Jonathan Chang

ORCID: 0000-0003-2956-622X
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About
Contact & Profiles
Research Areas
  • Protease and Inhibitor Mechanisms
  • Cancer Cells and Metastasis
  • 3D Printing in Biomedical Research
  • Bone Metabolism and Diseases
  • Quinazolinone synthesis and applications
  • Computational Drug Discovery Methods
  • Malaria Research and Control
  • Cancer therapeutics and mechanisms
  • Natural product bioactivities and synthesis
  • Cancer Immunotherapy and Biomarkers
  • Phenothiazines and Benzothiazines Synthesis and Activities
  • HIV/AIDS drug development and treatment
  • Pharmacogenetics and Drug Metabolism
  • Bone health and treatments
  • Periodontal Regeneration and Treatments
  • Immune cells in cancer
  • Platelet Disorders and Treatments
  • Synthesis and biological activity
  • vaccines and immunoinformatics approaches
  • Neurogenesis and neuroplasticity mechanisms
  • Renal and related cancers
  • TGF-β signaling in diseases
  • Lipid metabolism and disorders
  • Biochemical and Structural Characterization
  • Advanced Glycation End Products research

Georgia Institute of Technology
2019-2025

The Wallace H. Coulter Department of Biomedical Engineering
2019-2025

Novartis (United States)
2011-2023

The Ohio State University
2017-2020

California State University, Northridge
2018

Dana-Farber Cancer Institute
2015

Genomics Institute of the Novartis Research Foundation
2006-2014

University of California, San Francisco
2013

Tufts Medical Center
2013

Tufts University
2013

The synthesis, preclinical profile, and in vivo efficacy rat xenograft models of the novel selective anaplastic lymphoma kinase inhibitor 15b (LDK378) are described. In this initial report, preliminary structure-activity relationships (SARs) described as well rational design strategy employed to overcome development deficiencies first generation ALK 4 (TAE684). Compound is currently phase 1 2 clinical trials with substantial antitumor activity being observed ALK-positive cancer patients.

10.1021/jm400402q article EN Journal of Medicinal Chemistry 2013-06-07

Abstract Despite the increasing interest in targeting stromal elements of tumor microenvironment, we still face tremendous challenges developing adequate therapeutics to modify landscape. A major obstacle this is our poor understanding phenotypic and functional heterogeneity cells tumors. Herein, perform an unbiased interrogation mesenchymal cells, delineating co-existence distinct subsets cancer-associated fibroblasts (CAFs) microenvironment murine carcinomas, each endowed with unique...

10.1038/s41467-020-19920-5 article EN cc-by Nature Communications 2020-12-09

The intracellular protein HMGB1 is released from cells and acts as a damage-associated molecular pattern molecule during many diseases, including inflammatory bowel disease (IBD); however, the function of inflammation poorly understood. Here, we demonstrated that cytosolic regulates apoptosis by protecting autophagy proteins beclin 1 ATG5 calpain-mediated cleavage inflammation. Colitis in mice with an intestinal epithelial cell–specific Hmgb1 deletion patients IBD were both characterized...

10.1172/jci76344 article EN Journal of Clinical Investigation 2015-02-02

Adult neurogenesis occurs in mammals and provides a mechanism for continuous neural plasticity the brain. However, little is known about molecular mechanisms regulating hippocampal progenitor cells (NPCs) whether their fate can be pharmacologically modulated to improve regeneration. Here, we report characterization of small molecule (KHS101) that selectively induces neuronal differentiation phenotype. Mechanism action studies revealed link KHS101 cell cycle exit specific binding TACC3...

10.1073/pnas.1010300107 article EN Proceedings of the National Academy of Sciences 2010-09-07

Starting from a hit series GNF compound library collection and based on cell-based proliferation assay of Plasmodium falciparum, novel imidazolopiperazine scaffold was optimized. SAR for this compounds is discussed, focusing optimization cellular potency against wild-type drug resistant parasites improvement physiochemical pharmacokinetic properties. The lead in showed good potencies vitro decent oral exposure levels vivo. In berghei mouse infection model, one lowered the parasitemia level...

10.1021/jm2003359 article EN publisher-specific-oa Journal of Medicinal Chemistry 2011-06-06

On the basis of initial success optimization a novel series imidazolopiperazines, second generation compounds involving changes in core piperazine ring was synthesized to improve antimalarial properties. These were carried out further potency and metabolic stability by leveraging outcome set vitro identification studies. The optimized 8,8-dimethyl imidazolopiperazine analogues exhibited improved potency, profile and, as result, enhanced oral exposure vivo mice. found be more efficacious than...

10.1021/jm300041e article EN publisher-specific-oa Journal of Medicinal Chemistry 2012-04-23

The extracellular matrix (ECM) is critical for mammary ductal development and differentiation, but how fibroblasts regulate ECM remodeling remains to be elucidated. Herein, we used a mouse genetic model activate platelet derived growth factor receptor-alpha (PDGFRα) specifically in the stroma. Hyperactivation of PDGFRα stroma severely hindered pubertal morphogenesis, did not interrupt lobuloalveolar differentiation program. Increased stromal signaling induced fat pad fibrosis with...

10.1016/j.neo.2017.04.004 article EN cc-by-nc-nd Neoplasia 2017-05-11

This manuscript describes a new method for forming basal-in MCF10A organoids using commercial 384-well ultra-low attachment (ULA) microplates and the development of associated live-cell imaging automated analysis protocols. The use ULA platform makes this more broadly accessible than previously reported hanging drop systems enables in-incubator imaging. Therefore, time points can be captured on frequent basis to improve tracking early organoid formation growth. However, one major challenge...

10.1038/s41598-021-03739-1 article EN cc-by Scientific Reports 2022-01-10

Here we report the design and evaluation of a bifunctional, small molecule switch that induces targeted immune response against tumors in vivo. A high affinity ligand for prostate specific membrane antigen (PSMA) was conjugated to hapten binds dinitrophenyl (DNP)-specific antibodies. When introduced into hu-PBL-NOD/SCID mice previously immunized with KLH-DNP immunogen, this conjugate induced antibody-dependent cellular cytotoxicity (ADCC) PSMA-expressing tumor cells mouse xenograft model....

10.1021/cb200222s article EN ACS Chemical Biology 2011-09-21

The contribution of the tumor microenvironment to pancreatic ductal adenocarcinoma (PDAC) development is currently unclear. We therefore examined consequences disrupting paracrine Hedgehog (HH) signaling in PDAC stroma. Herein, we show that ablation key HH gene Smoothened (Smo) stromal fibroblasts led increased proliferation cells. Furthermore, Smo deletion resulted proteasomal degradation suppressor PTEN and activation oncogenic protein kinase B (AKT) fibroblasts. An unbiased proteomic...

10.26508/lsa.201800190 article EN cc-by Life Science Alliance 2018-10-01

Vascular hypo-fibrinolysis is a historically underappreciated and understudied aspect of venous thromboembolism (VTE). This paper describes the development micro-clot dissolution assay for quantifying fibrinolytic capacity endothelial cells - key driver VTE development. enabled using aqueous two-phase systems (ATPS) to bioprint microscale fibrin clots over human umbilical vein (HUVECs). Importantly, these micro-clots are orders magnitude smaller than conventional constructs allow...

10.1002/adhm.202403043 article EN cc-by Advanced Healthcare Materials 2025-01-31

Imidazopyridine 1 was identified from a phenotypic screen against P. falciparum (Pf) blood stages and subsequently optimized for activity on liver-stage schizonts of the rodent parasite yoelii (Py) as well hypnozoites simian cynomolgi (Pc). We applied these various assays to cell-based lead optimization imidazopyrazines, exemplified by 3 (KAI407), show that compounds within series with improved pharmacokinetic properties achieve causal prophylactic in vivo may have potential target dormant...

10.1021/ml500244m article EN ACS Medicinal Chemistry Letters 2014-07-06

This paper describes an experimental characterization scheme of the biophysical properties reconstituted hydrogel matrices based on indentation testing, quantification transport via microfluidics, and confocal reflectance microscopy analysis. While methods for characterizing hydrogels exist are widely used, they often do not measure diffusive convective concurrently, determine relationship between microstructure properties, decouple matrix mechanics properties. Our integrated approach...

10.1021/acsbiomaterials.9b01873 article EN ACS Biomaterials Science & Engineering 2020-02-05

A novel family of 1H-imidazol-2-yl-pyrimidine-4,6-diamines has been identified with potent activity against the erythrocyte-stage Plasmodium falciparum (Pf), most common causative agent malaria. systematic SAR study resulted in identification compound 40 which exhibits good potency both wild-type and drug resistant parasites vivo pharmacokinetic properties.

10.1016/j.bmcl.2010.05.095 article EN cc-by-nc-nd Bioorganic & Medicinal Chemistry Letters 2010-06-03

Screening our in-house compound collection using a cell based Plasmodium falciparum proliferation assay we discovered known pan-kinase inhibitor scaffold as hit. Further optimization of this series led us to novel benzamide which was devoid human kinase activity while retaining its antiplasmodial activity. The evolution leading optimized candidates with good cellular potency against multiple strains well decent in vivo profile is described Letter.

10.1016/j.bmcl.2009.10.050 article EN cc-by Bioorganic & Medicinal Chemistry Letters 2009-10-16

This paper describes printing of microscale fibroblast-laden matrices using an aqueous two-phase approach that controls thrombin-mediated enzymatic crosslinking fibrin. Optimization formulations enabled polymerization consistent sub-microliter volumes cell-laden When plasminogen was added to these micro-scaffolds, the primary normal human lung fibroblasts converted it plasmin, triggering gradual degradation Time-lapse live-cell imaging and automated image analysis provided readouts time 50%...

10.1088/1758-5090/abdb85 article EN Biofabrication 2021-01-14
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