Huafeng Deng

ORCID: 0000-0003-3802-5708
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About
Contact & Profiles
Research Areas
  • GABA and Rice Research
  • Genetic Mapping and Diversity in Plants and Animals
  • Rice Cultivation and Yield Improvement
  • Microbial Metabolism and Applications
  • Photosynthetic Processes and Mechanisms
  • Plant Stress Responses and Tolerance
  • Plant Molecular Biology Research
  • Plant-Microbe Interactions and Immunity
  • Remote Sensing and Land Use
  • Plant Gene Expression Analysis
  • Plant nutrient uptake and metabolism
  • Genetics and Plant Breeding
  • Plant Reproductive Biology
  • Landslides and related hazards
  • Plant responses to water stress
  • Agriculture, Soil, Plant Science
  • Plant Parasitism and Resistance
  • Rock Mechanics and Modeling
  • Agricultural Systems and Practices
  • Geothermal Energy Systems and Applications
  • Biofuel production and bioconversion
  • Superconducting Materials and Applications
  • Integrated Energy Systems Optimization
  • Soil, Finite Element Methods
  • Invertebrate Immune Response Mechanisms

Hunan University
2023-2025

Hunan Academy of Agricultural Sciences
2016-2025

China National Hybrid Rice R&D Central Hunan Hybrid Rice Reserch Center
2014-2025

China Three Gorges University
2013-2025

SMC Corporation (Japan)
2025

State Key Laboratory of Hybrid Rice
2012-2022

Hunan Agricultural University
2016-2022

Central South University
2019

Hunan Rice Research Institute
2019

Rice University
2014

Success of modern agriculture relies heavily on breeding crops with maximal regional adaptability and yield potentials. A major limiting factor for crop cultivation is their flowering time, which strongly regulated by day length (photoperiod) temperature. Here we report identification characterization Days to heading 7 (DTH7), a genetic locus underlying photoperiod sensitivity grain in rice. Map-based cloning reveals that DTH7 encodes pseudo-response regulator protein its expression...

10.1073/pnas.1418204111 article EN Proceedings of the National Academy of Sciences 2014-11-05

By using a whole-genome oligonucleotide microarray, designed based on known and predicted indica rice genes, we investigated transcriptome profiles in developing leaves panicles of superhybrid LYP9 its parental cultivars 93-11 PA64s. We detected 22,266 expressed genes out 36,926 total set collectively from 7 tissues, including at seedling tillering stages, flag booting, heading, flowering, filling stage. Clustering results showed that the F1 hybrid's expression resembled those lines more...

10.1073/pnas.0902340106 article EN Proceedings of the National Academy of Sciences 2009-04-17

Abstract Traits such as grain shape, panicle length and seed shattering, play important roles in yield harvest. In this study, the cloning functional analysis of PANICLE TRAITS 2 ( PT2 ), a novel gene from Indica rice Chuandali (CDL), is reported. synonymous with Growth‐Regulating Factor 4 OsGRF4 which encodes growth‐regulating factor that positively regulates shape negatively shattering. Higher expression correlated larger grain, longer lower A unique mutation, occurs at OsmiRNA396 target...

10.1111/jipb.12473 article EN cc-by-nc-nd Journal of Integrative Plant Biology 2016-03-03

Chilling stress is considered the major abiotic affecting growth, development, and yield of rice. To understand transcriptomic responses methylation regulation rice in response to chilling stress, we analyzed a cold-tolerant variety (Oryza sativa L. cv. P427). The physiological properties, transcriptome, P427 seedlings under low-temperature (2-3 °C) were investigated. We found that exhibited enhanced tolerance low temperature, likely via increasing antioxidant enzyme activity promoting...

10.3390/ijms20205089 article EN International Journal of Molecular Sciences 2019-10-14

Abstract Genes that provide resistance to fungi and/or bacteria usually reduce plant growth and ultimately affect grain yield. Thus, crop breeding programs need find genetic resources balance disease with growth. The receptor kinase FERONIA regulates cell survival in Arabidopsis. Here, we investigate, rice, the role of members FERONIA-like (FLR) gene family between response fungal pathogen Magnaporthe oryzae (Pyricularia oryzae), which causes most devastating rice. We carried out genome-wide...

10.1093/jxb/erz541 article EN cc-by Journal of Experimental Botany 2020-01-24

Grain shape as a major determinant of rice yield and quality is widely believed to be controlled by quantitative trait loci (QTL). We have identified novel gene "GS2" largely regulate grain length width in rice. The GS2 allele the big-grain line 'CDL' functioned dominant manner. In present study, we employed chromosome walking strategy residual heterozygous lines from recombinant inbred population between cultivar "R1126" CDL, located an interval ~ 33.2 kb flanked marker GL2-35-1 GL2-12 long...

10.1016/j.cj.2013.10.003 article EN cc-by-nc-nd The Crop Journal 2013-10-24

Abstract The influence of block forms on the shear behaviour soil–rock mixtures with soft blocks (soft S–RMs) can be efficiently investigated by discrete element method (DEM) basis accurate 3D models accounting for breakage. This paper proposes a novel modelling approach, based spherical harmonics series, generation geometries different but same convexity and angularity. An already existing non-overlapping approach was improved, characterized reduced computational cost, set-up DEM A number...

10.1007/s00603-022-02795-x article EN cc-by Rock Mechanics and Rock Engineering 2022-02-15

The Shenyu River, as the tributary of Jinsha River closest to Wudongde Hydropower Station, has had seven landslides developed on its right bank, forming an interconnected landslide group system. evolution and future development trends have a significant impact safe operation Station. Using geological field surveys exploration data, we studied analyzed formation mechanism bank in reservoir area main conclusions are follows: local structure study is mainly composed north–south faults folds,...

10.3390/w17040505 article EN Water 2025-02-11

Low temperature is one of the major abiotic stresses that severely restrict development rice. It has been demonstrated previously OsGRF4 enhances cold tolerance in rice, molecular mechanism which remains unknown. This study employed a combination proteome and ubiquitylome approaches to analyze mediated chilling between overexpression line (OX) wild type (CK). Proteome results showed 6,157 proteins were identified 5,045 quantified after 24-h treatment. A total 59 upregulated 63 downregulated...

10.3389/fpls.2025.1531399 article EN cc-by Frontiers in Plant Science 2025-03-21

RNA metabolism regulation is crucial for the modulation of gene expression in plants subjected to external stresses. However, how transmit signals via membrane receptors drive has not been determined. In this study, we found that rice FERONIA-like receptor 2 (FLR2) modulates innate immunity by inducing translation immune regulator OsEIL1 promote resistance Magnaporthe oryzae. FLR2 interacts with and phosphorylates mRNA processing factor CONSTITUTIVE EXPRESSER OF PATHOGENESIS-RELATED GENES 5...

10.1016/j.xplc.2025.101347 article EN cc-by-nc-nd Plant Communications 2025-05-01

To clarify the microRNA (miRNA)-target gene axis is involved in response to pathogen-associated molecular pattern (PAMP)-induced oxidative stress shellfish, full-length cDNA of a novel mitogen-activated protein kinase-interacting kinase 1 ( MNK1 ) homolog from scallop Patinopecten yessoensis PyMNK1 was cloned and characterized. The interaction between miR-1985 verified, then responses possible function miR-1985, , miR-1985/ poly(I:C) (a classic virus-related PAMP) stimulation P. were...

10.3389/fimmu.2025.1556591 article EN cc-by Frontiers in Immunology 2025-05-08

Soil salinization is a threat to food security. China rich in saline land resources for potential and current utilization. The cultivation promotion of salt-tolerant rice varieties can greatly improve the utilization this land. super hybrid Chaoyouqianhao (CY1000) one most widely used, but molecular mechanism underlying its salt tolerance not clear.In study, characteristics CY1000 parents were evaluated field laboratory. results showed that aboveground parts barely influenced by stress,...

10.1186/s12870-022-03586-w article EN cc-by BMC Plant Biology 2022-05-07

To reveal the mechanical properties of rocks under stress disturbance and unloading confining pressure, conventional triaxial compression tests, tests on damaged sandstone, cyclic loading sandstone were conducted. Then, evolutionary characteristics dissipated energy in explored, damage variables proposed. The crack development analyzed from a microscopic perspective. study results that: (1) exhibits obvious brittle failure different paths, macroscopic mode is dominated by shear failure. As...

10.1038/s41598-023-33721-y article EN cc-by Scientific Reports 2023-05-05

The genomic expression profile of the super-hybrid rice Liangyoupeijiu female parent Pei'ai 64S in different tissues at developmental stages under low temperature, drought, and high temperature stresses were detected using an Affymetrix GeneChip Rice Genome Array to screen upregulated downregulated genes.In this study, we screened drought-resistant gene OsRCI2-5, after which a constitutive OsRCI2-5 construct was created transferred into Nipponbare.After polyethylene glycol-6000 drought...

10.4238/2014.may.23.13 article EN Genetics and Molecular Research 2014-01-01

Panicle traits in rice impact yield and quality. The OsGRF4 gene encodes a growth-regulating factor controlling panicle traits, was recently cloned. Gene expression profiling analysis can be used to study the molecular mechanisms underlying regulation. Use of near-isogenic lines (NILs) reduces genetic background noise omics studies. We compared transcriptome 7 cm long young panicles NIL-Osgrf4 NIL-OsGRF4 using RNAs sequence analyses. Eighty differentially expressed genes (DEGs) were...

10.1371/journal.pone.0199077 article EN cc-by PLoS ONE 2018-06-20

JAZ proteins function as transcriptional regulators that form a jasmonic acid–isoleucine (JA-Ile) receptor complex with coronatine insensitive 1 (COI1) and regulate plant growth development. These also act key mediators in signal transduction pathways activate the defense-related genes. Herein, role of OsJAZ4 rice blast resistance, severe disease, was examined. The mutation revealed its significance Magnaporthe oryzae (M. oryzae) resistance seed setting rate rice. In addition, weaker M....

10.3390/plants13030348 article EN cc-by Plants 2024-01-24

Calcium (Ca 2+ ) is the most abundant divalent cation in plants, and cellular levels of Ca , which functions as a nutrient secondary messenger, play critical role plant immunity. In present study, we found that FERONIA-like receptor 1 (FLR1) positively regulates Magnaporthe oryzae resistance expression FLR1 strongly induced response to deficiency. addition, content shoots flr1 was lower than wild-type, M. -sensitive phenotype mutant not rescued by exogenous application . Moreover, RNA...

10.3389/fpls.2022.934195 article EN cc-by Frontiers in Plant Science 2022-09-23
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