A5063654057- Research in Cotton Cultivation
- Plant Molecular Biology Research
- Plant Virus Research Studies
- Plant Gene Expression Analysis
- Plant Stress Responses and Tolerance
- Identification and Quantification in Food
- Photosynthetic Processes and Mechanisms
- Phytoplasmas and Hemiptera pathogens
- Protein Hydrolysis and Bioactive Peptides
- Rice Cultivation and Yield Improvement
- Antimicrobial Peptides and Activities
- Plant tissue culture and regeneration
- Plant Parasitism and Resistance
- Plant nutrient uptake and metabolism
- Plant Reproductive Biology
- Hepatocellular Carcinoma Treatment and Prognosis
- Cocoa and Sweet Potato Agronomy
- Crop Yield and Soil Fertility
- Plant and Fungal Interactions Research
- Wildlife Ecology and Conservation
- Machine Learning in Bioinformatics
- Glycosylation and Glycoproteins Research
- Plant pathogens and resistance mechanisms
- Bioinformatics and Genomic Networks
- Protease and Inhibitor Mechanisms
Zhejiang A & F University
2022-2025
Shandong Institute for Product Quality Inspection
2022-2025
Xinjiang Agricultural University
2021-2024
Xinjiang Academy of Agricultural and Reclamation Science
2023-2024
Cotton Research Institute
2023-2024
Xinjiang Academy of Agricultural Sciences
2024
Xinjiang Production and Construction Corps
2024
Shandong Institute of Food and Drug Inspection
2023
Fujian Agriculture and Forestry University
2019
Broad Institute
2019
Chalcone synthase (CHS), the first key structural enzyme in flavonoid biosynthesis pathway, plays a crucial role regulating plant responses to abiotic stresses and hormone signaling. However, its molecular functions remain largely unknown Phyllostachys edulis, which is one of most economically ecologically important bamboo species widely distributed China. This study identified 17 CHS genes edulis classified them into seven subgroups, showing closer evolutionary relationship from rice....
Trehalose-6-phosphate phosphatases (TPPs), which are encoded by members of the TPP gene family, can improve drought tolerance plants. However, molecular mechanisms underlying dynamic regulation genes during stress remain unclear. In this study, we explored function an Arabidopsis conducting comparative analyses a loss-of-function mutant and overexpression lines.The mutation thaliana TPPF, member resulted in drought-sensitive phenotype, while line overexpressing TPPF showed significantly...
The K + uptake permease/high-affinity /K transporter (KUP/HAK/KT) family is the most prominent group of potassium (K ) transporters, playing a key role in uptake, transport, plant growth and development, stress tolerance. However, presence functions KUP/HAK/KT Moso bamboo ( Phyllostachys edulis (Carriere) J. Houzeau), fastest-growing plant, have not been studied. In this study, we identified 41 genes PeHAKs distributed across 18 chromosomal scaffolds genome. PeHAK typical membrane protein...
Abstract Background KNOTTED1 -like homeobox ( KNOX ) genes, plant-specific homologous box transcription factors (TFs), play a central role in regulating plant growth, development, organ formation, and response to biotic abiotic stresses. However, comprehensive genome-wide identification of the genes Moso bamboo Phyllostachys edulis ), fastest growing plant, has not yet been conducted, specific biological functions this family remain unknown. Results The expression profiles 24 divided into...
Abstract Background Domain of unknown function 668 (DUF668) may play a crucial role in the plant growth and developmental response to adverse stress. However, our knowledge DUF668 gene family is limited. Results Our study was conducted based on identified from cotton genome sequencing. Phylogenetic analysis showed that genes can be classified into four subgroups cotton. We 32 genes, which are distributed 17 chromosomes most them located nucleus Gossypium hirsutum. Gene structure motif...
DVL is one of the small polypeptides which plays an important role in regulating plant growth and development, tissue differentiation, organ formation process coping with stress conditions. So far, there has been no comprehensive analysis expression profile function cotton gene. According to previous studies, a candidate gene related development fuzz was screened, belonging family, trichomes Arabidopsis thaliana. However, identification systematic have not conducted. In this study, we...
Cysteine-rich polycomb-like proteins (CPPs), pivotal transcription factors crucial for evolution of plants from germination to maturity, and adaptation environmental stresses, have not yet been characterized within the context Moso bamboo. The CPP gene family bamboo was identified through bioinformatics, structural functional attributes gene, including its physicochemical properties, evolutionary relationships, gene-protein structures, were revealed. Additionally, current study also offers...
Dirigent (DIR) proteins are key regulators of lignin and lignan biosynthesis play critical roles in plant hormone responses, abiotic stress tolerance, growth development. This study identified characterized 47 PeDIR genes Moso bamboo, classifying them into three groups. Phylogenetic comparative analyses revealed strong evolutionary conservation, with the bamboo being most closely related to those rice maize. DIR within each subfamily exhibited high conservation motif composition, domain...
Moso bamboo (Phyllostachys heterocycla (Carriere) Matsum.), a member of the subfamily within Gramineae family, is globally significant economic forest resource, notable for its swift growth. JAZ proteins, crucial in jasmonic acid signaling pathway, play essential roles plant growth, development, and responses to various biotic abiotic stresses. This study identifies 22 genes moso using bioinformatics. We conducted comprehensive analysis their physicochemical properties, gene structure,...
Fuzzless Gossypium hirsutum mutants are ideal materials for investigating cotton fiber initiation and development. In this study, we used the fuzzless G. mutant Xinluzao 50 FLM as research material combined it with other verification by RNA sequencing to explore gene expression patterns differences between genes in upland during fuzz period. A ontology (GO) enrichment analysis showed that differentially expressed (DEGs) were mainly enriched metabolic process, microtubule binding, pathways....
Jacalin-related lectins (JRLs) are a new subfamily of plant that has recently been recognized and plays an important role in growth, development, abiotic stress response. Although moso bamboo (Phyllostachys edulis) is economically industrially worldwide, there no systematic identification JRLs this species. Here, we identified 25 JRL genes bamboo, these unequally distributed among 10 genome scaffolds. Phylogenetic analysis showed the were clustered into four subgroups: I, II, V, VII....
Chromatin remodelers are essential for regulating plant growth, development, and responses to environmental stresses. HIT4 (HEAT-INTOLERANT 4) is a novel stress-induced chromatin remodeling factor that has been less studied in abiotic stress resistance, particularly cotton. In this study, we conducted comprehensive analysis of the members gene family Gossypium hirsutum using bioinformatics methods, including phylogenetic relationships, organization, transcription profiles, connections,...
Fiber length is an important indicator of cotton fiber quality, and the time rate cell elongation are key factors in determining mature cotton. To gain insight into differences mechanisms offspring backcross populations Sea Island Xinhai 16 land Line 9, we selected two groups with significant (long-fiber group L short-fiber S) at different development stages 0, 5, 10 15 days post-anthesis (DPA) for transcriptome comparison. A total 171.74 Gb clean data was obtained by RNA-seq, eight genes...
Deer antler is a globally widely used precious natural medicine and the material of deer horn gelatin. However, identification species based on traditional approaches are problematic because their similarity in appearance physical-chemical properties. In this study, we performed comprehensive peptidome analysis using label-free approach: nano LC-Orbitrap MS was applied to discover peptide biomarkers adult beta-globin (HBBA), HPLC-Triple Quadrupole verify specificity. Nineteen were found,...
Sulfotransferases (SOTs) (EC 2.8.2.-) are sulfate regulatory proteins in a variety of organisms that have been previously shown to be involved regulating physiological and biological processes, such as growth, development, adaptation land, stomatal closure, drought tolerance, response pathogen infection. However, there is lack comprehensive identification systematic analysis SOT cotton, especially G. barbadense. In this study, we used bioinformatics methods analyze the structural...
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is the central enzyme of glycolysis and plays important regulatory roles in plant growth development responses to adverse stress conditions. However, studies on characteristics functions cotton GAPDH family genes are still lacking.In this study, genome-wide identification gene was performed, phylogeny, structures, promoter progenitors expression profiles upland members were explored by bioinformatics analysis highlight potential functions. The...
Impaired expansion of peripheral fat contributes to the pathogenesis insulin resistance and Type 2 Diabetes (T2D). We aimed identify novel disease-gene interactions during adipocyte differentiation.Genes in disease-associated loci for T2D, adiposity were ranked according expression human adipocytes. The top 125 genes ablated pre-adipocytes via CRISPR/CAS9 resulting cellular phenotypes quantified differentiation with high-content microscopy automated image analysis. Morphometric measurements...
Abstract Background Focusing on key indicators of drought resistance is highly important for quickly mining candidate genes related to in cotton. Results In the present study, was identified resistance-related RIL populations during flowering and boll stages, multiple traits were evaluated; these included three indicators: plant height (PH), single weight (SBW) transpiration rate (Tr). Based indicators, groups extreme mixing pools constructed BSA-seq. mapping interval each trait, a total...
The GT64 subfamily, belonging to the glycosyltransferase family, plays a critical function in plant adaptation stress conditions and modulation of growth, development, organogenesis processes. However, comprehensive identification systematic analysis cotton are still lacking.
Background PIN proteins are an important class of auxin polar transport that play regulatory role in plant growth and development. However, their characteristics functions have not been identified Gossypium barbadense . Methods family genes were the cotton species G. , hirsutum raimondii arboreum detailed bioinformatics analyses conducted to explore roles these using transcriptome data quantitative reverse-transcription polymerase chain reaction (qRT-PCR) technology. Functional verification...
Abstract Background The GT64 subfamily, belonging to the glycosyltransferase enzyme family, plays a critical function in plant adaptation stress conditions and modulation of growth, development, organogenesis processes. However, comprehensive identification systematic analysis cotton are still lacking. Results This study used bioinformatics techniques conduct detailed investigation on gene family members eight species for first time. A total 39 genes were detected, which could be classified...