Rongqin Zhang

ORCID: 0009-0000-1570-3292
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About
Contact & Profiles
Research Areas
  • Genomics and Phylogenetic Studies
  • Single-cell and spatial transcriptomics
  • RNA modifications and cancer
  • SARS-CoV-2 and COVID-19 Research
  • CRISPR and Genetic Engineering
  • Plant Virus Research Studies
  • Peptidase Inhibition and Analysis
  • Genetic diversity and population structure
  • Radiomics and Machine Learning in Medical Imaging
  • Drug Solubulity and Delivery Systems
  • Cell Image Analysis Techniques
  • SARS-CoV-2 detection and testing
  • Biosensors and Analytical Detection
  • Protease and Inhibitor Mechanisms
  • Cardiac Structural Anomalies and Repair
  • Bioinformatics and Genomic Networks
  • Biomedical Text Mining and Ontologies
  • Analytical Methods in Pharmaceuticals
  • Viral Infections and Immunology Research
  • Colorectal Cancer Surgical Treatments
  • Advanced Drug Delivery Systems
  • Cancer Genomics and Diagnostics
  • Genetic Mapping and Diversity in Plants and Animals
  • Advanced X-ray and CT Imaging
  • Gene expression and cancer classification

Sixth Affiliated Hospital of Sun Yat-sen University
2023-2024

Sun Yat-sen University
2023-2024

University of Chinese Academy of Sciences
2021-2023

Sun Yat-sen University Cancer Center
2023

Beijing Institute of Genomics
2021-2023

Shanghai Center For Bioinformation Technology
2021-2022

Chinese Academy of Sciences
2021-2022

Sichuan University
2006

GWAS Atlas (https://ngdc.cncb.ac.cn/gwas/) is a manually curated resource of genome-wide genotype-to-phenotype associations for wide range species. Here, we present an updated implementation by curating and incorporating more high-quality associations, with significant improvements advances over the previous version. Specifically, current release incorporates total 278,109 1,444 different traits across 15 species (10 plants 5 animals) from 830 publications 3,432 studies. A collection 6,084...

10.1093/nar/gkac924 article EN cc-by-nc Nucleic Acids Research 2022-10-20

Single-cell studies have delineated cellular diversity and uncovered increasing numbers of previously uncharacterized cell types in complex tissues. Thus, synthesizing growing knowledge characteristics is critical for dissecting heterogeneity, developmental processes tumorigenesis at single-cell resolution. Here, we present Cell Taxonomy (https://ngdc.cncb.ac.cn/celltaxonomy), a comprehensive curated repository associated markers encompassing wide range species, tissues conditions. Combined...

10.1093/nar/gkac816 article EN cc-by-nc Nucleic Acids Research 2022-09-26

The Resource for Coronavirus 2019 (RCoV19) is an open-access information resource dedicated to providing valuable data on the genomes, mutations, and variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this updated implementation RCoV19, we have made significant improvements advancements over previous version. Firstly, implemented a highly refined genome curation model. This model now features automated integration pipeline optimized rules, enabling efficient daily...

10.1016/j.gpb.2023.10.004 article EN cc-by Genomics Proteomics & Bioinformatics 2023-10-01

Brain is the central organ of nervous system and any brain disease can seriously affect human health. Here we present BrainBase (https://ngdc.cncb.ac.cn/brainbase), a curated knowledgebase for diseases that aims to provide whole picture associated genes. Specifically, based on manual curation 2768 published articles along with information retrieval from several public databases, features comprehensive collection 7175 disease-gene associations spanning total 123 linking 5662 genes, 16 591...

10.1093/nar/gkab987 article EN cc-by-nc Nucleic Acids Research 2021-10-08

Microregion pH of semi-solid preparations such as ointments, creams, gels can be revealed by pH-sensitive surface enhanced Raman scattering microtips.

10.1039/d4ay01523a article EN Analytical Methods 2024-01-01

Abstract The Resource for Coronavirus 2019 (RCoV19, https://ngdc.cncb.ac.cn/ncov/ ) is an open-access information resource dedicated to providing valuable data on the genomes, mutations, and variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this updated implementation RCoV19, we have made significant improvements advancements over previous version. Firstly, implemented a highly refined genome curation model. This model now features automated integration pipeline...

10.1101/2023.09.24.558358 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-09-26

Abstract Background Colorectal cancer is the third-most common type of cancer. When peritoneal metastasis (PM) develops, diagnosing metastatic lesions difficult and prognosis poor. This study aimed to compare value fluorine-18 fibroblast activation protein-specific inhibitor (18F-FAPI-42) fluorodeoxyglucose (18F-FDG) positron emission tomography/computed tomography (PET/CT) for detecting PM colorectal guide clinical decision-making. Methods Forty-eight patients with who underwent both...

10.1093/gastro/goae104 article EN cc-by-nc Gastroenterology report 2023-12-22
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