Song Zhang

ORCID: 0000-0003-1641-4462
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About
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Research Areas
  • Plant tissue culture and regeneration
  • Genetic Mapping and Diversity in Plants and Animals
  • Cocoa and Sweet Potato Agronomy
  • Animal Genetics and Reproduction
  • Plant Pathogens and Fungal Diseases
  • Genetic and phenotypic traits in livestock
  • Plant Virus Research Studies
  • Advances in Cucurbitaceae Research
  • Plant-Microbe Interactions and Immunity
  • Entomopathogenic Microorganisms in Pest Control
  • Genomics and Phylogenetic Studies
  • Diabetes and associated disorders
  • Virus-based gene therapy research
  • Garlic and Onion Studies
  • Immune Cell Function and Interaction
  • Plant Pathogenic Bacteria Studies
  • Mycotoxins in Agriculture and Food
  • Reproductive biology and impacts on aquatic species
  • Yersinia bacterium, plague, ectoparasites research
  • Seed Germination and Physiology
  • Crystallization and Solubility Studies
  • Plant and Fungal Interactions Research
  • Digestive system and related health
  • Bacterial Genetics and Biotechnology
  • Vector-borne infectious diseases

Chinese Academy of Agricultural Sciences
2016-2025

Agricultural Genomics Institute at Shenzhen
2020-2025

Xinqiao Hospital
2025

Army Medical College
2025

Army Medical University
2016-2025

Ministry of Agriculture Livestock and Fisheries
2024

Ministry of Agriculture and Agro Based Industry
2024

Shandong Agricultural University
2004-2024

Institute of Crop Sciences
2022-2023

Ministry of Agriculture and Rural Affairs
2022-2023

The genetic mechanisms that underlie phenotypic differentiation in breeding animals have important implications evolutionary biology and agriculture. However, the contribution of cis-regulatory variants to pig phenotypes is poorly understood. Therefore, our aim was elucidate molecular by which non-coding cause differences pigs combining analyses functional genomics.We obtained a high-resolution phased chromosome-scale reference genome with contig N50 18.03 Mb for Luchuan breed (a...

10.1186/s12711-022-00754-2 article EN cc-by Genetics Selection Evolution 2022-09-14

Abstract Whole‐genome sequencing is pivotal for elucidating the complex relationships between genotype and phenotype. However, its widespread application hindered by high depth large sample sizes required, especially genomic selection (GS) reliant on precise phenotype prediction from high‐density data. To address this, DPImpute (Dual‐Phase Impute) developed, an two‐step imputation pipeline enabling accurate whole‐genome SNP genotyping under ultra‐low coverage (ulcWGS) depths, small testing...

10.1002/advs.202412482 article EN cc-by Advanced Science 2025-02-27

This study aimed to compare bacterial community structure differences in yellow paddy soil under long-term chemical/organic fertilisation and fertiliser conversion guide farmland strategies loam areas. Treatments included (1) continuous application of chemical fertilisers for 27 years (CF-CF); (2) continuously 24 then organic 3 (CF-OF); (3) (OF-OF); (4) (OF-CF). The results show that alters genus-level taxa, while mode changes significantly increase taxa quantities at both phylum genus...

10.3390/agronomy15030749 article EN cc-by Agronomy 2025-03-20

A previously unreported disease affecting jujube (Ziziphus jujuba Mill) trees was observed in China (Liaoning province) 2015 and named yellow mottle (JYMD), due to prevalent symptoms on the leaves. Diseased plants produced also malformed discolored fruits. In an attempt identify possible causal agent of JYMD, high-throughput sequencing small RNA libraries performed a novel virus, tentatively mottle-associated emaravirus (JYMaV), identified characterized. Six genomic segments JYMaV were...

10.3389/fmicb.2019.01417 article EN cc-by Frontiers in Microbiology 2019-06-25

Abstract Glomerella leaf spot (GLS), characterized by black necrotic spots and severe defoliation, is a destructive foliar disease of apple. Widely grown cultivars such as Gala Golden Delicious are highly susceptible to GLS. Currently, the infection biology causal pathogen, Colletotrichum fructicola , on apple leaves unclear. In present study, penetration colonization processes C. were (cv. Gala) using light transmission electron microscopy. conidia produced germ tubes 4 hours...

10.1111/ppa.13141 article EN Plant Pathology 2020-01-07

High temperature is one of the major abiotic stresses that affect cucumber growth and development. Heat stress often leads to metabolic malfunction, dehydration, wilting death, which has a great impact on yield fruit quality. In this study, genetic analysis quantitative trait loci (QTL) mapping for thermotolerance in seedlings was investigated using recombinant inbred line (RILs; HR) population doubled haploid (DH; HP) derived from two parental lines ‘65G’ (heat-sensitive) ‘02245′...

10.3390/plants9091155 article EN cc-by Plants 2020-09-07

The non-obese diabetic (NOD) mouse is a commonly used animal model for studying type 1 diabetes (T1D). aims of our study were to explore the diabetes-preventive effect in NOD mice and potential mechanisms an optimized co-expression DNA vaccine containing GAD65 fragment gene with IL-10 (SGAD65190-315 /IL-10).Female at age 3-4 weeks old randomly divided into two groups received intra-muscular injection either blank pBudCE4.l vector (n = 34) or carrying SGAD65190-315 /IL-10 32). incidence was...

10.1002/dmrr.2780 article EN Diabetes/Metabolism Research and Reviews 2016-01-21

To compare the differences in soil microbial community structure yellow paddy fields after long-term application of chemical fertilizer, role and mechanism fertilizer maintaining diversity were analyzed, a theoretical basis for fertilization management farmlands was provided. In this study, experiments conducted at Scientific Observation Experimental Station Arable Land Conservation Agricultural Environment (Guizhou), Ministry Agriculture Rural Affairs. Soil samples collected from five...

10.3390/agronomy14061186 article EN cc-by Agronomy 2024-05-31

Mechanized harvesting of cucumbers offers significant advantages compared to manual labor as both shortages and costs increase. However the efficient use machines depends on breeding plants with longer peduncles, but genetic molecular basis fruit peduncle development in cucumber is not well understood. In this study, F2 populations were developed from a cross between two inbred lines, 1101 long 1694 short peduncle. These grown at field sites, Hainan, tropical marine climate, December 2014,...

10.1371/journal.pone.0167845 article EN cc-by PLoS ONE 2016-12-09

Impatiens (Impatiens walleriana) is a top selling floriculture crop. The potential for genetic transformation of to introduce novel flower colors or virus resistance has been limited by its general recalcitrance tissue culture and manipulations. We have established regeneration system that provides new alternatives improvement this In first step towards the development transgenic INSV-resistant Impatiens, we developed an efficient plant using hypocotyl segments containing cotyledonary nodes...

10.1186/1471-2229-10-165 article EN cc-by BMC Plant Biology 2010-01-01

Abstract Poor seed germination of cucumber at suboptimal temperatures is a great concern for growers wishing to take advantage the early market. The development low‐temperature‐tolerant varieties would be aided by understanding inheritance trait and mapping its locus. In this study, set 140 recombinant inbred lines ( RIL s) derived from cross between 65G (low‐temperature‐tolerant) 02245 (low‐temperature‐sensitive) was used identify QTL s linked with low‐temperature tolerance. A linkage map...

10.1111/pbr.12601 article EN Plant Breeding 2018-06-12

HomePlant DiseaseVol. 103, No. 12Loquat Is a New Natural Host of Apple Stem Grooving Virus and Chlorotic Leaf Spot in China PreviousNext DISEASE NOTES OPENOpen Access licenseLoquat ChinaQiyan Liu, Zhiyou Xuan, Jiaxing Wu, Yuanjian Qiu, Min Li, Song Zhang, Di Ruhui Mengji CaoQiyan LiuNational Citrus Engineering Technology Research Center, Institute, Southwest University, Beibei, Chongqing 400712, ChinaAcademy Agricultural Sciences, 400715, China, XuanNational WuNational QiuNational LiNational...

10.1094/pdis-04-19-0721-pdn article EN other-oa Plant Disease 2019-07-19

Using the human telomerase reverse transcriptase (hTERT) promoter and modified ferritin heavy chain (Fth) reporter gene, gene expression for MRI was examined in positive negative tumour cells xenografts. Activity of vector Lenti-hTERT-Fth1-3FLAG-Puro compared to constitutive CMV-driven untransfected parental control five cell lines: A549, SKOV3, 293T, U2OS HPDLF. In vitro, transfected were evaluated FLAG-tagged protein expression, iron accumulation transverse relaxation. vivo, tumours...

10.1007/s00330-016-4259-9 article EN cc-by-nc European Radiology 2016-03-09

In flowering plants, RNA editing is a post-transcriptional process that selectively deaminates cytidines (C) to uridines (U) in organellar transcripts. Pentatricopeptide repeat (PPR) proteins have been identified as site-specific recognition factors for editing. Here, we report the map-based cloning and molecular characterization of defective kernel mutant dek504 maize. Loss Dek504 function leads delayed embryogenesis endosperm development, which produce small collapsed kernels. encodes an...

10.3390/ijms23052513 article EN International Journal of Molecular Sciences 2022-02-24

To determine the incidence and trends over 2001-2022 of childhood-onset type 1 diabetes (T1D) in Western Australia assess impact COVID-19 pandemic.Children newly diagnosed with T1D aged 0-14 years from January 2001 to 31 December 2022 were identified population-based Australian Children's Diabetes Database. Annual age- sex-specific was calculated, Poisson regression used analyse by calendar year, month, sex age group at diagnosis. Pandemic era impacts also examined using model adjusted for...

10.1111/dme.15148 article EN Diabetic Medicine 2023-05-16

Spermatogenesis is a complex process in which spermatogonial stem cells differentiate and develop into mature spermatozoa. The transcriptional regulatory network involved fish spermatogenesis remains poorly understood. Here, we demonstrate Nile tilapia that the Sox transcription factor family member Sox30 specifically expressed testes mainly localizes to spermatocytes spermatids. CRISPR/Cas9-mediated sox30 mutation results abnormal spermiogenesis, reduction of sperm motility, male...

10.1016/j.jgg.2021.11.003 article EN cc-by-nc-nd Journal of genetics and genomics/Journal of Genetics and Genomics 2021-11-18
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