Guojie Li

ORCID: 0000-0003-1815-692X
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Research Areas
  • Mycorrhizal Fungi and Plant Interactions
  • Lichen and fungal ecology
  • Plant Pathogens and Fungal Diseases
  • Fungal Biology and Applications
  • T-cell and Retrovirus Studies
  • Lymphoma Diagnosis and Treatment
  • Yeasts and Rust Fungi Studies
  • Distributed and Parallel Computing Systems
  • Caveolin-1 and cellular processes
  • Cloud Computing and Resource Management
  • Cassava research and cyanide
  • Parallel Computing and Optimization Techniques
  • Marine and coastal plant biology
  • Urinary Tract Infections Management
  • Big Data and Business Intelligence
  • Big Data Technologies and Applications
  • Musculoskeletal pain and rehabilitation
  • Chromosomal and Genetic Variations
  • Information Technology Governance and Strategy
  • Soil Mechanics and Vehicle Dynamics
  • Immune Cell Function and Interaction
  • Agricultural Engineering and Mechanization
  • Genetic factors in colorectal cancer
  • Smart Agriculture and AI
  • Genomics and Phylogenetic Studies

Hebei Agricultural University
2021-2024

Duke University
2005-2024

Ministry of Agriculture and Rural Affairs
2022-2024

Chinese Academy of Tropical Agricultural Sciences
2022-2024

Hospital of Hebei Province
2024

Innovation Team (China)
2023-2024

Chinese Academy of Sciences
2009-2023

Institute of Computing Technology
2001-2023

Shenzhen University
2023

Vision Technology (United States)
2023

We have produced a draft sequence of the rice genome for most widely cultivated subspecies in China, Oryza sativa L. ssp. indica , by whole-genome shotgun sequencing. The was 466 megabases size, with an estimated 46,022 to 55,615 genes. Functional coverage assembled sequences 92.0%. About 42.2% exact 20-nucleotide oligomer repeats, and transposons were intergenic regions between Although 80.6% predicted Arabidopsis thaliana genes had homolog rice, only 49.4% A. . large proportion no...

10.1126/science.1068037 article EN Science 2002-04-05
Hiran A. Ariyawansa Kevin D. Hyde Subashini C. Jayasiri Bart Buyck K. W. Thilini Chethana and 95 more Dong Qin Dai Yu‐Cheng Dai Dinushani A. Daranagama Ruvishika S. Jayawardena Robert Lücking Masoomeh Ghobad‐Nejhad Tuula Niskanen Kasun M. Thambugala Kerstin Voigt Rui-Lin Zhao Guojie Li Mingkwan Doilom Saranyaphat Boonmee Zhu L. Yang Qing Cai Yangyang Cui Ali H. Bahkali Jie Chen Bao‐Kai Cui Jia Jia Chen Monika C. Dayarathne Asha J. Dissanayake Anusha H. Ekanayaka Akira Hashimoto Sinang Hongsanan E. B. Gareth Jones Ellen Larsson Wen Jing Li Qirui Li Jian‐Kui Liu Zong-Long Luo Sajeewa S. N. Maharachchikumbura Ausana Mapook Eric H. C. McKenzie Chada Norphanphoun Sirinapa Konta Ka Lai Pang Rekhani H. Perera Rungtiwa Phookamsak Chayanard Phukhamsakda Umpava Pinruan Émile Randrianjohany Chonticha Singtripop Kazuaki Tanaka Cheng Tian Saowaluck Tibpromma Mohamed A. Abdel‐Wahab Dhanushka N. Wanasinghe Nalin N. Wijayawardene Zhang Jinfeng Huang Zhang Faten A. Abdel-Aziz Mats Wedin Martin Westberg Joseph F. Ammirati Timur S. Bulgakov Diogo Xavier Lima Tony M. Callaghan Philippe Callac Cheng-Hao Chang Luis Fernando Coca Manuela Dal Forno Veronika Dollhofer K. Fliegerová Katrin Greiner Gareth Griffith Hsiao-Man Ho Valérie Hofstetter Rajesh Jeewon Ji Chuan Kang Ting‐Chi Wen Paul M. Kirk Ilkka Kytövuori James D. Lawrey Jia Xing Hong Li Zou Yi Liu Xing Zhong Liu Kare Liimatainen H. Thorsten Lumbsch Misato Matsumura Bibiana Moncada Salilaporn Nuankaew Sittiporn Parnmen André Luiz Cabral Monteiro de Azevedo Santiago Sujinda Sommai Yu Song Carlos Alberto Fragoso de Souza Cristina Maria de Souza‐Motta Hong Su Satinee Suetrong Yong Wang Syuan-Fong Wei Ting‐Chi Wen Hai Sheng Yuan

10.1007/s13225-015-0346-5 article EN Fungal Diversity 2015-11-01

Abstract The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to Ascomycota. present work provides an overview all validly published, currently used basidiomycete genera date single document. An outline provided, which includes 1928 names, with 1263 synonyms, are distributed 241 families, 68 orders, 18 classes four subphyla. We provide brief notes for each accepted genus including information on classification, number species, type life mode,...

10.1007/s13225-019-00435-4 article EN cc-by Fungal Diversity 2019-11-01
Kevin D. Hyde Danushka S. Tennakoon Rajesh Jeewon D. Jayarama Bhat Sajeewa S. N. Maharachchikumbura and 95 more Walter Rossi Marco Leonardi Hyang Burm Lee Hye Yeon Mun Jos Houbraken Thuong T. T. Nguyen Sun Jeong Jeon Jens C. Frisvad Dhanushka N. Wanasinghe Robert Lücking André Aptroot Marcela E. S. Cáceres Samantha C. Karunarathna Sinang Hongsanan Rungtiwa Phookamsak Nimali I. de Silva Kasun M. Thambugala Ruvishika S. Jayawardena Indunil C. Senanayake Saranyaphat Boonmee Jie Chen Zong-Long Luo Chayanard Phukhamsakda Olinto Liparini Pereira Vanessa Pereira de Abreu André Wilson Campos Rosado Buyck Bart Émile Randrianjohany Valérie Hofstetter Tatiana Baptista Gibertoni A.M. Soares Helio Longoni Plautz Helen Maria Pontes Sotão William Kalhy Silva Xavier Jadson Diogo Pereira Bezerra Thays Gabrielle Lins de Oliveira Cristina Maria de Souza‐Motta Oliane Maria Correia Magalhães Digvijayini Bundhun Dulanjalee Harishchandra Ishara S. Manawasinghe Wei Dong Shengnan Zhang Dan-Feng Bao Milan C. Samarakoon Dhandevi Pem Anuruddha Karunarathna Chuan-Gen Lin Jing Yang Rekhani H. Perera Vinit Kumar Shi-Ke Huang Monika C. Dayarathne Anusha H. Ekanayaka Subashini C. Jayasiri Yuan-Pin Xiao Sirinapa Konta Tuula Niskanen Kare Liimatainen Yu-Cheng Dai Xiao-Hong Ji Xue-Mei Tian Armin Mešić Sanjay K. Singh Kunthida Phutthacharoen Lei Cai Touny Sorvongxay Vinodhini Thiyagaraja Chada Norphanphoun Napalai Chaiwan Yong‐Zhong Lu Hong-Bo Jiang Jin-Feng Zhang Pranami D. Abeywickrama Janith V. S. Aluthmuhandiram Rashika S. Brahmanage Ming Zeng K. W. Thilini Chethana De-Ping Wei Martina Réblová Jacques Fournier Jana Nekvindová Renan do Nascimento Barbosa José Ewerton Felinto dos Santos Neiva Tinti de Oliveira Guojie Li Damien Ertz Qiu-Ju Shang Alan J. L. Phillips CHANG-HSIN KUO Erio Camporesi Timur S. Bulgakov Saisamorn Lumyong E. B. Gareth Jones Putarak Chomnunti

10.1007/s13225-019-00429-2 article EN Fungal Diversity 2019-05-01

Abstract Hepatosplenic T-cell lymphoma (HSTL) is a rare and lethal lymphoma; the genetic drivers of this disease are unknown. Through whole-exome sequencing 68 HSTLs, we define recurrently mutated driver genes copy-number alterations in disease. Chromatin-modifying genes, including SETD2, INO80, ARID1B, were commonly HSTL, affecting 62% cases. HSTLs manifest frequent mutations STAT5B (31%), STAT3 (9%), PIK3CD for which there currently exist potential targeted therapies. In addition, noted...

10.1158/2159-8290.cd-16-0330 article EN Cancer Discovery 2017-01-26
Saranyaphat Boonmee Dhanushka N. Wanasinghe Mark S. Calabon Naruemon Huanraluek S Chandrasiri and 95 more Gareth E. Jones Walter Rossi Marco Leonardi Sanjay K. Singh Shiwali Rana Paras Nath Singh Deepak Kumar Maurya Ajay C. Lagashetti Deepika Choudhary Yu‐Cheng Dai Chang‐Lin Zhao Yan-Hong Mu Hai‐Sheng Yuan Shuang‐Hui He Rungtiwa Phookamsak Hong-Bo Jiang María P. Martín Margarita Dueñas M. Teresa Tellería Izabela Kałucka Andrzej M. Jagodziński Kare Liimatainen Diana S. Pereira Alan J. L. Phillips Nakarin Suwannarach Jaturong Kumla Surapong Khuna Saisamorn Lumyong Tarynn B. Potter Roger G. Shivas Adam Sparks Niloofar Vaghefi Mohamed A. Abdel‐Wahab Faten A. Abdel-Aziz Guojie Li Wen-Fei Lin Upendra Singh R. P. Bhatt Hyang Burm Lee Thuong T. T. Nguyen Paul M. Kirk Arun Kumar Dutta Krishnendu Acharya V. Venkateswara Sarma M Niranjan Kunhiraman C. Rajeshkumar Nikhil Ashtekar Sneha S. Lad Nalin N. Wijayawardene Darbe J. Bhat Rong-Ju Xu Subodini N. Wijesinghe H. F. Shen Zong-Long Luo Jingyi Zhang Phongeun Sysouphanthong Naritsada Thongklang Dan-Feng Bao Janith V. S. Aluthmuhandiram Jafar Abdollahzadeh Alireza Javadi Francesco Dovana Muhammad Usman Abdul Nasir Khalid Asha J. Dissanayake Anusha Telagathoti Maraike Probst Ursula Peintner Isaac Garrido‐Benavent Lilla Bóna Zsolt Merényi Lajos Boros Zoltán Bratek J. Benjamin Stielow Ning Jiang Chengming Tian E. Shams Farzaneh Dehghanizadeh A. Pordel M. Javan‒Nikkhah Teodor T. Denchev Cvetomir M. Denchev Martin Kemler Dominik Begerow Chun-Ying Deng Emma Harrower Tohir A. Bozorov Tutigul Kholmuradova Yusufjon Gafforov Aziz Abdurazakov Jianchu Xu Peter E. Mortimer Guang-Cong Ren Rajesh Jeewon Sajeewa S. N. Maharachchikumbura

10.1007/s13225-021-00489-3 article EN Fungal Diversity 2021-11-01

Two coding variants of apolipoprotein L1 (APOL1) called G1 and G2 explain much the excess risk kidney disease in African Americans. While various cytotoxic phenotypes have been reported experimental models, proximal mechanism by which cause is poorly understood. Here, we leveraged three models a recently small molecule blocker APOL1 protein, VX-147, to identify upstream G1-induced cytotoxicity. In HEK293 cells, demonstrated that G1-mediated Na+ import/K+ efflux triggered activation G...

10.1172/jci172262 article EN cc-by Journal of Clinical Investigation 2024-01-16

10.1007/s13225-024-00535-w article EN Fungal Diversity 2024-07-09

Type 1 fimbriated Escherichia coli represents the most common human uropathogen, owing much of its virulence to invasion uroepithelium, which is highly impermeable due preponderance uroplakins and ordered lipid components. We sought elucidate molecular basis for E. bladder epithelium by employing 5637 epithelial cells, we found following: (i) intracellular associated with caveolae raft components; (ii) RNAi reduction caveolin-1 expression inhibited bacterial invasion; (iii) a signaling...

10.1074/jbc.m400769200 article EN cc-by Journal of Biological Chemistry 2004-04-01

Uropathogenic Escherichia coli invade bladder epithelial cells (BECs) by direct entry into specialized cAMP regulated exocytic compartments. Remarkably, a significant number of these intracellular bacteria are subsequently expelled in nonlytic and piecemeal fashion infected BECs. Here, we report that expulsion E. BECs is initiated the pattern recognition receptor, Toll-like receptor (TLR)4, after activation LPS. Also, reveal caveolin-1, Rab27b, PKA, MyRIP components compartment, they form...

10.1073/pnas.0900527106 article EN Proceedings of the National Academy of Sciences 2009-08-18

Russula fanjing is proposed here as a new species based on morphological and molecular evidence. The described illustrated with photographs line drawings compared to related species. Morphologically, R. (subgenus Russula, section subsection Russula) characterized by medium-sized basidioma, vivid red pastel areolate pileus, white lamellae occasionally forked near the stipe lamellulae, smooth stipe, basidiospores ornamented strongly amyloid warts ridges interconnected fine lines in an...

10.11646/phytotaxa.480.2.3 article EN Phytotaxa 2021-01-20

Four new species of Russula subsection Sardoninae from northern and southwestern China under coniferous deciduous trees are proposed as R. begonia, photinia, rhodochroa, rufa. Illustrations descriptions gracillima, leucomarginata, roseola, the above four provided based on evidence morphological characters phylogenetic analyses internal transcribed spacer (ITS), well multi-locus mtSSU, nLSU, rpb1, rpb2 tef1-α. The relationships between these allied taxa discussed.

10.3390/jof9020199 article EN cc-by Journal of Fungi 2023-02-03

Pseudomonas aeruginosa has the capacity to invade lung epithelial cells by co-opting intrinsic endocytic properties of lipid rafts, which are rich in cholesterol, sphingolipids, and proteins, such as caveolin-1 -2. We compared intratracheal infection wild type caveolin-deficient mice investigate role caveolin proteins pathogenesis pneumonia. Unlike mice, succumb pneumonia, resistant Pseudomonas. observed that invasion is dependent on caveolin-2 but not caveolin-1. Phosphorylation Src family...

10.1074/jbc.m808629200 article EN cc-by Journal of Biological Chemistry 2009-02-12

The Russula globispora lineage is a morphologically and phylogenetically well-defined group of ectomycorrhizal fungi occurring in various climatic areas. In this study we performed multi-locus phylogenetic based on collections from boreal, alpine arctic habitats Europe Western North America, subalpine the southeast Himalayas subtropical coniferous forests Pakistan. European American are nearly identical probably represent single species named R. dryadicola distributed Alps to Rocky...

10.1186/s43008-019-0003-9 article EN cc-by IMA Fungus 2019-06-07

Three new species of Russulasection Ingratae, found in Guizhou and Jiangsu Provinces, southern China, are proposed: R.straminella, R.subpectinatoides R.succinea. Photographs, line drawings detailed morphological descriptions for these provided with comparisons against closely-related taxa. Phylogenetic analysis the internal transcribed spacer (ITS) region supported recognition specimens as species. Additionally, R.indocatillus is reported first time from China phylogenetic data Chinese specimens.

10.3897/mycokeys.84.68750 article EN cc-by MycoKeys 2021-11-08
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