manila
2007

Africa Center
2007

BackgroundMost studies of the causes diarrhoea in low-income and middle-income countries have looked at severe disease people presenting for care, there are few estimates pathogen-specific burdens community.MethodsWe undertook a birth cohort study with not only intensive community surveillance but also routine collection non-diarrhoeal stools from eight sites South America, Africa, Asia. We enrolled children within 17 days birth, diarrhoeal episodes (defined as maternal report three or more...

10.1016/s2214-109x(15)00151-5 article EN cc-by-nc-nd The Lancet Global Health 2015-07-19
Angel Mendez Acosta César Banda Chávez J. T. Flores Maribel Paredes Olotegui Sylvia Rengifo Pinedo and 95 more D. R. Trigoso A. O. Vasquez Imran Ahmed Dewan S Alam Asad Ali Zulfiqar A Bhutta S. Qureshi Sadia Shakoor Sajid Soofi Ali Turab Aisha K. Yousafzai Alizeh Zaidi Ladaporn Bodhidatta Carl J. Mason Sudhir Babji Anuradha Bose Sushil John Gagandeep Kang Biji T. Kurien Jayaprakash Muliyil Venkata Raghava Mohan Anup Ramachandran Amy Rose W. Pan Ramya Ambikapathi D. Carreon Vivek Charu Dabo Liu Vivian Doan Jhanelle Graham Christel Hoest Stacey Knobler D R Lang Benjamin McCormick Monica McGrath MA William L Miller Archana Mohale G. Nayyar Stephanie Psaki Zeba Rasmussen Stephanie A Richard Jessica C. Seidman V. Wang Rachel Blank Michael Gottlieb Karen H. Tountas Caroline Amour Estomih Mduma Tahmeed Ahmed A.M. Shamsir Ahmed M. Dinesh Fahmida Tofail Rashidul Haque Iqbal Hossain Mamunul Islam Mustafa Mahfuz Ram K. Chandyo Prakash Shrestha Rita Shrestha Manjeswori Ulak Robert E. Black Laura E. Caulfield William Checkley P. Chen Margaret Kosek G. Lee Pablo Peñataro Yori Laura E. Murray‐Kolb Barbara A. Schaefer Laura Pendergast Celina Monteiro Abreu Alexandre Havt Hilda Costa Alessandra Di Moura José Quirino Filho Álvaro M. Leite Aldo Â. M. Lima Noélia L. Lima Inês Lima Bruna Leal Lima Maciel Maria Elisabete Amaral de Moraes Francisco Suetônio Bastos Mota Reinaldo B. Oriá Josiane da Silva Quetz Alberto M. Soares Erling Svensen S. Tor Crystal L. Patil Pascal Bessong Cloupas Mahopo A. Mapula C. Nesamvuni E. Nyathi Amidou Samie Leah J. Barrett

Highly prevalent conditions with multiple and complex underlying etiologies are a challenge to public health. Undernutrition, for example, affects 20% of children in the developing world. The cause consequence poor nutrition multifaceted. Undernutrition has been associated half all deaths worldwide aged <5 years; addition, its pernicious long-term effects early childhood have cognitive physical growth deficits across generations thought suppress immunity further infections reduce efficacy...

10.1093/cid/ciu653 article EN public-domain Clinical Infectious Diseases 2014-10-10
James A Platts-Mills Jie Liu Elizabeth T. Rogawski McQuade Furqan Kabir Paphavee Lertsethtakarn and 95 more Mery Siguas Shaila Khan Ira Praharaj Arinao Murei Rosemary Nshama Buliga Mujaga Alexandre Havt Irene A Maciel Timothy L. McMurry Darwin J. Operario Mami Taniuchi Jean Gratz Suzanne Stroup James H. Roberts Adil Kalam Fátima Aziz Shahida Qureshi Mamunul Islam Pimmada Sakpaisal Sasikorn Silapong Pablo Peñataro Yori Revathi Rajendiran Blossom Benny Monica McGrath Benjamin McCormick Jessica C. Seidman Dennis Lang Michael Gottlieb Richard L. Guerrant Aldo Â. M. Lima José Paulo Gagliardi Leite Amidou Samie Pascal Bessong Nicola Page Ladaporn Bodhidatta Carl J. Mason Sanjaya K. Shrestha Ireen Kiwelu Estomih Mduma Najeeha Talat Iqbal Zulfiqar A Bhutta Tahmeed Ahmed Rashidul Haque Gagandeep Kang Margaret Kosek Eric R. Houpt Angel Mendez Acosta Rosa Burga César Banda Chávez Julian Torres Flores Maribel Paredes Olotegui Silvia Rengifo Pinedo Dixner Rengifo Trigoso Angel Orbe Vasquez Imran Ahmed Didar Alam Asad Ali Muneera A. Rasheed Sajid Soofi Ali Turab Aisha K. Yousafzai Anita K. M. Zaidi Binob Shrestha Bishnu Bahadur Rayamajhi Tor A. Strand Geetha Ammu Sudhir Babji Anuradha Bose Ajila George Dinesh Hariraju Mats Steffi Jennifer Sushil John Shiny Kaki Priyadarshani Karunakaran Beena Koshy Robin P. Lazarus Jayaprakash Muliyil Preethi Ragasudha Venkata Raghava Mohan Sophy Raju Anup Ramachandran Rakhi Ramadas Karthikeyan Ramanujam Anuradha Rose Reeba Roshan Srujan Lam Sharma Shanmuga Sundaram Rahul J. Thomas William K. Pan Ramya Ambikapathi J. Daniel Carreon Viyada Doan Christel Hoest Stacey Knobler Mark A. Miller

Optimum management of childhood diarrhoea in low-resource settings has been hampered by insufficient data on aetiology, burden, and associated clinical characteristics. We used quantitative diagnostic methods to reassess refine estimates aetiology from the Etiology, Risk Factors, Interactions Enteric Infections Malnutrition Consequences for Child Health Development (MAL-ED) cohort study.We re-analysed stool specimens multisite MAL-ED study children aged 0-2 years done at eight locations...

10.1016/s2214-109x(18)30349-8 article EN cc-by The Lancet Global Health 2018-10-01
Elizabeth T. Rogawski McQuade Jie Liu James A Platts-Mills Furqan Kabir Paphavee Lertsethtakarn and 95 more Mery Siguas Shaila Khan Ira Praharaj Arinao Murei Rosemary Nshama Buliga Mujaga Alexandre Havt Irene A Maciel Darwin J. Operario Mami Taniuchi Jean Gratz Suzanne Stroup James H. Roberts Adil Kalam Fátima Aziz Shahida Qureshi Mamunul Islam Pimmada Sakpaisal Sasikorn Silapong Pablo Peñataro Yori Revathi Rajendiran Blossom Benny Monica McGrath Jessica C. Seidman Dennis Lang Michael Gottlieb Richard L. Guerrant Aldo Â. M. Lima José Paulo Gagliardi Leite Amidou Samie Pascal Bessong Nicola Page Ladaporn Bodhidatta Carl J. Mason Sanjaya K. Shrestha Ireen Kiwelu Estomih Mduma Najeeha Talat Iqbal Zulfiqar A Bhutta Tahmeed Ahmed Rashidul Haque Gagandeep Kang Margaret Kosek Eric R. Houpt Angel Mendez Acosta Rosa Burga César Banda Chávez Julian Torres Flores Maribel Paredes Olotegui Silvia Rengifo Pinedo Dixner Rengifo Trigoso Angel Orbe Vasquez Imran Ahmed Didar Alam Asad Ali Muneera A. Rasheed Sajid Soofi Ali Turab Aisha K. Yousafzai Anita K. M. Zaidi Binob Shrestha Bishnu Bahadur Rayamajhi Tor A. Strand Geetha Ammu Sudhir Babji Anuradha Bose Ajila George Dinesh Hariraju Mats Steffi Jennifer Sushil John Shiny Kaki Priyadarshani Karunakaran Beena Koshy Robin P. Lazarus Jayaprakash Muliyil Preethi Ragasudha Venkata Raghava Mohan Sophy Raju Anup Ramachandran Rakhi Ramadas Karthikeyan Ramanujam Anuradha Rose Reeba Roshan Srujan Lam Sharma Shanmuga Sundaram Rahul J. Thomas William Pan Ramya Ambikapathi J. Daniel Carreon Viyada Doan Christel Hoest Stacey Knobler Mark A. Miller Stephanie Psaki Zeba Rasmussen

BackgroundEnteropathogen infections in early childhood not only cause diarrhoea but contribute to poor growth. We used molecular diagnostics assess whether particular enteropathogens were associated with linear growth across seven low-resource settings.MethodsWe quantitative PCR detect 29 diarrhoeal and non-diarrhoeal stools collected from children the first 2 years of life obtained during Etiology, Risk Factors, Interactions Enteric Infections Malnutrition Consequences for Child Health...

10.1016/s2214-109x(18)30351-6 article EN cc-by The Lancet Global Health 2018-10-01

Enteric infections are associated with linear growth failure in children. To quantify the association between intestinal inflammation and three commercially available enzyme-linked immunosorbent assays (neopterin [NEO], alpha-anti-trypsin [AAT], myeloperoxidase [MPO]) were performed a structured sampling of asymptomatic stool from children under longitudinal surveillance for diarrheal illness eight countries. Samples 537 contributed 1,169 AAT, 916 MPO, 954 NEO test results that significantly...

10.4269/ajtmh.2012.12-0549 article EN other-oa American Journal of Tropical Medicine and Hygiene 2012-11-27

Background. Enteropathogen infections have been associated with enteric dysfunction and impaired growth in children low-resource settings. In a multisite birth cohort study (MAL-ED), we describe the epidemiology impact of Campylobacter infection first 2 years life. Methods. Children were actively followed up until 24 months age. Diarrheal nondiarrheal stool samples collected tested by enzyme immunoassay for Campylobacter. Stool blood assayed markers intestinal permeability inflammation....

10.1093/cid/ciw542 article EN cc-by Clinical Infectious Diseases 2016-08-07

Giardia are among the most common enteropathogens detected in children low-resource settings. We describe here epidemiology of infection with first 2 years life Etiology, Risk Factors, and Interactions Enteric Infections Malnutrition Consequences for Child Health Development Project (MAL-ED), a multisite birth-cohort study.From 2089 children, 34916 stool samples collected during monthly surveillance episodes diarrhea were tested using an enzyme immunoassay. quantified risk detection,...

10.1093/jpids/piw082 article EN cc-by Journal of the Pediatric Infectious Diseases Society 2016-11-29

Individuals in the developing world live conditions of intense exposure to enteric pathogens due suboptimal water and sanitation. These environmental lead alterations intestinal structure, function, local systemic immune activation that are collectively referred as enteropathy (EE). This condition, although poorly defined, is likely be exacerbated by undernutrition well being responsible for permanent growth deficits acquired early childhood, vaccine failure, loss human potential. article...

10.1093/cid/ciu457 article EN Clinical Infectious Diseases 2014-10-10

Consumption of microbial-contaminated water can result in diarrheal illnesses and enteropathy with the heaviest impact upon children below age five. We aimed to provide a comprehensive analysis quality low-resource setting Limpopo province, South Africa. Surveys were conducted 405 households rural communities province determine their water-use practices, perceptions quality, household water-treatment methods. Drinking samples tested from for microbiological contamination. Water potential...

10.3390/w10020159 article EN Water 2018-02-07

Background. Norovirus is an important cause of childhood diarrhea. We present data from a longitudinal, multicountry study describing norovirus epidemiology during the first 2 years life. Methods. A birth cohort 1457 children across 8 countries contributed 7077 diarrheal stools for testing. subset 199 additional asymptomatic samples (2307) and (770), which were used to derive incidence rates evaluate evidence acquired immunity. Results. Across sites, 89% experienced at least 1 infection...

10.1093/cid/ciw072 article EN cc-by-nc-nd Clinical Infectious Diseases 2016-03-24

Fourteen plants used in traditional medicine the Venda region of South Africa were screened for activity against fifteen bacterial species. Methanol, acetone and hexane extracts some cases essential oils tested using disc diffusion microdilution methods. Most active at least one Methanol most while Gram positive bacteria sensitive as compared to negative bacteria. This study has revealed strong vitro Syzigium cordatum, Peltophorum africanum, Rhoicissus tridentata, Bridelia micrantha Ximenia...

10.5897/ajb2005.000-3191 article EN AFRICAN JOURNAL OF BIOTECHNOLOGY 2005-09-30

A central hypothesis of The Etiology, Risk Factors and Interactions Enteric Infections Malnutrition the Consequences for Child Health Development (MAL-ED) study is that enteropathogens contribute to growth faltering. To examine this question, MAL-ED network investigators set out achieve 3 goals: (1) develop harmonized protocols test a diverse range enteropathogens, (2) provide quality-assured comparable results from 8 global sites, (3) maximum laboratory throughput minimum cost. This paper...

10.1093/cid/ciu413 article EN Clinical Infectious Diseases 2014-10-10

Growth and development shortfalls that are disproportionately prevalent in children living poor environmental conditions postulated to result, at least part, from abnormal gut function. Using data The Etiology, Risk Factors, Interactions of Enteric Infections Malnutrition the Consequences for Child Health Development (MAL-ED) longitudinal cohort study, we examine biomarkers inflammation permeability relation exposures feeding practices. Trends concentrations three biomarkers, myeloperoxidase...

10.4269/ajtmh.16-0496 article EN cc-by American Journal of Tropical Medicine and Hygiene 2016-12-20

Background Enteroaggregative E. coli (EAEC) have been associated with mildly inflammatory diarrhea in outbreaks and travelers increasingly recognized as enteric pathogens young children without overt diarrhea. We examined the risk factors for EAEC infections their associations environmental enteropathy biomarkers growth outcomes over first two years of life eight low-resource settings MAL-ED study. Methods were detected by PCR gene probes aatA aaiC virulence traits 27,094 non-diarrheal...

10.1371/journal.pntd.0005798 article EN public-domain PLoS neglected tropical diseases 2017-07-24

Culture-independent diagnostics have revealed a larger burden of Shigella among children in low-resource settings than previously recognized. We further characterized the epidemiology first two years life multisite birth cohort. tested 41,405 diarrheal and monthly non-diarrheal stools from 1,715 for by quantitative PCR. To assess risk factors, clinical factors related to age culture positivity, associations with inflammatory biomarkers, we used log-binomial regression generalized estimating...

10.1371/journal.pntd.0008536 article EN cc-by PLoS neglected tropical diseases 2020-08-17

Cryptosporidium species are enteric protozoa that cause significant morbidity and mortality in children worldwide. We characterized the epidemiology of from 8 resource-limited sites Africa, Asia, South America.Children were enrolled within 17 days birth followed twice weekly for 24 months. Diarrheal monthly surveillance stool samples tested by enzyme-linked immunosorbent assay. Socioeconomic data collected survey, anthropometry was measured monthly.Sixty-five percent (962/1486) had a...

10.1093/cid/ciy355 article EN cc-by Clinical Infectious Diseases 2018-04-24

BACKGROUND AND OBJECTIVES: Astroviruses are important drivers of viral gastroenteritis but remain understudied in community settings and low- middle-income countries. We present data from 8 countries with high prevalence diarrhea undernutrition to describe astrovirus epidemiology assess evidence for protective immunity among children 0 2 years age. METHODS: used 25 898 surveillance stools 7077 diarrheal contributed by 2082 enteropathogen testing, longitudinal statistical analysis incidence,...

10.1542/peds.2017-1326 article EN PEDIATRICS 2017-12-19

Dengue virus (DENV) causes a spectrum of diseases ranging from asymptomatic, mild febrile to life-threatening illness: dengue hemorrhagic fever. The main clinical symptom is fever, similar that malaria. prevalence infection, alone or in association with other endemic infectious children Cameroon unknown. aim this study was determine the dengue, malaria and HIV presenting fever associated risk factors. overall 20.2%, Malaria cases were 52.7% represented 12.6%. dengue-HIV co-infection 6.0%...

10.1371/journal.pntd.0009316 article EN cc-by PLoS neglected tropical diseases 2021-04-16

Green synthesis using plant extracts has emerged as an eco-friendly, clean, and viable alternative to chemical physical approaches. Herein, the leaf, stem, root of Lannea discolor were utilized a reducing stabilizing agent in synthesizing gold (AuNPs) copper (CuNPs) nanoparticles. The formation AuNPs CuNPs, confirmed by their color change, was characterized UV-Vis spectroscopy (UV-Vis), scanning electron microscopy analysis, energy-dispersive X-ray (SEM-EDX), transmission (TEM),...

10.3390/inorganics12020036 article EN cc-by Inorganics 2024-01-24

Waterborne pathogens present a significant threat to people living with the human immunodeficiency virus (PLWH). This study presents randomized, controlled trial that evaluates whether household-level ceramic water filter (CWF) intervention can improve drinking quality and decrease days of diarrhea in PLWH rural South Africa. Seventy-four participants were randomized an group CWFs control without filters. Participants CWF arm received impregnated silver nanoparticles associated safe-storage...

10.2166/wh.2013.185 article EN Journal of Water and Health 2013-09-06
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