Nairouz Farah

ORCID: 0000-0003-3227-2628
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About
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Research Areas
  • Neuroscience and Neural Engineering
  • Photoreceptor and optogenetics research
  • Retinal Development and Disorders
  • Neural dynamics and brain function
  • Visual perception and processing mechanisms
  • EEG and Brain-Computer Interfaces
  • 3D Printing in Biomedical Research
  • Advanced Fluorescence Microscopy Techniques
  • Advanced Memory and Neural Computing
  • CCD and CMOS Imaging Sensors
  • Ultrasound and Hyperthermia Applications
  • Tactile and Sensory Interactions
  • Optical Imaging and Spectroscopy Techniques
  • Ocular and Laser Science Research
  • Retinal Diseases and Treatments
  • Advanced Electron Microscopy Techniques and Applications
  • Vagus Nerve Stimulation Research
  • Microbial Inactivation Methods
  • Color Science and Applications
  • Spaceflight effects on biology
  • Photochromic and Fluorescence Chemistry
  • Neurobiology and Insect Physiology Research
  • Photoacoustic and Ultrasonic Imaging
  • Hydrogen's biological and therapeutic effects
  • Ultrasound in Clinical Applications

Bar-Ilan University
2015-2024

Alzheimer's Association of Israel
2020

Technion – Israel Institute of Technology
2007-2016

Computer-generated holography is an emerging technology for stimulation of neuronal populations with light patterns. A holographic photo-stimulation system may be designed as a powerful research tool or compact neural interface medical device, such optical retinal prosthesis. We present here overview the main design issues including choice field-of-view, resolution, physical size, generation two- and three-dimensional patterns their diffraction efficiency, algorithms computational effort....

10.1088/1741-2560/6/6/066004 article EN Journal of Neural Engineering 2009-10-16

Recent studies highlight the importance of temporal domain in visual processing. Critical Flicker-Fusion Frequency (CFF), frequency at which a flickering light is perceived as continuous, widely used for evaluating However, substantial variability psychophysical paradigms, measuring CFF, leads to reported results. Here, we report on comprehensive comparison CFF measurements through three different paradigms: methods limits; method constant stimuli, and staircase method. Our results...

10.1038/s41598-017-15034-z article EN cc-by Scientific Reports 2017-11-09

Patterned photo-stimulation offers a promising path towards the effective control of distributed neuronal circuits. Here, we demonstrate feasibility and governing principles spatiotemporally patterned microscopic photo-absorber induced neural-thermal stimulation (PAINTS) based on light absorption by exogenous extracellular photo-absorbers.We projected holographic patterns from green continuous-wave (CW) or an IR femtosecond laser onto photo-absorbing particles dispersed in vicinity cultured...

10.1088/1741-2560/10/5/056004 article EN Journal of Neural Engineering 2013-07-31

Aim: Longitudinal tracking of transplanted cells in clinical and experimental setups is crucial for evaluating the efficiency retinal cell replacement therapies. Materials & methods: Gold nanoparticle-labeled photoreceptor precursors were vitreous subretinal space rats longitudinally tracked over a month using optical coherence tomography, computed tomography fluorescence fundus imaging. Results: This multimodal imaging approach enabled high-resolution long-term estimation survival retina...

10.2217/nnm-2018-0299 article EN Nanomedicine 2019-07-01

Neuroprosthetic retinal interfaces depend upon the ability to bypass damaged photoreceptor layer and directly activate populations of ganglion cells (RGCs). To date, preferred approach this task largely relies on electrode array implants. We are currently pursuing two alternative methods for light-based direct activation RGCs. The first method is based applying caged glutamate over retina uncaging it locally obtain RGC excitation. second artificially cause RGCs express Channelrhodopsin II...

10.1109/iembs.2007.4353812 article EN Conference proceedings 2007-08-01

Non-invasive fluorescence retinal imaging in small animals is an important requirement for array of translational vision applications. The vivo two-photon the mouse retina may enable long-term investigation structure and function healthy diseased tissue. However, to date, this has only been possible using relatively complex adaptive-optics systems. Here, optical modeling murine eye system used achieve correction-free microscopy through pupil a yield high-quality, optically sectioned fundus...

10.1038/lsa.2016.7 article EN cc-by-nc-nd Light Science & Applications 2016-01-01

Integration of information over the CNS is an important neural process that affects our ability to perceive and react environment. The visual system required continuously integrate arriving from two different sources (the eyes) create a coherent percept with high spatiotemporal precision. Although this integration assumed be critical for performance, it can impaired under some pathological or developmental conditions. Here we took advantage unique condition, amblyopia ("lazy eye"), which...

10.1016/j.isci.2023.105960 article EN cc-by-nc-nd iScience 2023-01-12
J. Brian Fowlkes Pejman Ghanouni Narendra T. Sanghvi Constantin Coussios Paul Lyon and 95 more Michael Gray Christophoros Mannaris Marie de Saint Victor Eleanor Stride Robin O. Cleveland Robert Carlisle Feng Wu Mark R. Middleton Fergus Gleeson Jean-Franҫois Aubry Kim Butts Pauly Chrit Moonen Jacob Vortman Pejman Ghanouni Shirley Sharabi Dianne Daniels David Last David Guez Yoav Levy Alexander Volovick Javier Grinfeld Itay Rachmilevich Talia Amar Zion Zibly Yael Mardor Sagi Harnof Michael Plaksin Yoni Weissler Shy Shoham Eitan Kimmel Omer Naor Nairouz Farah Shy Shoham Dong‐Guk Paeng Zhiyuan Xu John Snell Anders Quigg Matthew Eames Changzhu Jin Ashli Everstine Jason P. Sheehan Beatriz S. Lopes Neal F. Kassell Thomas Looi Vera A. Khokhlova Charles Mougenot Kullervo Hynynen James M. Drake Michael H. Slayton Richard C. Amodei Keegan B. Compton Ashley McNelly L. Daniel Latt Michael H. Slayton Richard C. Amodei Keegan B. Compton John Kearney David Melodelima Aurélien Dupré Yao Chen David Pérol Jérémy Vincenot Jean‐Yves Chapelon Michel Rivoire Wei Guo Guoxin Ren Guofeng Shen Michael Neidrauer Leonid Zubkov Michael S. Weingarten David J. Margolis Peter A. Lewin Nathan McDannold Jonathan Sutton Natalia Vykhodtseva Margaret S. Livingstone Thiele Kobus Yongzhi Zhang Natalia Vykhodtseva Nathan McDannold Michael L. Schwartz Yuexi Huang Nir Lipsman Jennifer Jain Martin Chapman Tejas Sankar Andrés M. Lozano Kullervo Hynynen Michael L. Schwartz Robert Yeung Yuexi Huang Nir Lipsman Jennifer Jain Martin Chapman Andrés M. Lozano

10.1186/s40349-016-0079-2 article EN Journal of Therapeutic Ultrasound 2017-03-17

Optogenetic perturbation has become a fundamental tool in controlling activity neurons. Used to control cell cultures, slice preparations, anesthetized and awake behaving animals, optical of cell-type specific enables the interrogation complex systems. A remaining challenge developing tools is ability produce defined light patterns such that power-efficient, precise neuronal populations obtained. Here, we describe system for patterned stimulation generation structured neurons by transmitting...

10.1117/1.nph.2.4.045002 article EN Neurophotonics 2015-11-06

Abstract Studies have shown that Perceptual Learning (PL) can lead to enhancement of spatial visual functions in amblyopic subjects. Here we aimed determine whether a simple flickering stimulus be utilized PL enhance temporal function performance and will transfer Six adult six normally sighted subjects underwent an evaluation their baseline psychophysics (Visual acuity (VA), contrast sensitivity (CS), (critical fusion frequency (CFF) test), as well static stereopsis test,...

10.1038/s41598-023-34421-3 article EN cc-by Scientific Reports 2023-05-11

Tissue-integrated micro-electronic devices for neural stimulation hold great potential in restoring the functionality of degenerated organs, specifically, retinal prostheses, which are aimed at vision restoration. The fabrication process 3D polymer-metal with high resolution and a aspect-ratio (AR) is very complex faces many challenges that impair its functionality.Here we describe optimization bio-functionalized high-resolution 1mm circular subretinal implant composed SU-8 polymer...

10.1186/s13036-023-00370-8 article EN cc-by Journal of Biological Engineering 2023-08-24

Abstract The enteric nervous system (ENS) senses microbiota-derived signals and orchestrates mucosal immunity epithelial barrier functions, in health disease. However, mechanistic dissections of intestinal neuro-immune-microbiota communications remain challenging existing research methods limit experimental controllability throughput. Here, we present a novel optogenetics-integrated gut organ culture that enables real-time, whole-tissue stimulation specific ENS lineages, allowing for...

10.1101/2024.03.28.587149 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2024-03-30

Purpose: : To acquire and characterize cellular-resolved in vivo fluorescence images of optogenetic probes expressed rodent retinal ganglion cells, by adapting a low-cost simple fundus system based on topical endoscope. Methods: A custom endoscope-based was constructed (adapted from the design Paques colleagues). Bright field were acquired head-fixed transgenic mice expressing Channelrhodopsin2-eYFP, Sprague Dawley rats virally transfected with probe GCaMP3. Images compared to vitro same...

10.1167/tvst.1.2.4 article EN Translational Vision Science & Technology 2012-09-01

Objective. Rational design of next-generation techniques for photo-thermal excitation requires the development tools capable modeling effects spatially- and temporally-dependent temperature distribution on cellular neuronal structures. Approach. We present a new computer simulation tool predicting arbitrary spatiotemporally-structured stimulation 3D, morphologically realistic neurons. The is based interfacing two generic platforms, NEURON MATLAB therefore suited capturing different kinds...

10.1088/1741-2552/aa7805 article EN Journal of Neural Engineering 2017-08-18

Abstract Novel technologies are constantly under development for vision restoration in blind patients. Many of these emerging based on the projection high intensity light patterns at specific wavelengths, raising need specialized systems. Here we present and characterize a novel system that meets requirements artificial retinal stimulation rats enables recording cortical responses. The is customized miniature Digital Mirror Device (DMD) pattern projection, both visible (525 nm) NIR (915 lens...

10.1038/srep34873 article EN cc-by Scientific Reports 2016-10-12

Carbon nanomaterials have been introduced as a scaffold for various biological applications due to their unique physical and electrical properties.

10.1039/d0nr02256j article EN Nanoscale 2020-01-01

Tissue and neural engineering for various regenerative therapies are rapidly growing fields. Of major interest is studying the complex interface between cells 3D structures by scanning electron microscopy with focused ion beam. Notwithstanding its unrivaled resolution, optimal fixation, dehydration, staining protocols of samples while preserving cell in natural form, highly challenging. The aim this work was to compare optimize sample drying procedures order preserve their "life-like state"...

10.1002/dneu.22707 article EN Developmental Neurobiology 2019-06-22

Hemorrhagic shock accounts for 30-40 percent of trauma mortality, as bleeding may sometimes be hard to control. Application short electrical pulses on blood vessels was recently shown elicit robust vasoconstriction and reduction loss following vascular injury. In this study we present a novel approach based endovascular application situations where access the vessel is limited. addition ease access, hypothesize that will result in localized efficient vasoconstriction. Using computer modeling...

10.1038/srep31507 article EN cc-by Scientific Reports 2016-08-18

Neuroprosthetic retinal interfaces depend upon the ability to bypass damaged photoreceptor layer and directly activate populations of ganglion cells (RGCs). Current approaches this task largely rely on electrode array implants. We are pursuing an alternative, light-based approach towards direct activation RGCs, by artificially causing them express Channelrhodopsin II (ChR2), a light-gated cation channel. In addition being non-contact, optical techniques lend themselves relatively easily...

10.1109/cne.2007.369609 article EN 2007-05-01

Objective: In this study, we present a novel approach for inducing vasoconstriction by pulsed electrical treatment delivered via endovascular electrodes, which can be used in cases where external access to the vessel is limited. Methods: Using computer simulations, optimized various geometries of electrodes maximize induced electric field on arterial wall. optimal configuration parameters, investigated both carotid and femoral sheep arteries. Results: Endovascular robust artery sheep,...

10.1109/tbme.2018.2883212 article EN IEEE Transactions on Biomedical Engineering 2018-11-23

Purpose: Photoreceptor precursor cells (PRPs) differentiated from human embryonic stem can serve as a source for cell replacement therapy aimed at vision restoration in patients suffering degenerative diseases of the outer retina, such retinitis pigmentosa and AMD. In this work, we studied electrophysiologic maturation PRPs throughout differentiation process. Methods: Human were into whole-cell recordings performed characterization days 0, 30, 60, 90 along with quantitative PCR analysis to...

10.1167/iovs.61.11.44 article EN cc-by-nc-nd Investigative Ophthalmology & Visual Science 2020-09-29
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