Jie Chen

ORCID: 0000-0001-9298-4892
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About
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Research Areas
  • Mycorrhizal Fungi and Plant Interactions
  • Plant Pathogens and Fungal Diseases
  • Fungal Biology and Applications
  • Yeasts and Rust Fungi Studies
  • Botanical Research and Applications
  • Plant and Fungal Species Descriptions
  • Lichen and fungal ecology
  • Plant and animal studies
  • Plant Parasitism and Resistance
  • Genomics and Phylogenetic Studies
  • Soil Carbon and Nitrogen Dynamics
  • Plant Stress Responses and Tolerance
  • Plant Diversity and Evolution
  • Plant tissue culture and regeneration
  • Allelopathy and phytotoxic interactions
  • Phytochemicals and Antioxidant Activities
  • Forest Ecology and Biodiversity Studies
  • Microbial Community Ecology and Physiology
  • Biocrusts and Microbial Ecology
  • Entomopathogenic Microorganisms in Pest Control
  • Plant Reproductive Biology
  • Mentoring and Academic Development
  • Forest Insect Ecology and Management
  • Soybean genetics and cultivation
  • Cognitive Abilities and Testing

Southern Medical University
2024

Guangdong Provincial People's Hospital
2024

Chinese Academy of Agricultural Sciences
2022-2024

Guangdong Academy of Medical Sciences
2024

University of Massachusetts Boston
2016-2024

Polytechnic University of Puerto Rico
2024

Forestry Research Institute
2024

Mae Fah Luang University
2012-2023

Nanjing Forestry University
2020-2023

Universidad Politécnica de Pachuca
2023

Hiran A. Ariyawansa Kevin D. Hyde Subashini C. Jayasiri Bart Buyck K. W. Thilini Chethana and 95 more Dong Qin Dai Yu‐Cheng Dai Dinushani A. Daranagama Ruvishika S. Jayawardena Robert Lücking Masoomeh Ghobad‐Nejhad Tuula Niskanen Kasun M. Thambugala Kerstin Voigt Rui-Lin Zhao Guojie Li Mingkwan Doilom Saranyaphat Boonmee Zhu L. Yang Qing Cai Yangyang Cui Ali H. Bahkali Jie Chen Bao‐Kai Cui Jia Jia Chen Monika C. Dayarathne Asha J. Dissanayake Anusha H. Ekanayaka Akira Hashimoto Sinang Hongsanan E. B. Gareth Jones Ellen Larsson Wen Jing Li Qirui Li Jian‐Kui Liu Zong-Long Luo Sajeewa S. N. Maharachchikumbura Ausana Mapook Eric H. C. McKenzie Chada Norphanphoun Sirinapa Konta Ka Lai Pang Rekhani H. Perera Rungtiwa Phookamsak Chayanard Phukhamsakda Umpava Pinruan Émile Randrianjohany Chonticha Singtripop Kazuaki Tanaka Cheng Tian Saowaluck Tibpromma Mohamed A. Abdel‐Wahab Dhanushka N. Wanasinghe Nalin N. Wijayawardene Zhang Jinfeng Huang Zhang Faten A. Abdel-Aziz Mats Wedin Martin Westberg Joseph F. Ammirati Timur S. Bulgakov Diogo Xavier Lima Tony M. Callaghan Philippe Callac Cheng-Hao Chang Luis Fernando Coca Manuela Dal Forno Veronika Dollhofer K. Fliegerová Katrin Greiner Gareth Griffith Hsiao-Man Ho Valérie Hofstetter Rajesh Jeewon Ji Chuan Kang Ting‐Chi Wen Paul M. Kirk Ilkka Kytövuori James D. Lawrey Jia Xing Hong Li Zou Yi Liu Xing Zhong Liu Kare Liimatainen H. Thorsten Lumbsch Misato Matsumura Bibiana Moncada Salilaporn Nuankaew Sittiporn Parnmen André Luiz Cabral Monteiro de Azevedo Santiago Sujinda Sommai Yu Song Carlos Alberto Fragoso de Souza Cristina Maria de Souza‐Motta Hong Su Satinee Suetrong Yong Wang Syuan-Fong Wei Ting‐Chi Wen Hai Sheng Yuan

10.1007/s13225-015-0346-5 article EN Fungal Diversity 2015-11-01
Conrad L. Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali and 95 more László Irinyi Wieland Meyer R. Henrik Nilsson Karen W. Hughes Andrew N. Miller Paul M. Kirk Kessy Abarenkov M. Catherine Aime Hiran A. Ariyawansa Martin I. Bidartondo T. Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo P.W. Crous Ulrike Damm Z. Wilhelm de Beer Bryn T. M. Dentinger Pradeep K. Divakar Margarita Dueñas Nicolas Feau K. Fliegerová Miguel Á. García Z.-W. Ge Gareth Griffith J.Z. Groenewald Marizeth Groenewald M. Grube Marieka Gryzenhout C. Gueidan Liang‐Dong Guo Sarah Hambleton Richard C. Hamelin K. Hansen Valérie Hofstetter Seung‐Beom Hong Jos Houbraken Kevin D. Hyde Patrik Inderbitzin Peter R. Johnston Samantha C. Karunarathna Urmas Kõljalg Gábor M. Kovács Ekaphan Kraichak Krisztina Krizsán Cletus P. Kurtzman Karl‐Henrik Larsson Steven W. Leavitt Peter M. Letcher Kare Liimatainen Jian‐Kui Liu D. J. Lodge Janet Jennifer Luangsa-ard H. Thorsten Lumbsch Sajeewa S. N. Maharachchikumbura Dimuthu S. Manamgoda María P. Martín Andrew M. Minnis Jean Marc Moncalvo Giuseppina Mulè Karen K. Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino‐Bodas Martha J. Powell Huzefa A. Raja Dirk Redecker Jullie M. Sarmiento-Ramírez Keith A. Seifert Bhushan Shrestha Soili Stenroos J. Benjamin Stielow Sung‐Oui Suh Kazuaki Tanaka Leho Tedersoo Ireneia Melo Dhanushka Udayanga Wendy A. Untereiner Javier Diéguez‐Uribeondo Krishna V. Subbarao Csaba Vágvölgyi Cobus M. Visagie Kerstin Voigt D. M. Walker Bevan Weir Michael Weiß Nalin N. Wijayawardene Michael J. Wingfield Min Xu Zuoren Yang Ning Zhang Wen-Ying Zhuang

DNA phylogenetic comparisons have shown that morphology-based species recognition often underestimates fungal diversity. Therefore, the need for accurate sequence data, tied to both correct taxonomic names and clearly annotated specimen has never been greater. Furthermore, growing number of molecular ecology microbiome projects using high-throughput sequencing require fast effective methods en masse assignments. In this article, we focus on selecting re-annotating a set marker reference...

10.1093/database/bau061 article EN cc-by Database 2014-06-30

10.1007/s13225-015-0324-y article EN Fungal Diversity 2015-05-01
Kevin D. Hyde Danushka S. Tennakoon Rajesh Jeewon D. Jayarama Bhat Sajeewa S. N. Maharachchikumbura and 95 more Walter Rossi Marco Leonardi Hyang Burm Lee Hye Yeon Mun Jos Houbraken Thuong T. T. Nguyen Sun Jeong Jeon Jens C. Frisvad Dhanushka N. Wanasinghe Robert Lücking André Aptroot Marcela E. S. Cáceres Samantha C. Karunarathna Sinang Hongsanan Rungtiwa Phookamsak Nimali I. de Silva Kasun M. Thambugala Ruvishika S. Jayawardena Indunil C. Senanayake Saranyaphat Boonmee Jie Chen Zong-Long Luo Chayanard Phukhamsakda Olinto Liparini Pereira Vanessa Pereira de Abreu André Wilson Campos Rosado Buyck Bart Émile Randrianjohany Valérie Hofstetter Tatiana Baptista Gibertoni A.M. Soares Helio Longoni Plautz Helen Maria Pontes Sotão William Kalhy Silva Xavier Jadson Diogo Pereira Bezerra Thays Gabrielle Lins de Oliveira Cristina Maria de Souza‐Motta Oliane Maria Correia Magalhães Digvijayini Bundhun Dulanjalee Harishchandra Ishara S. Manawasinghe Wei Dong Shengnan Zhang Dan-Feng Bao Milan C. Samarakoon Dhandevi Pem Anuruddha Karunarathna Chuan-Gen Lin Jing Yang Rekhani H. Perera Vinit Kumar Shi-Ke Huang Monika C. Dayarathne Anusha H. Ekanayaka Subashini C. Jayasiri Yuan-Pin Xiao Sirinapa Konta Tuula Niskanen Kare Liimatainen Yu-Cheng Dai Xiao-Hong Ji Xue-Mei Tian Armin Mešić Sanjay K. Singh Kunthida Phutthacharoen Lei Cai Touny Sorvongxay Vinodhini Thiyagaraja Chada Norphanphoun Napalai Chaiwan Yong‐Zhong Lu Hong-Bo Jiang Jin-Feng Zhang Pranami D. Abeywickrama Janith V. S. Aluthmuhandiram Rashika S. Brahmanage Ming Zeng K. W. Thilini Chethana De-Ping Wei Martina Réblová Jacques Fournier Jana Nekvindová Renan do Nascimento Barbosa José Ewerton Felinto dos Santos Neiva Tinti de Oliveira Guojie Li Damien Ertz Qiu-Ju Shang Alan J. L. Phillips CHANG-HSIN KUO Erio Camporesi Timur S. Bulgakov Saisamorn Lumyong E. B. Gareth Jones Putarak Chomnunti

10.1007/s13225-019-00429-2 article EN Fungal Diversity 2019-05-01

The identification and quantitation of the anthocyanins in 12 purple-fleshed sweet potato (PFSP) cultivars ('Jihei 1', 'Xuzi 3', 6', 'Zhezi 4', 'Ningzi 2', 'Ning 2-2', 6-8', 'Guangzi 'Ziluolan', 'Qinzi 1') China were carried out using a combination ultraperformance liquid chromatography-photodiode array (UPLC-PDA), quadrupole-time-of-flight mass spectrometry (QTOF-MS), tandem (MS/MS) analyses. Thirteen acylated tentatively characterized, including two new PFSP anthocyanins, cyanidin...

10.1021/acs.jafc.5b04878 article EN Journal of Agricultural and Food Chemistry 2015-12-20

This study examined the associations of two measures vision impairment (i.e., a clinical measure visual acuity and self-reported status) social isolation in nationally representative sample Americans aged 60 older.Five cycles National Health Nutrition Examination Survey (NHANES IV; 1999-2008) were used to estimate successive logistic regression models, holding constant demographic characteristics, chronic illness, functional limitations, disability.Effects both predicting substantially...

10.1177/0898264315624909 article EN Journal of Aging and Health 2016-01-14
Juan Carlos Zamora Måns Svensson Roland Kirschner Ibai Olariaga Svengunnar Ryman and 95 more Luis A. Parra József Geml Anna Rosling Slavomír Adamčík Teuvo Ahtı M. Catherine Aime A. Martyn Ainsworth László Albert Edgardo Albertó A. Altés Dmitry Ageev Reinhard Agerer Begoña Aguirre-Hudson Joe Ammirati Harry Andersson Claudio Angelini Vladimír Antonín Takayuki Aoki André Aptroot Didier Argaud Blanca Imelda Arguello Sosa A. Aronsen Ulf Arup Bita Asgari Boris Assyov Violeta Atienza Ditte Bandini J. L. Baptista-Ferreira Hans-Otto Baral Tim Baroni Robert W. Barreto Henry J. Beker A.R. Bell Jean‐Michel Bellanger Francesco Bellù Martin Bemmann Mika Bendiksby Egil Bendiksen Katriina Bendiksen Lajos Benedek Anna Bérešová-Guttová Franz Berger Reinhard Berndt Annarosa Bernicchia Alona Yu. Biketova Enrico Bizio Curtis R. Björk Teun Boekhout David Boertmann Tanja Böhning Florent Boittin Carlos G. Boluda Menno W. Boomsluiter Jan Borovička Tor Erik Brandrud Uwe Braun Irwin M. Brodo Tatiana Bulyonkova Harold H. Burdsall Bart Buyck Ana Rosa Burgaz Vicent Calatayud Philippe Callac Emanuele Campo Massimo Candusso B Capoen Joaquim Carbó Matteo Carbone Rafael F. Castañeda-Ruíz Michael A. Castellano Jie Chen Philippe Clerc Giovanni Consiglio Gilles Corriol Régis Courtecuisse Ana Crespo Cathy L. Cripps P.W. Crous Gladstone Alves da Silva Meiriele da Silva Marjo Dam Nico Dam Frank Dämmrich Kanad Das Linda Davies Eske De Crop André De Kesel R. D. Lange Bárbara De Madrignac Bonzi Thomas Edison E. dela Cruz Lynn Delgat V. Demoulin Dennis E. Desjardin Paul Diederich Bálint Dima

Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify diversity) with nomenclature name diversity). Two proposals amend International Code Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region extent) serve as taxon names voucherless fungi (mainly putative taxa from...

10.5598/imafungus.2018.09.01.10 article EN cc-by IMA Fungus 2018-05-24

Within Agaricus subg. Minores , A. sect. remains a little-studied section due generally to its delicate sporocarps often lacking taxonomically relevant morphological characters. To reconstruct the section, using recent taxonomic system based on divergence times, and evaluate species diversity of in Greater Mekong Subregion, 165 specimens were incorporated phylogenetic analyses. A dated tree nuclear ITS, LSU tef1-α sequence data allowed us better circumscribe propose new subgenus, Minoriopsis...

10.3767/003158517x695521 article EN Persoonia - Molecular Phylogeny and Evolution of Fungi 2017-04-29

Pine wilt disease (PWD), a worldwide threat to pine forests, has caused tremendous damage conifer forest in the world. However, little research been conducted on relationship between symbiosis functions of root associated fungi and disease. In this study, we assessed influence seven ectomycorrhizal (ECMF) five dark septate endophytic (DSE) growth traits morphology as well correlation these parameters cumulative mortality morbidity rates Pinus tabulaeformis Carr.showed lowest rates. We...

10.3390/f10020140 article EN Forests 2019-02-08

Parenting behaviors may be influenced by multiple factors, including parental values, beliefs, socialization goals, and children’s characteristics (e.g., personality, age). This study examined relations between Chinese mothers’ collectivism goals “training” beliefs their parenting styles with children (youth ages 9-17 years), using structural equation modeling (SEM). In addition, in an exploratory manner, the associations youth’s age were also explored. all, 652 youth (female 46.2% male...

10.1177/0022022118822046 article EN Journal of Cross-Cultural Psychology 2019-01-04

Field collections of Agaricus were collected in the Dominican Republic from 2009–2016 with intent to evaluate diversity this genus, which was quasi-unknown country. In same period, studies on tropical revealed clades that remained unclassified. A new taxonomic system classification developed, aim, inter alia, integrate such clades. recent phylogenetic study, included some samples Republic, they belonged three putative sections. Our objective paper is describe species country and classify...

10.11646/phytotaxa.345.3.2 article EN Phytotaxa 2018-03-27

Soil aggregates provide different ecological niches for microorganisms, and in turn, the microbial interactions affect soil aggregation process. The response of community bulk to fertilization regimes has been well studied; however, co-occurrence patterns bacteria fungi under various remain unclear. Based on long-term field experiment, we found that contributed more fungal than bacterial composition. Long-term decreased large macroaggregates (LM), (MA) silt clay (SC) fractions, but increased...

10.3389/fmicb.2022.824681 article EN cc-by Frontiers in Microbiology 2022-03-22

Osteoporosis is characterized by low bone mass and deterioration of tissue, which influenced both environmental factors nutritional metabolism. The relationship between biochemical indicators mineral density (BMD) intricate involves complex mechanisms. Path analysis, a statistical method that investigates causal relationships the strength associations among multiple factors, can be valuable in elucidating connection BMD. In this study, we employed advanced techniques, specifically structural...

10.1016/j.exger.2024.112392 article EN cc-by Experimental Gerontology 2024-03-05

The genus Agaricus is known for its medicinal and edible species but also includes toxic that belong to section Xanthodermatei. Previous phylogenetic reconstruction temperate species, based on sequence data of nuc rRNA gene (rDNA) internal transcribed spacers (ITS), has revealed two major groups in this a possible third lineage A. pseudopratensis. Recent research shown classifications need improving with the addition tropical taxa. In study we add new collections We describe three from made...

10.3852/14-076 article EN Mycologia 2014-11-01

Agaricus is a genus of saprobic basidiomycetes including species nutritional and medicinal interest. Historically the temperate have been grouped into eight classical sections. Recent phylogenetic analyses however, revealed that two-thirds tropical taxa do not cluster in these sections, but form exclusively clades. Seven (TR I to TR VII) strongly supported clades it was hypothesized clade might represent section Brunneopicti. This initially characterized by presence punctiform squamules,...

10.11646/phytotaxa.192.3.2 article EN Phytotaxa 2015-01-13

Agaricus section Minores contains the richest species diversity within genus. Its Phylogeny is firstly presented by a Maximum Likelihood tree generated through DNA sequences from four gene regions of 91 species. Furthermore, molecular dating analysis conducted used those sequences, and it provided divergence times clades Minores. Study showed has tropical origin. Four main dispersal routes are proposed: (1) South Asia migrated Tibetan Plateau reached Europe ca. 9-13 Ma; (2) out dispersed to...

10.1038/s41598-017-05203-5 article EN cc-by Scientific Reports 2017-07-05
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