Clément M. Garin

ORCID: 0000-0003-0712-7330
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About
Contact & Profiles
Research Areas
  • Functional Brain Connectivity Studies
  • Neural dynamics and brain function
  • Advanced Neuroimaging Techniques and Applications
  • Advanced MRI Techniques and Applications
  • Memory and Neural Mechanisms
  • Neuroscience and Neuropharmacology Research
  • Adipose Tissue and Metabolism
  • Primate Behavior and Ecology
  • Metabolomics and Mass Spectrometry Studies
  • Medical Imaging Techniques and Applications
  • Gene expression and cancer classification
  • Photoreceptor and optogenetics research
  • Fractal and DNA sequence analysis
  • RNA Research and Splicing
  • Alzheimer's disease research and treatments
  • Mental Health Research Topics
  • Morphological variations and asymmetry
  • Lanthanide and Transition Metal Complexes
  • Bat Biology and Ecology Studies
  • Prion Diseases and Protein Misfolding
  • Gastrointestinal Tumor Research and Treatment
  • Diet and metabolism studies
  • Neuroinflammation and Neurodegeneration Mechanisms
  • Evolution and Paleontology Studies
  • Neuroscience and Neural Engineering

Vanderbilt University
2022-2025

Centre National de la Recherche Scientifique
2017-2024

Commissariat à l'Énergie Atomique et aux Énergies Alternatives
2017-2024

CEA Paris-Saclay - Etablissement de Fontenay-aux-roses
2017-2024

Institut des Sciences Cognitives
2024

Université Paris-Sud
2017-2023

CEA Paris-Saclay
2020-2023

Université Paris-Saclay
2017-2023

Direction de la Recherche Fondamentale
2018-2023

Wake Forest University
2021-2022

Preclinical applications of resting-state functional magnetic resonance imaging (rsfMRI) offer the possibility to non-invasively probe whole-brain network dynamics and investigate determinants altered signatures observed in human studies. Mouse rsfMRI has been increasingly adopted by numerous laboratories worldwide. Here we describe a multi-centre comparison 17 mouse datasets via common image processing analysis pipeline. Despite prominent cross-laboratory differences equipment procedures,...

10.1016/j.neuroimage.2019.116278 article EN cc-by-nc-nd NeuroImage 2019-10-12
Joanes Grandjean Gabriel Desrosiers-Grégoire Cynthia Anckaerts Diego Ángeles-Valdéz Fadi Ayad and 95 more David André Barrière Ines Blockx Aleksandra Bortel Margaret Broadwater Beatriz M Cardoso Marina Célestine Jorge E. Chavez-Negrete Sangcheon Choi Emma Christiaen Perrin Clavijo Luis M. Colon‐Perez Samuel Cramer Tolomeo Daniele Elaine Dempsey Yujian Diao Arno Doelemeyer David Dopfel Lenka Dvořáková Claudia Falfan‐Melgoza Francisca F. Fernandes Caitlin Fowler Antonio Fuentes-Ibañez Clément M. Garin Eveline Gelderman Carla E. M. Golden Chao Guo Marloes J. A. G. Henckens Lauren A. Hennessy Péter Hermán Nita Hofwijks Corey Horien Tudor M. Ionescu Jolyon A. Jones Johannes Kaesser Eugene Kim Henriette Lambers Alberto Lazari Sung-Ho Lee Amanda Lillywhite Yikang Liu Yanyan Y. Liu Alejandra López-Castro Xavier López-Gil Zilu Ma Eilidh MacNicol Dan Madularu Francesca Mandino Sabina Marciano Matthew J. McAuslan Patrick McCunn Alison McIntosh Xianzong Meng Lisa Meyer-Baese Stephan Missault Federico Moro Daphne M. P. Naessens Laura Nava-Gómez Hiroi Nonaka Juan José Ortiz Jaakko Paasonen Lore M. Peeters Mickaël Pereira Pablo D. Pérez Marjory Pompilus M. J. W. Prior Rustam Rakhmatullin Henning M. Reimann Jonathan Reinwald Rodrigo Triana Del Rio Alejandro Rivera-Olvera Daniel Ruiz-Pérez Gabriele Russo Tobias J. Rutten Rie Ryoke Markus Sack Piergiorgio Salvan Basavaraju G. Sanganahalli Aileen Schroeter Bhedita J. Seewoo Erwan Selingue Aline Seuwen Bowen Shi Nikoloz Sirmpilatze Joanna A. B. Smith Corrie Smith Filip Sobczak Petteri Stenroos Milou Straathof Sandra Strobelt Akira Sumiyoshi Kengo Takahashi María Evelina Torres García Raúl Tudela Monica van den Berg Kajo van der Marel

10.1038/s41593-023-01286-8 article EN Nature Neuroscience 2023-03-27

The human default mode network (DMN) is engaged at rest and in cognitive states such as self-directed thoughts. Interconnected homologous cortical areas primates constitute a considered the equivalent. Here, based on cross-species comparison of DMN between humans non-hominoid (macaques, marmosets, mouse lemurs), we report major dissimilarities connectivity profiles. Most importantly, medial prefrontal cortex (mPFC) poorly with posterior cingulate (PCC), though strong correlated activity PCC...

10.1016/j.celrep.2022.110669 article EN cc-by-nc-nd Cell Reports 2022-04-01

Whether the size of prefrontal cortex (PFC) in humans is disproportionate when compared to other species a persistent debate evolutionary neuroscience. This question has left study over/under-expansion structures relatively unexplored. We therefore sought address this gap by adapting anatomical areas from digital atlases 18 mammalian species, create common interspecies classification. Our approach used data-driven analysis based on phylogenetic generalized least squares evaluate expansion...

10.1073/pnas.2202491119 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2022-06-14

Brain aging contributes to cognitive decline and risk of dementia. Degeneration the basal forebrain cholinergic system parallels these changes in aging, Alzheimer's dementia, Parkinson's Lewy body thus is a common element linked executive function across lifespan disease states. Here, we tested potential one-hour daily intermittent stimulation improve cognition senescent Rhesus monkeys, its mechanisms action. Stimulation five animals improved working memory duration each animal over 8-12...

10.1016/j.brs.2025.02.002 article EN cc-by-nc Brain stimulation 2025-02-07

Gadolinium (Gd)-stained MRI is based on Gd contrast agent (CA) administration into the brain parenchyma. The strong signal increase induced by CA can be converted resolution enhancement to record microscopic MR images. Moreover, inhomogeneous distribution of in improves between different tissues and provides new contrasts Gd-stained detects amyloid plaques, one lesions Alzheimer's disease (AD), APPSL/PS1M146L mice or primates. Numerous transgenic with various plaque typologies have been...

10.1038/s41598-017-05285-1 article EN cc-by Scientific Reports 2017-07-04

Small-mammal neuroimaging offers incredible opportunities to investigate structural and functional aspects of the brain. Many tools have been developed in last decade analyse small animal data, but current softwares are less mature than available that process human brain data. The Python package Sammba-MRI (SmAll-MaMmal BrAin MRI Python; http://sammba-mri.github.io) allows flexible efficient use existing methods enables fluent scriptable analysis workflows, from raw data conversion...

10.3389/fninf.2020.00024 article EN cc-by Frontiers in Neuroinformatics 2020-05-28
Samuel Alldritt J.S.B. Ramirez Reinder Vos de Wael Richard A.I. Bethlehem Jakob Seidlitz and 95 more Z. Wang Karl‐Heinz Nenning Nathália Bianchini Esper Jonny Smallwood Alexandre R. Franco Kyoungseob Byeon Aaron Alexander‐Bloch David G. Amaral Céline Amiez Fabien Balezeau Mark G. Baxter Guillaume Becker Jeffrey Bennett Olivia Berkner Erwin L. A. Blezer Ansgar M. Brambrink Thomas Brochier Beth Butler L.J. Campos Emmanuelle Canet‐Soulas Lucie Chalet Ang Chen Justine Cléry Christos Constantinidis Douglas J. Cook Stanislas Dehaene Lena Dorfschmidt Carly M. Drzewiecki John W. Erdman Stefan Everling Arnaud Falchier Lazar Fleysher Andrew J. Fox Winrich A. Freiwald Mathilda Froesel Seán Froudist‐Walsh Judy Fudge Thomas Funck Maëva Gacoin Daniel J. Gale Joanne Gallivan Clément M. Garin Timothy D. Griffiths Carole Guedj Fadila Hadj‐Bouziane Suliann Ben Hamed Noam Harel Roland Hartig Bassem Hiba B.R. Howell Béchir Jarraya Benjamin Jung Ned H. Kalin J. Karpf Sabine Kästner P. Christiaan Klink Zsofia A. Kovacs-Balint Christopher D. Kroenke Matthew J. Kuchan Sze Chai Kwok Kevin N. Laland David A. Leopold Gang Li Patrik Lindenfors Gary Linn Rogier B. Mars Kurt Masiello Ravi S. Menon Adam Messinger Martine Meunier Kin Y. Mok John H. Morrison Jennifer Nacef Júlia Nagy Viola Neudecker Martha Neuringer MaryAnn P. Noonan Michael Ortiz-Rios Jose F. Perez‐Zoghbi Christopher I. Petkov Mark A. Pinsk Colline Poirier Emmanuel Procyk Reza Rajimehr Simon M. Reader David A. Rudko Matthew F. S. Rushworth Brendan E. Russ Jérôme Sallet Mar M. Sánchez MC Schmid Caspar M. Schwiedrzik Jonathan Scott Julien Sein KK Sharma

Recent efforts to chart human brain growth across the lifespan using large-scale MRI data have provided reference standards for development. However, similar models nonhuman primate (NHP) are lacking. The rhesus macaque, a widely used NHP in translational neuroscience due its similarities anatomy, phylogenetics, cognitive, and social behaviors humans, serves as an ideal model. This study aimed create normative charts structure macaque lifespan, enhancing our understanding of neurodevelopment...

10.1101/2024.08.28.610193 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-08-30

Measures of resting-state functional connectivity allow the description neuronal networks in humans and provide a window on brain function normal pathological conditions. Characterizing animals is complementary to studies understand how evolution has modelled network architecture. The mouse lemur (Microcebus murinus) one smallest more phylogenetically distant primates as compared humans. organization its critical for scientists studying this primate well add link comparative animal studies....

10.1016/j.neuroimage.2020.117589 article EN cc-by NeuroImage 2020-11-26

Abstract Preclinical applications of resting-state functional magnetic resonance imaging (rsfMRI) offer the possibility to non-invasively probe whole-brain network dynamics and investigate determinants altered signatures observed in human studies. Mouse rsfMRI has been increasingly adopted by numerous laboratories world-wide. Here we describe a multi-centre comparison 17 mouse datasets via common image processing analysis pipeline. Despite prominent cross-laboratory differences equipment...

10.1101/541060 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2019-02-08
Joanes Grandjean Gabriel Desrosiers-Grégoire Cynthia Anckaerts Diego Ángeles-Valdéz Fadi Ayad and 95 more David André Barrière Ines Blockx Aleksandra Bortel Margaret Broadwater Beatriz M Cardoso Marina Célestine Jorge E. Chavez-Negrete Sangcheon Choi Emma Christiaen Perrin Clavijo Luis M. Colon‐Perez Samuel Cramer Daniele Tolomeo Elaine Dempsey Yujian Diao Arno Doelemeyer David Dopfel Lenka Dvořáková Claudia Falfan‐Melgoza Francisca F. Fernandes Caitlin Fowler Antonio Fuentes-Ibañez Clément M. Garin Eveline Gelderman Carla E. M. Golden Chao Guo Marloes J. A. G. Henckens Lauren A. Hennessy Péter Hermán Nita Hofwijks Corey Horien Tudor M. Ionescu Jolyon A. Jones Johannes Kaesser Eugene Kim Henriette Lambers Alberto Lazari Sung‐Ho Lee Amanda Lillywhite Yikang Liu Yanyan Y. Liu Alejandra López-Castro Xavier López-Gil Zilu Ma Eilidh MacNicol Dan Madularu Francesca Mandino Sabina Marciano Matthew J. McAuslan Patrick McCunn Alison McIntosh Xianzong Meng Lisa Meyer-Baese Stephan Missault Federico Moro Daphne M. P. Naessens Laura Nava-Gómez Hiroi Nonaka Juan José Ortiz Jaakko Paasonen Lore M. Peeters Mickaël Pereira Pablo D. Pérez Marjory Pompilus M. J. W. Prior Rustam Rakhmatullin Henning M. Reimann Jonathan Reinwald Rodrigo Triana de Rio Alejandro Rivera-Olvera Daniel Ruiz-Pérez Gabriele Russo Tobias J. Rutten Rie Ryoke Markus Sack Piergiorgio Salvan Basavaraju G. Sanganahalli Aileen Schroeter Bhedita J. Seewoo Erwan Selingue Aline Seuwen Bowen Shi Nikoloz Sirmpilatze Joanna A. B. Smith Corrie Smith Filip Sobczak Petteri Stenroos Milou Straathof Sandra Strobelt Akira Sumiyoshi Kengo Takahashi María Evelina Torres García Raúl Tudela Monica van den Berg Kajo van der Marel

Abstract Task-free functional connectivity in animal models provides an experimental framework to examine phenomena under controlled conditions and allows comparison with invasive or terminal procedures. To date, acquisitions are performed varying protocols analyses that hamper result integration. We introduce StandardRat , a consensus rat MRI acquisition protocol tested across 20 centers. develop this optimized processing parameters, we initially aggregated 65 imaging datasets acquired rats...

10.1101/2022.04.27.489658 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2022-04-28

Glutamate is the amino acid with highest cerebral concentration. It plays a central role in brain metabolism. also principal excitatory neurotransmitter and involved multiple cognitive functions. Alterations of glutamatergic system may contribute to pathophysiology many neurological disorders. For example, changes glutamate availability are reported rodents humans during Alzheimer's Huntington's diseases, epilepsy as well aging. Most studies evaluating have used invasive or spectroscopy...

10.1016/j.neuroimage.2022.118984 article EN cc-by-nc-nd NeuroImage 2022-02-08

We present a dataset made of 3D digital brain templates and an atlas the gray mouse lemur (Microcebus murinus), small prosimian primate growing interest for studies biology evolution. A template image was constructed from in vivo magnetic resonance imaging (MRI) data 34 animals. This then manually segmented into 40 cortical, 74 subcortical 6 cerebro-spinal fluid (CSF) regions. Additionally, contains probability maps matter, white matter CSF. The template, manual segmentation can be...

10.1016/j.dib.2018.10.067 article EN cc-by Data in Brief 2018-10-25

Large-scale research integration is contingent on seamless access to data in standardized formats. Standards enable researchers understand external experiment structures, pool results, and apply homogeneous preprocessing analysis workflows. Particularly, they facilitate these features without the need for numerous potentially confounding compatibility add-ons. In small animal magnetic resonance imaging, an overwhelming proportion of acquired via ParaVision software Bruker Corporation. The...

10.3389/fninf.2020.00005 article EN cc-by Frontiers in Neuroinformatics 2020-02-11

Abstract In humans, iatrogenic transmission of cerebral amyloid-β (Aβ)-amyloidosis is suspected following inoculation pituitary-derived hormones or dural grafts presumably contaminated with Aβ proteins as well after surgeries. Experimentally, intracerebral brain homogenate extracts containing misfolded can seed deposition in transgenic mouse models amyloidosis non-human primates. The governed by the host and inoculated samples. It critical to better characterize propensities different hosts...

10.1186/s40478-020-01081-7 article EN cc-by Acta Neuropathologica Communications 2020-11-30

Les réseaux cérébraux au repos, visibles en IRM fonctionnelle, sont les reflets de l’activité intrinsèque du cerveau et donnent précieuses informations sur la fonction cérébrale saine pathologique. L’étude ces dans des modèles animaux pourrait, améliorant compréhension différences anatomiques fonctionnelles existant entre espèces mammifères, être à base d’avancées substantielles maladies neurologiques bases chez l’humain. Cependant, comparaison interspécifique est ardue car atlas cérébraux,...

10.3406/bavf.2024.71070 article FR Bulletin de l Académie vétérinaire de France 2024-01-01

Abstract Brain aging contributes to cognitive decline and risk of dementia. Degeneration the basal forebrain cholinergic system parallels these changes in aging, Alzheimer’s dementia, Parkinson’s Lewy body thus is a common element linked executive function across lifespan disease states. Here, we tested potential one-hour daily intermittent stimulation improve cognition senescent monkeys, its mechanisms action. Stimulation five animals improved working memory duration 8-12 weeks all animals,...

10.1101/2024.03.01.582925 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-03-06
Ting Xu Samuel Alldritt Julian S.B. Ramirez Reinder Vos de Wael Richard A.I. Bethlehem and 95 more Jakob Seidlitz Karl‐Heinz Nenning Jonathan Smallwood Zexi Wang Nathália Bianchini Esper Alexandre R. Franco Aaron Alexander‐Bloch David G. Amaral Céline Amiez Fabien Balezeau Mark G. Baxter Guillaume Becker Jeffrey Bennett Olivia Berkner Erwin L. A. Blezer Ansgar M. Brambrink Thomas Brochier Brent Butler Kyoungseob Byeon Lillian Campos Emmanuelle Canet‐Soulas Lucie Chalet Aihua Chen Justine Cléry Christos Constantinidis Douglas J. Cook Stanislas Dehaene Lena Dorfschmidt Carly M. Drzewiecki John W. Erdman Stefan Everling Arnaud Falchier Lazar Fleysher Andrew S. Fox Winrich A. Freiwald Mathilda Froesel Seán Froudist‐Walsh Julie L. Fudge Thomas Funck Maëva Gacoin Daniel J. Gale J. Randall Flanagan Clément M. Garin Timothy D. Griffiths Carole Guedj Fadila Hadj‐Bouziane Suliann Ben Hamed Noam Harel Renée Hartig Katja Heuer Bassem Hiba Brittany Howell Béchir Jarraya Benjamin Jung Ned H. Kalin Joshua Karpf Sabine Kästner P. Christiaan Klink Zsofia Kovacs‐Balint Christopher D. Kroenke Matthew J. Kuchan Sze Chai Kwok Kevin N. Laland David A. Leopold Gang Li Patrik Lindenfors Gary Linn Rogier B. Mars Kurt Masiello Ravi S. Menon Adam Messinger Martine Meunier Kelvin Mok John H. Morrison Jennifer Nacef Jamie Nagy Viola Neudecker Martha Neuringer MaryAnn P. Noonan Michael Ortiz-Rios Jose F. Perez‐Zoghbi Mark A. Pinsk Colline Poirier Emmanuel Procyk Reza Rajimehr Simon M. Reader David A. Rudko Matthew F. S. Rushworth Brian E. Russ Jérôme Sallet Mar M. Sánchez Michael C. Schmid Caspar M. Schwiedrzik Julia A. Scott Julien Sein

<title>Abstract</title> Recent efforts to chart human brain growth across the lifespan using large-scale MRI data have provided reference standards for development. However, similar models nonhuman primate (NHP) are lacking. The rhesus macaque, a widely used NHP in translational neuroscience due its similarities anatomy, phylogenetics, cognitive, and social behaviors humans, serves as an ideal model. This study aimed create normative charts structure macaque lifespan, enhancing our...

10.21203/rs.3.rs-5094199/v1 preprint EN cc-by Research Square (Research Square) 2024-10-21

Abstract Measures of resting-state functional connectivity allow the description neuronal networks in humans and provide a window on brain function normal pathological conditions. Animal models are critical to further address experimentally their roles pathologies. Here we describe for first time network organization mouse lemur ( Microcebus murinus ), small primate attracting increased attention as model neuroscience. Resting-state MR images were recorded at 11.7 Tesla. Forty-eight regions...

10.1101/599423 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2019-04-05
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