A5089486134- Molecular Communication and Nanonetworks
- Wireless Body Area Networks
- Advanced biosensing and bioanalysis techniques
- Energy Harvesting in Wireless Networks
- Gene Regulatory Network Analysis
- Genetic Associations and Epidemiology
- Genetic Mapping and Diversity in Plants and Animals
- Gene expression and cancer classification
- Bioinformatics and Genomic Networks
- Genetic and phenotypic traits in livestock
- Microfluidic and Capillary Electrophoresis Applications
- Robotics and Sensor-Based Localization
- Pregnancy and preeclampsia studies
- BRCA gene mutations in cancer
- Innovative Microfluidic and Catalytic Techniques Innovation
- Algorithms and Data Compression
- RNA modifications and cancer
- Birth, Development, and Health
- Health, Environment, Cognitive Aging
- Neuroscience and Neural Engineering
- Advanced Image and Video Retrieval Techniques
- Quantum-Dot Cellular Automata
- Genomics and Phylogenetic Studies
- Advanced Vision and Imaging
- Global Cancer Incidence and Screening
Oslo University Hospital
2022-2024
University of Oslo
2020-2024
Boğaziçi University
2013-2021
Yale University
2021
Institut national de recherche en informatique et en automatique
2018-2021
Université Claude Bernard Lyon 1
2018-2021
Institut National des Sciences Appliquées de Lyon
2018-2021
Laboratoire d’Informatique et Systèmes
2019
Citigroup
2019
Istanbul Bilgi University
2015
Abstract Background The Norwegian Mother, Father, and Child Cohort Study (MoBa) is a population-based pregnancy cohort, which includes approximately 114,500 children, 95,200 mothers, 75,200 fathers. Genotyping of MoBa has been conducted through multiple research projects, spanning several years; using varying selection criteria, genotyping arrays, centres. contains numerous interrelated families, necessitated the implementation family-based quality control (QC) pipeline that verifies...
This letter proposes a simple and novel method for mitigating inter-symbol interference (ISI) in molecular communication via diffusion (MCvD). In MCvD applications, the messenger molecules released from transmitter need some time to reach receiver. Therefore, absorbed at beginning of transmission interval can only belong previous transmissions. if receiver shifts its absorption interval, ISI be potentially reduced. We find optimal delay that both numerically analytically minimize channel....
Molecular Communication via Diffusion (MCvD) is a prominent small-scale technology, which roots from the nature. With solid analytical foundations on channel response and advanced modulation techniques, molecular single-input-single-output (SISO) systems are one of most studied networks in literature. However, literature yet to provide sufficient modeling multiple-output with fully absorbing receivers, common applications area. In this paper, model for single-input-multiple-output (SIMO)...
Molecular communication via diffusion in vessel-like environment targets critical applications such as the detection of abnormal and unhealthy cells. In this letter, we derive analytical formulation channel model for dominated movement, considering ring-shaped (i.e., patch) observing receivers, Poiseuille flow with aim localization transmitter cell. Then, formulations using two different application scenarios. We assume that emission start time is known first scenario unknown second one....
In this paper, the impulse response for a 3-D microfluidic channel in presence of Poiseuille flow is obtained by solving diffusion equation radial coordinates. Using distribution, axial distribution then approximated accordingly. Since velocity changes with position, molecules have different properties distributions. We, therefore, present piecewise function considering distribution. Finally, we lay evidence our theoretical derivations and through comparing them using various Monte Carlo simulations.
One promising technique for communicating at the nanoscale is molecular communication (MC). In a molecular-communication-via-diffusion-scenario, memory component of channel very high. This gives rise to what known as inter-symbol interference. Traditional coding schemes cannot be utilized in MC due high memory. this paper, novel low complexity method proposed domain. The design code takes into account capability nano-device and characteristics channel. Simulation results confirm that...
In this letter, we derive the impulse response of diffusion channel with a spherical absorbing receiver, reflective boundary, and point transmitter in molecular communication domain. The proposed model fits geometrically well intra-cellular environment can be further extended to other cases by applying small deformations sphere. By exploring characteristics drawing comparisons unbounded case, show consequences having boundary on properties, such as peak time, amplitude, fraction molecules...
To communicate at the nanoscale, researchers have proposed molecular communication as an energy-efficient solution. The drawback to this solution is that histogram of molecules' hitting times, which constitute signal receiver, has a heavy tail. Reducing effects tail, inter-symbol interference (ISI), been focus most prior research. In paper, novel way decreasing ISI by defining counting region on spherical receiver's surface facing toward transmitter node proposed. beneficial effect comes...
Abstract Summary The collection and analysis of sensitive data in large-scale consortia for statistical genetics is hampered by multiple challenges, due to their non-shareable nature. Time-consuming issues installing software frequently arise different operating systems, dependencies, limited internet access. For federated across sites, it can be challenging resolve problems, including format requirements, wrangling, setting up on high-performance computing (HPC) facilities, etc. Easier,...
Genome-wide association studies (GWAS) implicate broad genomic loci containing clusters of highly correlated genetic variants. Finemapping techniques can select and prioritize variants within each GWAS locus which are more likely to have a functional influence on the trait. Here, we present novel method, Finemap-MiXeR, for finemapping causal from summary statistics, controlling correlation among due linkage disequilibrium. Our method is based variational Bayesian approach direct optimization...
A basic property of any diffusion-based molecular communication system is the geometry enclosing container. In particular, influences system's behavior near boundary and in all existing modulation schemes governs receiver design. However, it not always straightforward to characterize system. This particularly case when operates scenarios where may be complex or dynamic. this article, we propose a new scheme-called equilibrium signaling-which robust uncertainties fluid boundary. design only...
Abstract This paper proposes 2 novel network coding approaches for diffusion‐based nanonetworks. In these methods, messages from nanomachines are jointly decoded at the receiver, and in one of methods multiple molecule types simultaneously employed to provide simultaneous communications over both nanomachine‐to‐relay relay‐to‐nanomachine channels. As a result use channel, each communication channel is allowed longer symbol intervals. This, turn, results drastically reduced intersymbol...
This paper is on simultaneous exploration and topological map building in completely unknown environments. We propose an approach that consists of a continuous loop local decision-making (where potential search directions are added to the current node) global robot moves along one these adds possibly new node ) using previously proposed bubble space representation. As switches between two continual manner, it creates coarse graph representation environment. There for every explored location...
Statistical associations of numerous single nucleotide polymorphisms with breast cancer (BC) have been identified in genome-wide association studies (GWAS). Recent evidence suggests that a Polygenic Risk Score (PRS) can be useful risk stratification instrument for BC screening strategy, and PRS test has developed clinical use. The performance the is yet unknown Norwegian population.To evaluate models dataset.We investigated sample 1053 cases 7094 controls from different regions Norway....
This paper presents three two-way molecular communication schemes. For via diffusion (MCvD) channels, several inter symbol interference (ISI) mitigation and modulation techniques are proposed in the literature for one way channels. An obvious generalization to communications is double molecule types which increases overall complexity. Furthermore, self (SI) another problem when transmission reception done with same type of molecules. In this paper, novel methods over MCvD channel that...
In this paper, a transfer function that models Molecular Communication via Diffusion (MCvD) between point transmitter and fully absorbing circular receiver in an unbounded 2-D environment is analytically derived. The analytical derivation of the channel MCvD proposed for first time literature. obtained by solving molecule concentration equations around considering diffusion dynamics, using some initial boundary conditions, reasonable assumptions. Analytical results are compared with Monte...
In molecular communication systems operating in a crowded biochemical environment, there is the potential for unintended chemical or physical interactions with external systems. order to avoid these interactions, ensure coexistence, it necessary tailor signaling scheme. this paper, we propose strategy exploiting reactions between different transmitted species. While intuitively appealing, non-linear nature of governing partial differential equations (PDE) means that selecting minimize...
A basic problem in molecular biology is to estimate equilibrium states of biochemical processes. To this end, advanced spectroscopy methods have been developed order chemical concentrations situ or vivo. However, such can require special conditions that do not allow direct observation the process. natural means resolving transmit signals another location within a lab-on-a-chip device; is, employing communication perform different location. In paper, we develop signaling strategy and...
Abstract While genome-wide association studies (GWAS) are increasingly successful in discovering genomic loci associated with complex human traits and disorders, the biological interpretation of these findings remains challenging. We developed GSA-MiXeR analytical tool for gene-set analysis (GSA), which fits a model heritability enrichments traits, accounting linkage disequilibrium across variants, allowing quantification partitioned fold enrichment small gene-sets. validate method using...
This paper presents a novel approach to local terrain mapping with topological maps. In particular, we use bubble space representation which has been previously proposed for representing nodes in We show that surfaces are constructed using three-dimensional laser data easily associated slope maps define and its proximity each different pan direction. Thus, instead of constructing global map priori, is estimated on-demand real-time as the robot navigates new place constructs surface. present...