Kim Labuschagne

ORCID: 0000-0003-2784-4767
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About
Contact & Profiles
Research Areas
  • Genetic diversity and population structure
  • Wildlife Ecology and Conservation
  • Identification and Quantification in Food
  • Genomics and Phylogenetic Studies
  • Genetic and phenotypic traits in livestock
  • Genetics, Bioinformatics, and Biomedical Research
  • Chromosomal and Genetic Variations
  • Viral Infections and Vectors
  • Biotechnology and Related Fields
  • Reproductive Physiology in Livestock
  • Environmental DNA in Biodiversity Studies
  • Animal Disease Management and Epidemiology
  • Vector-Borne Animal Diseases
  • Fish Biology and Ecology Studies
  • Prenatal Screening and Diagnostics
  • Genomic variations and chromosomal abnormalities
  • Avian ecology and behavior
  • Bacteriophages and microbial interactions
  • Advanced biosensing and bioanalysis techniques
  • Animal Behavior and Welfare Studies
  • Vector-borne infectious diseases
  • Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
  • Bioeconomy and Sustainability Development
  • Genetic Mapping and Diversity in Plants and Animals
  • Biomedical and Engineering Education

South African National Biodiversity Institute
2019-2024

National Zoological Gardens of South Africa
2016-2020

National Biodiversity Institute
2019

Abstract Background Penguins (Sphenisciformes) are a remarkable order of flightless wing-propelled diving seabirds distributed widely across the southern hemisphere. They share volant common ancestor with Procellariiformes close to Cretaceous-Paleogene boundary (66 million years ago) and subsequently lost ability fly but enhanced their capabilities. With ∼20 species among 6 genera, penguins range from tropical Galápagos Islands oceanic temperate forests New Zealand, rocky coastlines...

10.1093/gigascience/giz117 article EN cc-by GigaScience 2019-09-01

The white-bellied pangolin (Phataginus tricuspis) is the world's most trafficked mammal and at risk of extinction. Reducing illegal wildlife trade requires an understanding its origins. Using a genomic approach for tracing confiscations analyzing 111 samples collected from known geographic localities in Africa 643 seized scales Asia between 2012 2018, we found that poaching pressures shifted over time West to Central Africa. Recently, Cameroon's southern border has emerged as site intense...

10.1126/science.adi5066 article EN Science 2023-12-14
Ichrak Hayah Victor Ezebuiro Samuel Paul Kagame Josiah Kuja Cecilia Waruhiu and 95 more Lucky T. Nesengani Sinebongo Mdyogolo Annelin Molotsi Priscilla Abechi Asmaa M. Abushady Nabil Amor Brian Andika Abdelhamid Barakat Girish Beedessee Marietjie Botes Xavier David Nzube Ebuzoeme Zewdu Edea Achraf El Allali Owanate Pearl Elekima Assem K. El-Sherif Semir Bechir Suheil Gaouar Yohannes Gebre Owunari Abraham Georgewill Lydia Hadjeras M. A. Hassan Mohamed Hijri Isidore Houaga Justin E. Ideozu Matthias Igoh Mary Paschal Iwundu Sawal Hamid Md Ali Atef Jaouani Ahmed Marwane Kermouni Serradj Radjaa Khedim Mariëtte Kilian Dennis Manthi Kivuva Mehdi Knidiri Komi Komi Koukoura Eleojo Roseline Kwasi Kim Labuschagne Antoine Lusala Mafwila Isabel Mensah Uzoma Modebelu Prudent Mokgokong Morad M. Mokhtar Sadik Muzemil Helen Nigussie Valentine Otang Ntui Joel Ogwang Nicholas A. Olivier Olanrewaju Olufowobi Taiwo Crossby Omotoriogun Onikepe Folarin Jeremiah Orina Tanya Parish Peter Morales Jacques Potgieter Fouzia Radouani Madeleine Ramantswana Shaimaa R Reda Samson Pandam Salifu Schraga Schwartz Ntji Shabangu Abdoallah Sharaf IM Siminialayi Rae Marvin Smith Hiroaki Taniguchi Preye Maureen Tari-Ukuta Kassahun Tesfaye Fatimzohra Tmimi Libert Brice Tonfack Ogbuagu Ugorji Udensi Victoria Wavinya Wambua Sammy Wambua Kennedy Were Tim Wood Bret Mark Wurdeman Yedomon Ange Bovys Zoclanclounon Andrews Frimpong Adu Sotonye Leslie Gillis-Harry Nicholas Kwasi-Do Ohene Opoku Thendo Stanley Tshilate Semiha Dede S. O. Minimah Yves H. Tchiechoua Andreas Gisel Chadlia Hamdi Tshepo Mafokwane B.A. Odogwu Gift Nwachukwu Zahra Mungloo-Dilmohamud Faten Ghodhbane‐Gtari Chinagorom Ibeachu Renate Dorothea Zipfel Wenceslaus C. Madu Johnpaul Chukwudi Okorocha Tracy Masebe Kilsi Borgbara Kristien Nel van Zyl

The African BioGenome Project (AfricaBP) is a Pan-African initiative aimed at improving food systems and biodiversity conservation through genomics while ensuring equitable data sharing benefits. Open Institute the knowledge exchange platform of AfricaBP which aims to bridge local gaps in bioinformatics enable infrastructural developments. In 2024, advanced this mission by organising 31 workshops that attracted more than 3500 registered attendees trained 380 researchers genomics,...

10.31219/osf.io/dhcxp preprint EN 2025-01-16

The anthropogenic impact on wildlife is ever increasing. With shrinking habitats, wild populations are being pushed to co-exist in proximity humans leading an increased threat of infectious diseases. Therefore, understanding the immune system a species key assess its resilience changing environment. innate (IIS) body's first line defense against pathogens. High variability IIS genes, like toll-like receptor (TLR) appears be associated with resistance However, few studies have investigated...

10.1038/s41598-024-54076-y article EN cc-by Scientific Reports 2024-02-14

Combating wildlife crimes in South Africa requires accurate identification of traded species and their products. Diagnostic morphological characteristics needed to identify are often lost when specimens processed customs officials lack the expertise species. As a potential solution, DNA barcoding can be used morphologically indistinguishable forensic cases. However, is hindered by reliance on comprehensive, validated barcode reference databases, which currently limited. To overcome this...

10.1139/gen-2023-0050 article EN Genome 2024-07-12

Genets (Genetta) are a genus of African mammalian carnivorans with 14 currently recognized species, although taxonomic uncertainties remain, particularly regarding the number species within large-spotted genet complex. This study presents first banded karyotype and molecular cytogenetic analysis genetically identified panther genet, Genetta maculata, most common widespread taxon complex, wide distribution in sub-Saharan Africa. Sampled Gauteng Province, South Africa, it could be assigned to...

10.1159/000450627 article EN Cytogenetic and Genome Research 2016-01-01

The Woodland Kingfisher Halcyon senegalensis is widely distributed throughout sub-Saharan Africa and occupies a wide variety of woodland savannah habitat. Thus far, three subspecies have been described based on morphological variation. In the present study, using western, eastern southern African populations, we examined relationship between genetic divergence among two named subspecies, H. s. cyanoleuca senegalensis, mitochondrial markers (CO1, Cytb, 16S) nuclear (FIB5 RAG1). Southern birds...

10.2989/00306525.2022.2066215 article EN Ostrich 2022-07-20
Abdoallah Sharaf Lucky T. Nesengani Ichrak Hayah Josiah Kuja Sinebongo Mdyogolo and 95 more Taiwo Crossby Omotoriogun B.A. Odogwu Girish Beedessee Rae Marvin Smith Abdelhamid Barakat Acclaim M. Moila Adil El Hamouchi Alia Benkahla Amal Boukteb Amine Elmouhtadi Antoine Lusala Mafwila Asmaa M. Abushady Assem K. El-Sherif Bulbul Ahmed Charles Wairuri Charlotte Ndiribe Chukwuike Ebuzome Craig Kinnear Deborah-Fay Ndlovu Driss Iraqi Elmostafa El Fahime Ermias Assefa Faïssal Ouardi Fatima Zohra Belharfi Fatimzohra Tmimi F Markey Fouzia Radouani Francis Zeukeng Georges Lelo Mvumbi Hamilton Ganesan Mariem Hanachi Helen Negussie Hicham Charoute Ichrak Benamri Ikram Mkedder Imane Haddadi Issam Meftah Kadmiri Jackson Franco Mubiru Jean-Baka Kodjo Domelevo Entfellner Joan Bayowa Rokani Joel Ogwang Jude Bigoga Daiga Judy Omumbo Justin E. Ideozu Khaoula Errafii‬ Kim Labuschagne Komi Koukoura Komi Libert Brice Tonfack Lydia Hadjeras Madeleine Ramantswana Mamohale E. Chaisi Marietjie Botes Mariëtte Kilian Marija Kvas Marouane Melloul Melek Chaouch Meriem Khyatti Michael Abdo Mmatshepho Phasha- Muchemenye Mohamed Hijri Mohammed Rida Mediouni M. A. Hassan Mohammed Piro Monica Mwale Mossaab Maaloum Mudzuli Mavhunga Nicholas A. Olivier Oumaima Aminou Oumayma Arbani Oussema Souiai Pierre François Djocgoue Rachid Mentag Renate Dorothea Zipfel Rolland Bantar Tata Rosette Megnekou Sadik Muzemil Sadye Paez Samson Pandam Salifu Samuel Paul Kagame Sarra Selka Sean Edwards Semir Bechir Suheil Gaouar Shaimaa R Reda Siham Fellahi Slimane Khayi Soumia Ayed M. Thabang Madisha Tulsi Sahil Ogbuagu Ugorji Udensi Verena Ras Victor Ezebuiro C. Vincent Xavier David Yonas Geberemichael Yves H. Tchiechoua

In 2022, around 54 % of African students were denied student visas to study in the United States (US), compared 36 Asian and 9 European students, despite immigrants US often being more highly educated than native-born population. This issue cannot be attributed solely dichotomy between Global North South visa regimes, but it is also evident among nations across regional economic blocs. The BioGenome Project (AfricaBP) Open Institute for Genomics Bioinformatics, which aims overcome barriers...

10.31219/osf.io/c92rk preprint EN 2024-01-25

Hybridization in antelope species has been widely reported South African national parks and provincial reserves as well on private land due to anthropogenic effects. In a closed management setting, hybridization may occur the crossbreeding of closely related with unequal sex ratios, resulting either sterile or fertile offspring. this study, we used molecular techniques evaluate risk between blesbok (

10.1002/ece3.11194 article EN cc-by Ecology and Evolution 2024-04-01

Abstract Gonadal hormones play a central role in reproductive function and success. As such, quantifying non-invasively threatened, vulnerable endangered wildlife species offers an ideal tool for assessing general individual patterns situ. Whilst the use of faeces as hormone matrix is often preferred these cases, required enzyme immunoassays (EIAs) measuring faecal androgen (fAM), oestrogen (fEM) progestagen metabolite (fPM) concentrations must first be validated if gets investigated time to...

10.1093/conphys/coae079 article EN cc-by Conservation Physiology 2024-01-01

The Diederik Cuckoo Chrysococcyx caprius is an African species widely distributed south of the Sahara, which migrates seasonally between breeding and nonbreeding sites. It currently unknown whether consists a single panmictic population or if it genetically structured. To investigate this, we analysed sequence variation in three mitochondrial two nuclear gene regions combination with morphological measurements specimens from four localities. Phylogenetic relationships were estimated using...

10.2989/00306525.2023.2222230 article EN Ostrich 2023-04-03
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