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Ashley Duplessis

ORCID: 0000-0002-9251-1371
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A5003029028
Research Areas
  • SARS-CoV-2 and COVID-19 Research
  • Immune responses and vaccinations
  • COVID-19 epidemiological studies
  • SARS-CoV-2 detection and testing

Heinrich Heine University Düsseldorf
 2021

Düsseldorf University Hospital
 2021

 Characterization of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection Clusters Based on Integrated Genomic Surveillance, Outbreak Analysis and Contact Tracing in an Urban Setting
OPENALEX - Publications 
Andreas Walker Torsten Houwaart Patrick Finzer Lutz Ehlkes Alona Tyshaieva and 95 more Maximilian Damagnez Daniel Strelow Ashley Duplessis Jessica Nicolai Tobias Wienemann Teresa Tamayo Malte Kohns Vasconcelos Lisanna Hülse Katrin Hoffmann Nadine Lübke Sandra Hauka Marcel Andrée Martin Däumer Alexander Thielen Susanne Kolbe-Busch Klaus Göbels Rainer B. Zotz Klaus Pfeffer Jörg Timm Alexander Dilthey Janine Altmüller Angel Angelov Anna C. Aschenbrenner Robert Bals Alexander Bartholomäus Anke Becker Daniela Bezdan Michael Bitzer Helmut Blum Ezio Bonifacio Peer Bork Nicolas Casadei Thomas Clavel Maria Colomé‐Tatché Inti Alberto De La Rosa Velázquez Andreas Diefenbach Alexander Dilthey Nicole Fischer Konrad U. Förstner Sören Franzenburg Julia-Stefanie Frick Gisela Gabernet Julien Gagneur Tina Ganzenmüller Marie Gauder Alexander Goesmann Siri Göpel Adam Grundhoff Hajo Grundmann Torsten Hain André Heimbach Michael Hummel Thomas Iftner Angelika Iftner Stefan Janssen Jörn Kalinowski René Kallies Birte Kehr Andreas Keller Oliver T. Keppler Sarah Kim-Hellmuth Christoph Klein Michael Knop Oliver Kohlbacher Karl Köhrer Jan O. Korbel Peter G. Kremsner Denise Kühnert Ingo Kurth Markus Landthaler Yang Li Kerstin U. Ludwig Oliwia Makarewicz Manja Marz Alice C. McHardy Christian Mertes Maximilian Münchhoff Sven Nahnsen Markus M. Nöthen Francine Ntoumi Peter J. Nürnberg Uwe Ohler Stephan Ossowski Jörg Overmann Silke Peter Klaus Pfeffer Anna R. Poetsch Ulrike Protzer Alfred Pühler Nikolaus Rajewsky Markus Ralser Olaf Rieß Stephan Ripke Ulisses Nunes da Rocha Philip Rosenstiel

Abstract Background Tracing of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission chains is still a major challenge for public health authorities, when incidental contacts are not recalled or perceived as potential risk contacts. Viral sequencing can address key questions about SARS-CoV-2 evolution and may support reconstruction viral networks by integration molecular epidemiology into classical contact tracing. Methods In collaboration with local we set up an...

10.1093/cid/ciab588 article EN cc-by-nc-nd Clinical Infectious Diseases 2021-06-25
 Characterization of SARS-CoV-2 genetic structure and infection clusters in a large German city based on integrated genomic surveillance, outbreak analysis, and contact tracing
OPENALEX - Publications 
Andreas Walker Torsten Houwaart Patrick Finzer Lutz Ehlkes Alona Tyshaieva and 20 more Maximilian Damagnez Daniel Strelow Ashley Duplessis Jessica Nicolai Tobias Wienemann Teresa Tamayo Malte Kohns Vasconcelos Lisanna Hülse Katrin Hoffmann Nadine Lübke Sandra Hauka Marcel Andrée Martin Däumer Alexander Thielen Susanne Kolbe-Busch Klaus Göbels Rainer B. Zotz Klaus Pfeffer Jörg Timm Alexander Dilthey

Abstract Viral genome sequencing can address key questions about SARS-CoV-2 evolution and viral transmission. Here, we present an integrated system of genomic surveillance in the German city Düsseldorf, combining a) sequencing, b) genetically based identification infection clusters population, c) analysis hospital outbreaks, d) integration public health authority contact tracing data, e) a user-friendly dashboard application as central data platform. The generated (n = 320 genomes) showed...

10.1101/2021.02.13.21251678 preprint EN medRxiv (Cold Spring Harbor Laboratory) 2021-02-18
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