Tugba Bagcı-Önder

ORCID: 0000-0003-3646-2613
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Cell death mechanisms and regulation
  • Glioma Diagnosis and Treatment
  • Mitochondrial Function and Pathology
  • Histone Deacetylase Inhibitors Research
  • Epigenetics and DNA Methylation
  • CRISPR and Genetic Engineering
  • RNA Interference and Gene Delivery
  • SARS-CoV-2 and COVID-19 Research
  • Prostate Cancer Treatment and Research
  • Protein Degradation and Inhibitors
  • Advanced biosensing and bioanalysis techniques
  • Cancer, Hypoxia, and Metabolism
  • MicroRNA in disease regulation
  • Cancer Research and Treatments
  • interferon and immune responses
  • Advanced Proteomics Techniques and Applications
  • Autophagy in Disease and Therapy
  • 3D Printing in Biomedical Research
  • Metal complexes synthesis and properties
  • Monoclonal and Polyclonal Antibodies Research
  • Cancer Cells and Metastasis
  • COVID-19 Clinical Research Studies
  • Neurogenesis and neuroplasticity mechanisms
  • Glycosylation and Glycoproteins Research
  • Pluripotent Stem Cells Research

Koç University
2016-2025

Biomed Research Institute
2023

Harvard University
2010-2018

Massachusetts General Hospital
2010-2018

Harvard Stem Cell Institute
2018

Laboratory Imaging (Czechia)
2012

Tufts University
2009-2011

Pfizer (United States)
2011

The resistance of glioma cells to a number antitumor agents and the highly invasive nature that escape primary tumor mass are key impediments eradication tumors in patients. In this study, we evaluated therapeutic efficacy novel PI3-kinase/mTOR inhibitor, PI-103, established lines CD133(+) glioma-initiating explored potential combining PI-103 with stem cell-delivered secretable necrosis factor apoptosis-inducing ligand (S-TRAIL) both vitro orthotopic mouse models gliomas. We show inhibits...

10.1158/0008-5472.can-10-1601 article EN Cancer Research 2010-11-18

The deregulation of the epidermal growth factor receptor (EGFR) has a significant role in progression tumors. Despite development number EGFR-targeting agents that can arrest tumor growth, their success clinic is limited several types, particularly highly malignant glioblastoma multiforme (GBM). In this study, we generated and characterized EGFR-specific nanobodies (ENb) imageable proapoptotic ENb immunoconjugates released from stem cells (SC) to ultimately develop unique EGFR-targeted...

10.1073/pnas.1202832109 article EN Proceedings of the National Academy of Sciences 2012-09-25

High mortality rates of glioblastoma (GBM) patients are partly attributed to the invasive behavior tumor cells that exhibit extensive infiltration into adjacent brain tissue, leading rapid, inevitable, and therapy-resistant recurrence. In this study, we analyzed transcriptome motile (dispersive) non-motile (core) GBM using an in vitro spheroid dispersal model identified SERPINE1 as a modulator cell dispersal. Genetic or pharmacological inhibition reduced adhesion by regulating cell-substrate...

10.3390/cancers11111651 article EN Cancers 2019-10-25

Abstract The development of taxane resistance remains a major challenge for castration resistant prostate cancer (CR-PCa), despite the effectiveness taxanes in prolonging patient survival. To uncover novel targets, we performed an epigenetic drug screen on (docetaxel and cabazitaxel) CR-PCa cells. We identified BRPF reader proteins, along with several groups (CBP/p300, Menin-MLL, PRMT5 SIRT1) that act as targets effectively reversing mediated by ABCB1. Targeting BRPFs specifically resulted...

10.1038/s41419-024-06422-1 article EN cc-by Cell Death and Disease 2024-02-12

3D platforms are important for monitoring tumor progression and screening drug candidates to eradicate tumors such as glioblastoma multiforme (GBM), a malignant type of human brain tumor. Here, new strategy is reported that exploits visible-light-induced crosslinking gelatin where the reaction carried out in absence an additional crosslinker. Visible light-induced promotes design cancer microenvironment-mimetic system without compromising cell viability during process crosslinker facilitates...

10.1002/mabi.201700369 article EN Macromolecular Bioscience 2018-01-15

Enzalutamide is a potent second-generation antiandrogen commonly used to treat hormone-sensitive and castration-resistant prostate cancer (CRPC) patients. While initially effective, the disease almost always develops resistance. Given that many enzalutamide-resistant tumors lack specific somatic mutations, there strong evidence epigenetic factors can cause enzalutamide To explore how resistance arises, we systematically test all modifiers in several models of with custom CRISPR library. From...

10.1038/s42003-024-07413-w article EN cc-by-nc-nd Communications Biology 2025-02-04

Harakiri (HRK) is a BH3-only protein of the Bcl-2 family and regulates apoptosis by interfering with anti-apoptotic Bcl-xL proteins. While its function mainly characterized in nervous system, role tumors ill-defined few studies demonstrating HRK silencing tumors. In this study, we investigated most aggressive primary brain tumor, glioblastoma multiforme (GBM). We showed that differentially expressed among established GBM cell lines overexpression can induce cells at different levels. This...

10.1038/s41420-019-0144-z article EN cc-by Cell Death Discovery 2019-02-08

Abstract Androgen deprivation therapy (ADT) is the standard care for prostate cancer (PCa) patients who fail surgery or radiotherapy. While initially effective, almost always recurs as a more aggressive castration resistant (CRPC). Previous studies have demonstrated that chromatin modifying enzymes can play critical role in conversion to CRPC. However, only handful of these potential pharmacological targets been tested. Therefore, this study, we conducted focused shRNA screen previously...

10.1038/s41388-019-1116-8 article EN cc-by Oncogene 2019-12-10

Small molecule inhibitors have previously been investigated in different studies as possible therapeutics the treatment of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). In current drug repurposing study, we identified leukotriene (D4) receptor antagonist montelukast a novel agent that simultaneously targets two important SARS-CoV-2. We initially demonstrated dual inhibition profile through multiscale molecular modeling studies. Next, characterized its effect on both by vitro...

10.1016/j.ymthe.2021.10.014 article EN cc-by-nc-nd Molecular Therapy 2021-10-22

Glioma, as an aggressive type of cancer, accounts for virtually 80% malignant brain tumors. Despite advances in therapeutic approaches, the long-term survival glioma patients is poor (it usually fatal within 12-14 months). Glioma-on-chip platforms, with continuous perfusion, mimic vivo metabolic functions cancer cells analytical purposes. This offers unprecedented opportunity understanding underlying reasons that arise glioma, determining most effective radiotherapy approach, testing...

10.3390/mi12050490 article EN cc-by Micromachines 2021-04-26

Characterizing clinically relevant brain metastasis models and assessing the therapeutic efficacy in such are fundamental for development of novel therapies metastatic cancers. In this study, we have developed an vivo imageable breast-to-brain mouse model. Using real time imaging subsequent composite fluorescence imaging, show a widespread distribution micro- macro-metastasis different stages progression. We also extravasation tumour cells close association with blood vessels thus mimicking...

10.1093/brain/awv094 article EN Brain 2015-04-23

Overcoming drug resistance is a major challenge for cancer therapy. Tumor necrosis factor α-related apoptosis-inducing ligand (TRAIL) potent therapeutic as an activator of apoptosis, particularly in tumor but not healthy cells. However, its efficacy limited by the cell populations to substance. Here, we have addressed this limitation through development controlled release system, matrix-metalloproteinase (MMP)-sensitive and arg-gly-asp-ser (RGDS) peptide functionalized poly (ethylene-glycol)...

10.1002/mabi.201600267 article EN Macromolecular Bioscience 2016-10-20

Abstract Glioblastoma Multiforme (GBM) is the most common and aggressive primary brain tumor. Despite recent developments in surgery, chemo- radio-therapy, a currently poor prognosis of GBM patients highlights an urgent need for novel treatment strategies. TRAIL (TNF Related Apoptosis Inducing Ligand) potent anti-cancer agent that can induce apoptosis selectively cancer cells. cells frequently develop resistance to which renders clinical application therapeutics inefficient. In this study,...

10.1038/s41419-019-2107-y article EN cc-by Cell Death and Disease 2019-11-26

Abstract Glioma is one of the most malignant types cancer and gliomas remain incurable. One hallmarks glioma its invasiveness. Furthermore, cells tend to readily detach from primary tumor travel through brain tissue, making complete resection impossible in many cases. To expand knowledge regarding invasive behavior glioma, evaluate drug resistance, recapitulate microenvironment, various modeling strategies were proposed last decade, including three-dimensional (3D) biomimetic scaffold-free...

10.1088/2516-1091/ac7833 article EN cc-by Progress in Biomedical Engineering 2022-06-13

Abstract Non‐infectious virus‐like particles (VLPs) are excellent structures for development of many biomedical applications such as drug delivery systems, vaccine production platforms, and detection techniques infectious diseases including SARS‐CoV‐2 VLPs. The characterization biochemical biophysical properties purified VLPs is crucial methods therapeutics. presence spike (S) protein in their structure especially important since S induces immunological response. In this study, a rapid,...

10.1002/biot.202300191 article EN cc-by-nc Biotechnology Journal 2023-09-26

Abstract We developed surface proteome signatures (SPS) for identification of new biomarkers playing a role in cancer drug resistance. SPS compares antigen expression different cell lines by immunocytochemistry phage display antibody library directed to antigens HT1080 fibrosarcoma cells. applied compare the proteomes two epithelial derived lines, MCF7 and NCI/ADR-RES, which is resistant because overexpression P-glycoprotein (P-gp) efflux pump. Surface proteomic profiling identified CD44 as...

10.1158/1541-7786.mcr-09-0237 article EN Molecular Cancer Research 2011-02-26

Abstract Tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) can selectively kill tumor cells. TRAIL resistance in cancers is associated with aberrant expression of the key components apoptotic program. However, how these are regulated at epigenetic level not understood. In this study, we investigated novel mechanisms regulating response glioblastoma multiforme (GBM) cells by a short-hairpin RNA loss-of-function screen. We interrogated 48 genes DNA and histone modification...

10.1038/cddis.2017.288 article EN cc-by Cell Death and Disease 2017-06-29
Coming Soon ...