Bin Lu

ORCID: 0000-0003-0272-3256
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About
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Research Areas
  • Plant and animal studies
  • Amphibian and Reptile Biology
  • Genetic diversity and population structure
  • Species Distribution and Climate Change
  • Functional Brain Connectivity Studies
  • Genomics and Phylogenetic Studies
  • Neurobiology and Insect Physiology Research
  • Plant Virus Research Studies
  • Plant Molecular Biology Research
  • Plant Gene Expression Analysis
  • Insect and Arachnid Ecology and Behavior
  • Animal Behavior and Reproduction
  • Advanced Neuroimaging Techniques and Applications
  • Advanced MRI Techniques and Applications
  • Identification and Quantification in Food
  • Plant biochemistry and biosynthesis
  • Mental Health Research Topics
  • Plant tissue culture and regeneration
  • Legume Nitrogen Fixing Symbiosis
  • Fungal Biology and Applications
  • Wildlife Ecology and Conservation
  • Physiological and biochemical adaptations
  • Fermentation and Sensory Analysis
  • Stress Responses and Cortisol
  • Genomics and Chromatin Dynamics

Hebei University
2025

University of Chinese Academy of Sciences
2019-2024

Chinese Academy of Sciences
2014-2024

Chengdu Institute of Biology
2014-2024

Institute of Psychology, Chinese Academy of Sciences
2020-2024

Southwest Forestry University
2022-2024

Hebei Agricultural University
2018-2024

Yunnan Academy of Forestry
2019-2024

Czech Academy of Sciences, Institute of Psychology
2019-2023

Kunming Institute of Botany
2021-2022

Abstract Aberrant topological organization of whole-brain networks has been inconsistently reported in studies patients with major depressive disorder (MDD), reflecting limited sample sizes. To address this issue, we utilized a big data MDD from the REST-meta-MDD Project, including 821 and 765 normal controls (NCs) 16 sites. Using Dosenbach 160 node atlas, examined functional extracted features (e.g., global local efficiency, nodal degree) using graph theory-based methods. Linear...

10.1038/s41380-021-01247-2 article EN cc-by Molecular Psychiatry 2021-08-12

Significance Why is polyploidization rarer in animals than plants? This question remains unanswered due to the absence of a suitable system for studying instantaneous and crucial changes that immediately follow hybridization. RNA-seq analyses discover extensive chimeric genes immediate mutations orthologs both diploid tetraploid offspring goldfish (♀) × common carp (♂) hybrids. Overall, show paternal-biased expression, yet tetraploids maternal-biased expression. Some differentially expressed...

10.1073/pnas.1512955113 article EN Proceedings of the National Academy of Sciences 2016-01-14

Rumination is a repetitive self-referential thinking style that often interpreted as an expression of abnormalities the default mode network (DMN) observed during "resting-state" in major depressive disorder (MDD). Recent evidence has demonstrated DMN not unitary but can be further divided into 3 functionally heterogenous subsystems, although subsystem mechanistically underlying rumination remains unclear. Due to unconstrained and indirect correlational nature previous resting-state fMRI...

10.1016/j.neuroimage.2020.117185 article EN cc-by-nc-nd NeuroImage 2020-07-22

A highly sensitive and selective near-infrared excited potassium nanosensor has been developed for brain activity monitoring.

10.1126/sciadv.aax9757 article EN cc-by-nc Science Advances 2020-04-17

Abstract Despite a growing neuroimaging literature on the pathophysiology of major depressive disorder (MDD), reproducible findings are lacking, probably reflecting mostly small sample sizes and heterogeneity in analytic approaches. To address these issues, Depression Imaging REsearch ConsorTium (DIRECT) was launched. The REST-meta-MDD project, pooling 2428 functional brain images processed with standardized pipeline across all participating sites, has been first effort from DIRECT. In this...

10.1093/psyrad/kkac005 article EN cc-by Deleted Journal 2022-03-01

The heat treatment has significant effect on the sensory and flavor quality of Boletus edulis product. We evaluated properties volatile compounds (VFCs) six dried products subjected to different temperatures, as well correlation VFCs with Maillard reaction products. color samples turned brown drying temperature increased, content seventeen free amino acids (FAAs) five monosaccharides decreased simultaneously. When compared vacuum methods, Arg Glu reduced significantly, reaching its lowest...

10.1016/j.lwt.2024.116055 article EN cc-by-nc LWT 2024-04-01

Abstract We present a high‐quality genome assembly for the Asiatic toad ( Bufo gargarizans ) and explore evolution of several large gene families in amphibians. With size 4.55 Gb, chromosome‐scale includes 747 scaffolds with an N50 539.8 Mb 1.79% gaps. Long terminal repeats (LTRs) constitute high proportion their expansion is key contributor to inflated this species. This very different from other small amphibian genomes, but similar that enormous axolotl genome. The retains number...

10.1111/1755-0998.13319 article EN Molecular Ecology Resources 2021-01-15

Abstract The Cephalopoda are a group of highly diverse marine species in the phylum Mollusca, which distributed worldwide. They have evolved some vertebrate‐like biological traits and exhibit complicated behavioural repertoires. Thus, they interesting for studying mechanisms evolutionary convergence, innovational functional structures adaptation to active, predatory lifestyle environments. Despite placement significance cephalopods, genomic data on these organisms remain limited. Here, we...

10.1111/1755-0998.13216 article EN Molecular Ecology Resources 2020-06-30

Abstract In the animal kingdom, sexually dimorphic color variation is a widespread phenomenon that significantly influences survival and reproductive success. However, genetic underpinnings of this remain inadequately understood. Our investigation into in desert-dwelling Guinan population toad-headed agamid lizard (Phrynocephalus putjatai) utilized multidisciplinary approach, encompassing phenotypic, ultrastructural, biochemical, genomic analyses, behavioral experiments. findings unveil...

10.1093/molbev/msae054 article EN cc-by-nc Molecular Biology and Evolution 2024-03-01

Pyrus pyrifolia Nakai. 'Whangkeumbae' belongs to sand pear fruit with excellent nutritional quality and taste. However, the industrial development of is significantly limited by its short shelf life. Salicylic acid (SA), a well-known phytohormone, can delay senescence improve Meanwhile, how SA regulates CONSTANS-LIKE genes (COLs) during role COL in mediating are poorly understood. In this study, 22 were identified pear, including 4 COLs (PpCOL8, PpCOL9a, PpCOL9b, PpCOL14) via transcriptome...

10.1016/j.jia.2024.01.011 article EN cc-by-nc-nd Journal of Integrative Agriculture 2024-01-06

ABSTRACT Drought is a major threat to wheat production. Utilising microbial inoculant technology enhance crop drought resistance achieve high yield has emerged as promising strategy. Dark septate endophytes (DSEs) can improve plant resistance; however, there little research on the DSE preparation. In this study, two dominant strains, Alternaria alstroemeriae ( Aa ) and Paraphoma chrysanthemicola Pc were screened through inoculation experiment of under stress. Finally, optimal embedding...

10.1111/jac.70051 article EN Journal of Agronomy and Crop Science 2025-03-01

Abstract Orogenesis of topographically diverse montane regions often drives complex evolutionary histories species. The extensive biodiversity the eastern edge Tibetan Plateau, which gradually decreases eastwardly, facilitates a comparison historical patterns. We use coalescence methods to compare species stream salamanders ( Batrachuperus ) that occur at high and low elevations. Coalescent simulations reveal closely related are likely have been influenced by different drivers...

10.1111/j.1365-294x.2012.05606.x article EN Molecular Ecology 2012-05-09

Aroma is central to the worldwide success of truffles as gourmet food and high prices paid for these edible mushrooms. In this study, volatile organic compounds (VOCs) from fruiting bodies two Chinese commercial relevance, Tuber indicum pseudohimalayense, were analyzed using headspace solid-phase microextraction (HS-SPME) coupled with gas chromatography-mass spectrometry (GC-MS). We aimed characterize aroma profile determine whether it would be influenced by provenance stage maturation. thus...

10.1016/j.fshw.2021.02.005 article EN cc-by-nc-nd Food Science and Human Wellness 2021-03-01

Drought constitutes a major abiotic stress factor adversely affecting plant growth and productivity. Plant-microbe symbiotic associations have evolved regulatory mechanisms to adapt environmental conditions. However, the interactive effects of different fungi on host tolerance under drought conditions remain unclear.

10.3389/fpls.2024.1446437 article EN cc-by Frontiers in Plant Science 2024-08-20

The phylogenetic position of turtles within the vertebrate tree life remains controversial. Conflicting conclusions from different studies are likely a consequence systematic error in construction process, rather than random small amounts data. Using genomic data, we evaluate with both conventional concatenated data analysis and "genes as characters" approach. Two datasets were constructed, one seven species (human, opossum, zebra finch, chicken, green anole, Chinese pond turtle, western...

10.1371/journal.pone.0079348 article EN cc-by PLoS ONE 2013-11-21

Because visual genes likely evolved in response to their ambient photic environment, the dichotomy between closely related nocturnal moths and diurnal butterflies forms an ideal basis for investigating evolution. To investigate whether of are associated with dim-light environments or not, we cloned long-wavelength (R), blue (B) ultraviolet (UV) opsin from 12 species wild-captured examined evolutionary functions. Strong purifying selection appeared constrain functions genes. Dark-treatment...

10.1371/journal.pone.0078140 article EN cc-by PLoS ONE 2013-10-30

Abstract Aphis gossypii , one of the most important agricultural pests in world, can cause serious economic losses main crop-producing areas. To clarify issues such as genetic differentiation, structure, and demographic history A. populations, we used 10 nuclear microsatellite loci (SSR) two mitochondrial gene sequences ( COI Cytb ) to investigate diversity population structure populations that were collected from 33 sampling sites China different climatic zones. SSR mtDNA data suggested low...

10.1038/s41598-017-02105-4 article EN cc-by Scientific Reports 2017-05-09

Abstract Species are considered to be the basic unit of ecological and evolutionary studies. As multilocus genomic data increasingly available, there have been considerable interests in use DNA sequence delimit species. In this study, we show that machine learning can used for species delimitation. Our method treats delimitation problem as a classification identifying category new observation on basis training data. Extensive simulation is first conducted over broad range parameters...

10.1111/1755-0998.12887 article EN Molecular Ecology Resources 2018-04-18

Abstract Background The interactions of fig wasps and their host figs provide a model for investigating co-evolution. Fig have specialized morphological characters lifestyles thought to be adaptations living in the fig's syconium. Although these aspects natural history are well documented, genetic mechanism(s) underlying changes remain(s) unknown. wasp olfaction is key host-specificity. Or83b gene class, an unusual member olfactory receptor family, plays critical role enabling function...

10.1186/1471-2148-9-43 article EN cc-by BMC Evolutionary Biology 2009-02-20

Quaternary climatic oscillations and geography are of primary importance in shaping intraspecific genetic diversity. We examined the diversification patterns inferred processes for green odorous frog (Odorrana margaretae) western China. Species distribution modelling showed that species has a continuous circular around Sichuan Basin while basin itself is largely uninhabitable. Population phylogenetic analyses revealed ring-shaped divergent pattern. While chain populations maintains mostly...

10.1111/mec.14899 article EN Molecular Ecology 2018-10-16

Retrotransposed genes are different to other types of as they originate from a processed mRNA and then inserted back into the genome. For long time, contribution this mechanism origin new genes, hence evolutionary process, has been questioned retrogenes usually lose their regulatory sequences upon insertion generally decay pseudogenes. In recent years, there is growing evidence, notably in mammals, that retrotransposition an important process driving but evidence insects remains largely...

10.1186/s13100-016-0074-8 article EN cc-by Mobile DNA 2016-10-19
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