Brent L. Fogel

ORCID: 0000-0001-9831-1576
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About
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Research Areas
  • Genetic Neurodegenerative Diseases
  • Mitochondrial Function and Pathology
  • Genomics and Rare Diseases
  • Genetics and Neurodevelopmental Disorders
  • RNA regulation and disease
  • RNA Research and Splicing
  • Genomic variations and chromosomal abnormalities
  • DNA Repair Mechanisms
  • Parkinson's Disease Mechanisms and Treatments
  • Neurological disorders and treatments
  • RNA modifications and cancer
  • Metabolism and Genetic Disorders
  • Ubiquitin and proteasome pathways
  • Genetic factors in colorectal cancer
  • Cellular transport and secretion
  • Neurogenetic and Muscular Disorders Research
  • Lysosomal Storage Disorders Research
  • Congenital heart defects research
  • RNA and protein synthesis mechanisms
  • Amyotrophic Lateral Sclerosis Research
  • Neurological diseases and metabolism
  • Glycogen Storage Diseases and Myoclonus
  • Endoplasmic Reticulum Stress and Disease
  • Hereditary Neurological Disorders
  • Retinal Development and Disorders

University of California, Los Angeles
2016-2025

UCLA Health
2013-2025

University of California System
2022-2023

NYU Langone Health
2022

University Medical Center
2022

University of Utah
2021

University of Chicago
2019-2020

Harvard University
2020

Murdoch Children's Research Institute
2020

Tel Aviv University
2018-2020

Clinical exome sequencing (CES) is rapidly becoming a common molecular diagnostic test for individuals with rare genetic disorders.To report on initial clinical indications CES referrals and rates different types.Clinical was performed 814 consecutive patients undiagnosed, suspected conditions at the University of California, Los Angeles, Genomics Center between January 2012 August 2014. conducted as trio-CES (both parents their affected child sequenced simultaneously) to effectively detect...

10.1001/jama.2014.14604 article EN JAMA 2014-10-18

<h3>Importance</h3> Cerebellar ataxias are a diverse collection of neurologic disorders with causes ranging from common acquired etiologies to rare genetic conditions. Numerous have been associated chronic progressive ataxia and this consequently presents diagnostic challenge for the clinician regarding how approach prioritize testing in patients such clinically heterogeneous phenotypes. Additionally, while value early-onset and/or familial cases seems clear, many present sporadically adult...

10.1001/jamaneurol.2014.1944 article EN JAMA Neurology 2014-08-18

Genomic technologies such as next-generation sequencing (NGS) are revolutionizing molecular diagnostics and clinical medicine. However, these approaches have proven inefficient at identifying pathogenic repeat expansions. Here, we apply a collection of bioinformatics tools that can be utilized to identify either known or novel expanded sequences in NGS data. We performed genetic studies cohort 35 individuals from 22 families with diagnosis cerebellar ataxia neuropathy bilateral vestibular...

10.1016/j.ajhg.2019.05.016 article EN cc-by The American Journal of Human Genetics 2019-06-20

The diagnosis of Parkinson's disease (PD) and atypical parkinsonian syndromes is difficult due to the lack reliable, easily accessible biomarkers. Multiple system atrophy (MSA) a synucleinopathy whose symptoms often overlap with PD. Exosomes isolated from blood by immunoprecipitation using CNS markers provide window into brain's biochemistry may assist in distinguishing between PD MSA. Thus, we asked whether α-synuclein (α-syn) such exosomes could distinguish among healthy individuals,...

10.1007/s00401-021-02324-0 article EN cc-by Acta Neuropathologica 2021-05-15

RNA splicing plays a critical role in the programming of neuronal differentiation and, consequently, normal human neurodevelopment, and its disruption may underlie neurodevelopmental neuropsychiatric disorders. The RNA-binding protein, fox-1 homolog (RBFOX1; also termed A2BP1 or FOX1), is neuron-specific factor predicted to regulate networks clinically implicated disease, including autism spectrum disorder (ASD), but only few targets have been experimentally identified. We used sequencing...

10.1093/hmg/dds240 article EN Human Molecular Genetics 2012-06-23

To determine whether recombinant human granulocyte colony-stimulating factor (rhG-CSF) can accelerate recovery after high-dose combination chemotherapy with autologous bone marrow transplantation (ABMT) in patients Hodgkin's disease, we performed a nonrandomized phase II study using historical controls as comparison. Eighteen relapsed/refractory disease who received cyclophosphamide at 1.5 g/m2/day (days -6 to -3), carmustine (BCNU) 300 mg/m2 (day -6), and etoposide (VP-16) 125 every 12...

10.1200/jco.1989.7.12.1791 article EN Journal of Clinical Oncology 1989-12-01

Abstract Objective: Adult polyglucosan body disease (APBD) is an autosomal recessive leukodystrophy characterized by neurogenic bladder, progressive spastic gait, and peripheral neuropathy. Polyglucosan bodies accumulate in the central nervous systems are often associated with glycogen branching enzyme (GBE) deficiency. To improve clinical diagnosis enable future evaluation of therapeutic strategies, we conducted a multinational study natural history imaging features APBD. Methods: We...

10.1002/ana.23598 article EN Annals of Neurology 2012-04-01

Here we report whole exome sequencing (WES) on a cohort of 71 patients with persistently unresolved white matter abnormalities suspected diagnosis leukodystrophy or genetic leukoencephalopathy. WES analyses were performed trio, greater, family groups. Diagnostic pathogenic variants identified in 35% (25 71) patients. Potentially clinically relevant genes further 7% (5 cases, giving total yield clinical diagnoses 42% individuals. These findings provide evidence that can substantially decrease...

10.1002/ana.24650 article EN publisher-specific-oa Annals of Neurology 2016-05-09
Paul C. Marcogliese Vandana Shashi Rebecca C. Spillmann Nicholas Stong Jill A. Rosenfeld and 95 more Mary Kay Koenig Julián A. Martínez-Agosto Matthew Herzog Agnes H. Chen Patricia Dickson Henry J. Lin Moin Vera Noriko Salamon John M. Graham Damara Ortiz Elena Infante Wouter Steyaert Bart Dermaut Bruce Poppe Hyunglok Chung Zhongyuan Zuo Pei-Tseng Lee Oguz Kanca Fan Xia Yaping Yang Edward C. Smith Joan Jasien Sujay Kansagra Gail A. Spiridigliozzi Mays El-Dairi Robert K. Lark Kacie Riley Dwight D. Koeberl Katie Golden‐Grant Shinya Yamamoto Michael F. Wangler Ghayda Mirzaa Dimitri Hemelsoet Brendan Lee Stanley F. Nelson David B. Goldstein Hugo J. Bellen Loren D.M. Peña Steven Callens Paul Coucke Bart Dermaut Dimitri Hemelsoet Bruce Poppe Wouter Steyaert Wim Terryn Rudy Van Coster David R. Adams Mercedes E. Alejandro Patrick Allard Mahshid S. Azamian Carlos A. Bacino Ashok Balasubramanyam Hayk Barseghyan Gabriel F. Batzli Alan H. Beggs Babak Behnam Anna Bican David Bick Camille L. Birch Devon Bonner Braden Boone Bret L. Bostwick Lauren C. Briere Donna M. Brown Matthew Brush Elizabeth A. Burke Lindsay C. Burrage Shan Chen Gary Clark Terra R. Coakley Joy D. Cogan Cynthia M. Cooper Heidi Cope William J. Craigen Precilla D’Souza Mariska Davids Jyoti G. Dayal Esteban C. Dell’Angelica Shweta U. Dhar Ani Dillon Katrina M. Dipple Laurel A. Donnell‐Fink Naghmeh Dorrani Daniel C. Dorset Emilie D. Douine David D. Draper David J. Eckstein Lisa Emrick Christine M. Eng Ascia Eskin Cecilia Esteves Tyra Estwick Carlos R. Ferreira Brent L. Fogel Noah D. Friedman

10.1016/j.ajhg.2018.07.006 article EN publisher-specific-oa The American Journal of Human Genetics 2018-07-26
Elena‐Raluca Nicoli Mary Weston Mary E. Hackbarth Alissa J. Becerril Austin Larson and 95 more Wadih M. Zein Peter R. Baker John D. Burke Heidi Dorward Mariska Davids Yan Huang David R. Adams Patricia M. Zerfas Dong Chen Thomas C. Markello Camilo Toro Tim Wood Gene Elliott Mylinh Vu Wei Zheng Lisa Garrett Cynthia J. Tifft William A. Gahl Debra Day‐Salvatore Joseph A. Mindell May Christine V. Malicdan Maria T. Acosta David R. Adams Pankaj B. Agrawal Mercedes E. Alejandro Patrick Allard Justin Alvey Ashley Andrews Euan A. Ashley Mahshid S. Azamian Carlos A. Bacino Güney Bademci Eva H. Baker Ashok Balasubramanyam Dustin Baldridge Jim Bale Deborah Barbouth Gabriel F. Batzli Pinar Bayrak‐Toydemir Alan H. Beggs Gill Bejerano Hugo J. Bellen Jonathan A. Bernstein Gerard T. Berry Anna Bican David Bick Camille L. Birch Stephanie Bivona John Bohnsack Carsten Bonnenmann Devon Bonner Braden Boone Bret L. Bostwick Lorenzo D. Botto Lauren C. Briere Elly Brokamp Donna M. Brown Matthew Brush Elizabeth A. Burke Lindsay C. Burrage Manish J. Butte John C. Carey Olveen Carrasquillo Ta Chen Chang Hsiao‐Tuan Chao Gary Clark Terra R. Coakley Laurel A. Cobban Joy D. Cogan F. Sessions Cole Heather A. Colley Cynthia M. Cooper Heidi Cope William J. Craigen Precilla D’Souza Surendra Dasari Mariska Davids Jyoti G. Dayal Esteban C. Dell’Angelica Shweta U. Dhar Naghmeh Dorrani Daniel C. Dorset Emilie D. Douine David D. Draper Laura Duncan David J. Eckstein Lisa Emrick Christine M. Eng Cecilia Esteves Tyra Estwick Liliana Fernández Carlos R. Ferreira Elizabeth L. Fieg Paul G. Fisher Brent L. Fogel

10.1016/j.ajhg.2019.04.008 article EN publisher-specific-oa The American Journal of Human Genetics 2019-05-30
Laura Cif Diane Demailly Jean‐Pierre Lin Katy Barwick Mario Sa and 95 more Lucia Abela Sony Malhotra W.K. Chong Dora Steel Alba Sanchis-Juan Adeline Ngoh Natalie Trump Esther Meyer Xavier Vasques Julia Rankin Meredith W Allain Carolyn Applegate Sanaz Attaripour Isfahani Julien Baleine Bettina Balint Jennifer A. Bassetti Emma L. Baple Kailash P. Bhatia Catherine Blanchet Lydie Bürglen Gilles Cambonie Emilie Chan Seng Sandra Chantot‐Bastaraud Fabienne Cyprien Christine Coubes Vincent d’Hardemare Asif Doja Nathalie Dorison Diane Doummar Marisela Dy-Hollins Ellyn Farrelly David Fitzpatrick Conor Fearon Elizabeth L. Fieg Brent L. Fogel Eva Forman Rachel Fox William A. Gahl Serena Galosi Victoria González Tracey D. Graves Allison Gregory Mark Hallett Harutomo Hasegawa Susan J. Hayflick Ada Hamosh Marie Hully Sandra Jansen Suh Young Jeong Joel B. Krier Sidney Krystal Kishore R. Kumar Chloé Laurencin Hane Lee Gaëtan Lesca Laurence Lion François Timothy Lynch Neil Mahant Julián A. Martínez-Agosto Christophe Milési Kelly A. Mills M. Mondain Hugo Morales‐Briceño John R. Østergaard Swasti Pal J. Carl Pallais Frédérique Pavillard Pierre-Francois Perrigault Andrea Petersen Gustavo Polo Gaëtan Poulen Tuula Rinne Thomas Roujeau Caleb Rogers Agathe Roubertie Michelle Sahagian Élise Schaefer Laila Selim Richard Selway Nutan Sharma Rebecca Signer Ariane Soldatos David A. Stevenson Fiona Stewart Michel Tchan Ishwar C. Verma Bert B A de Vries Jenny L. Wilson Derek A. Wong Raghda Mohamed Hesham Zaitoun Dolly Zhen Anna Znaczko Russell C. Dale Claudio M. de Gusmão Jennifer Friedman

Abstract Heterozygous mutations in KMT2B are associated with an early-onset, progressive and often complex dystonia (DYT28). Key characteristics of typical disease include focal motor features at presentation, evolving through a caudocranial pattern into generalized dystonia, prominent oromandibular, laryngeal cervical involvement. Although KMT2B-related is emerging as one the most common causes early-onset genetic much remains to be understood about full spectrum disease. We describe cohort...

10.1093/brain/awaa304 article EN Brain 2020-08-24
Marcello Scala Masashi Nishikawa Hidenori Ito Hidenori Tabata Tayyaba Khan and 92 more Andrea Accogli Laura Davids Anna Ruiz Pietro Chiurazzi Gabriella Cericola Björn Schulte Kristin G. Monaghan Amber Begtrup Annalaura Torella Michele Pinelli Anne‐Sophie Denommé‐Pichon Antonio Vitobello Caroline Racine Maria Margherita Mancardi Courtney Kiss Andrea Guerin Wendy Wu Elisabeth Gabau Vila Bryan C. Mak Julián A. Martínez-Agosto Michael B. Gorin Bugrahan Duz Yavuz Bayram Claudia M.B. Carvalho Jaime E Vengoechea David Chitayat Tiong Yang Tan Bert Callewaert Bernd Kruse Lynne M. Bird Laurence Faivre Marcella Zollino Saskia Biskup Gabrielle Brown Manish J. Butte Esteban C. Dell’Angelica Naghmeh Dorrani Emilie D. Douine Brent L. Fogel Irma Gutierrez Alden Huang Deborah Krakow Hane Lee Sandra K. Loo Bryan C. Mak Martín G. Martín Julián A. Martínez-Agosto Elisabeth McGee Stanley F. Nelson Shirley Nieves‐Rodriguez Christina G.S. Palmer Jeanette C. Papp Neil H. Parker Genecee Renteria Janet S. Sinsheimer Jijun Wan Lee-kai Wang Katherine Wesseling Perry Vincenzo Nigro Nicola Brunetti‐Pierri Giorgio Casari Gerarda Cappuccio Annalaura Torella Michele Pinelli Francesco Musacchia Margherita Mutarelli Diego Carrella Giuseppina Vitiello Valeria Capra Giancarlo Parenti Vincenzo Leuzzi Angelo Selicorni Silvia Maitz Sandro Banfi Marcella Zollino Mario Montomoli Donatelli Milani Corrado Romano Albina Tummolo Daniele De Brasi Antonietta Coppola Claudia Santoro Angela Peron Chiara Pantaleoni Raffaele Castello Stefano D’Arrigo Pasquale Striano Vincenzo Nigro Mariasavina Severino Valeria Capra Gregory Costain Koh Nagata

Abstract Variants in RAC3, encoding a small GTPase RAC3 which is critical for the regulation of actin cytoskeleton and intracellular signal transduction, are associated with rare neurodevelopmental disorder structural brain anomalies facial dysmorphism. We investigated cohort 10 unrelated participants presenting global psychomotor delay, hypotonia, behavioural disturbances, stereotyped movements, dysmorphic features, seizures musculoskeletal abnormalities. MRI revealed complex pattern...

10.1093/brain/awac106 article EN cc-by Brain 2022-03-19
Victoria E. Rael Julian A. Yano John Huizar Leianna C. Slayden Madeleine A. Weiss and 95 more Elizabeth A. Turcotte J M Terry Wenqi Zuo Isabelle Thiffault Tomi Pastinen Emily Farrow Janda Jenkins Mara L. Becker Stephen C. Wong Anne M. Stevens Catherine Otten Eric J. Allenspach Devon Bonner Jonathan A. Bernstein Matthew T. Wheeler Robert A. Saxton Maria T. Acosta David R. Adams Raquel L. Alvarez Justin Alvey Aimee Allworth Ashley Andrews Euan A. Ashley Ben Afzali Carlos A. Bacino Güney Bademci Ashok Balasubramanyam Dustin Baldridge Jim Bale Michael J. Bamshad Deborah Barbouth Pınar Bayrak‐Toydemir Anita Beck Alan H. Beggs Edward M. Behrens Gill Bejerano Hugo J. Bellen Jimmy Bennett Jonathan A. Bernstein Gerard T. Berry Anna Bican Stephanie Bivona Elizabeth Blue John Bohnsack Devon Bonner Lorenzo D. Botto Lauren C. Briere Gabrielle Brown Elizabeth A. Burke Lindsay C. Burrage Manish J. Butte Peter H. Byers William E. Byrd John M. Carey Thomas Cassini Sirisak Chanprasert Hsiao‐Tuan Chao Iván K. Chinn Gary Clark Terra R. Coakley Laurel A. Cobban Joy D. Cogan Matthew Coggins F. Sessions Cole Heather A. Colley Rosario I. Corona William J. Craigen Andrew B. Crouse Michael L. Cunningham Precilla D’Souza Hongzheng Dai Surendra Dasari Joie Davis Jyoti G. Dayal Margaret Delgado Esteban C. Dell’Angelica Katrina M. Dipple Daniel Doherty Naghmeh Dorrani Argenia L. Doss Emilie D. Douine Dawn Earl David J. Eckstein Lisa Emrick Christine M. Eng Marni J. Falk Elizabeth L. Fieg Paul G. Fisher Brent L. Fogel Jiayu Fu William A. Gahl I. S. Glass Pagé C. Goddard Rena A. Godfrey Andrea Gropman

Nucleic acid-sensing Toll-like receptors (TLR) 3, 7/8, and 9 are key innate immune sensors whose activities must be tightly regulated to prevent systemic autoimmune or autoinflammatory disease virus-associated immunopathology. Here, we report a systematic scanning-alanine mutagenesis screen of all cytosolic luminal residues the TLR chaperone protein UNC93B1, which identified both negative positive regulatory regions affecting TLR3, TLR7, TLR9 responses. We subsequently two families harboring...

10.1084/jem.20232005 article EN cc-by The Journal of Experimental Medicine 2024-05-23

Abstract Parkinson’s disease (PD), the second most common neurodegenerative disorder, develops sporadically, likely through a combination of polygenic and environmental factors. Previous studies associate pesticide exposure genes involved in lysosomal function with PD risk. We evaluated frequency variants among patients from Parkinson’s, Environment, Genes (PEG) study ambient agricultural sources. 757 patients, primarily White European/non-Hispanic ancestry (75%), were screened for 85 using...

10.1038/s41531-024-00703-4 article EN cc-by npj Parkinson s Disease 2024-04-25
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