Yasuko Orba

ORCID: 0000-0001-9910-3912
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About
Contact & Profiles
Research Areas
  • Mosquito-borne diseases and control
  • Viral Infections and Vectors
  • SARS-CoV-2 and COVID-19 Research
  • Viral gastroenteritis research and epidemiology
  • Animal Virus Infections Studies
  • Polyomavirus and related diseases
  • Plant Virus Research Studies
  • Viral Infections and Outbreaks Research
  • Full-Duplex Wireless Communications
  • Virology and Viral Diseases
  • Vector-Borne Animal Diseases
  • COVID-19 Clinical Research Studies
  • Rabies epidemiology and control
  • Respiratory viral infections research
  • Viral Infections and Immunology Research
  • Virus-based gene therapy research
  • Malaria Research and Control
  • Insect symbiosis and bacterial influences
  • HIV Research and Treatment
  • Computational Drug Discovery Methods
  • Antenna Design and Analysis
  • Herpesvirus Infections and Treatments
  • SARS-CoV-2 detection and testing
  • Animal Disease Management and Epidemiology
  • Bacteriophages and microbial interactions

Hokkaido University
2016-2025

Sapporo University
2023-2024

Health Sciences University of Hokkaido
2023-2024

University of Miyazaki
2022

Centers for Disease Control and Prevention
2020

University of Zambia
2015-2020

Lusaka Apex Medical University
2020

Ministry of Agriculture and Livestock
2020

University of Edinburgh
2020

University of Florida
2020

Abstract The emergence of the Omicron variant SARS-CoV-2 is an urgent global health concern 1 . In this study, our statistical modelling suggests that has spread more rapidly than Delta in several countries including South Africa. Cell culture experiments showed to be less fusogenic and ancestral strain SARS-CoV-2. Although spike (S) protein efficiently cleaved into two subunits, which facilitates cell–cell fusion 2,3 , S was compared proteins Furthermore, a hamster model, decreased lung...

10.1038/s41586-022-04462-1 article EN cc-by Nature 2022-02-01

This paper demonstrates how the shape and size of gold nanoparticles (AuNPs) affect immunological responses in vivo vitro for production antibodies West Nile virus (WNV). We prepared spherical (20 40 nm diameter), rod (40 × 10 nm), cubic nm) AuNPs as adjuvants coated them with WNV envelope (E) protein. measured anti-WNVE after inoculation these WNVE-coated (AuNP-Es) into mice. The AuNP-Es (Sphere40-Es) induced highest level WNVE-specific antibodies, while (Rod-Es) only 50% that Sphere40-E....

10.1021/nn3057005 article EN ACS Nano 2013-04-30

The coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute respiratory syndrome 2 (SARS-CoV-2), has resulted in millions of deaths and threatens public health safety. Despite the rapid global spread COVID-19 vaccines, effective oral antiviral drugs are urgently needed. Here, we describe discovery S-217622, first noncovalent, nonpeptidic SARS-CoV-2 3CL protease inhibitor clinical candidate. S-217622 was discovered via virtual screening followed biological an in-house compound...

10.1021/acs.jmedchem.2c00117 article EN cc-by Journal of Medicinal Chemistry 2022-03-30

Soon after the emergence and global spread of SARS-CoV-2 Omicron lineage BA.1, another lineage, BA.2, began outcompeting BA.1. The results statistical analysis showed that effective reproduction number BA.2 is 1.4-fold higher than Neutralization experiments revealed immunity induced by COVID vaccines widely administered to human populations not against similar antigenicity notably different from Cell culture spike confers replication efficacy in nasal epithelial cells more efficient...

10.1016/j.cell.2022.04.035 article EN cc-by Cell 2022-05-02

The bioactive lysophospholipid mediator sphingosine-1-phosphate (S1P) promotes the egress of newly formed T cells from thymus and release immature B bone marrow. It has remained unclear, however, where how S1P is released. Here, we show that in mice, transporter spinster homolog 2 (Spns2) responsible for mature marrow, respectively. Global Spns2-KO mice exhibited marked accumulation thymi decreased numbers peripheral blood secondary lymphoid organs. Mature recirculating were reduced...

10.1172/jci60746 article EN Journal of Clinical Investigation 2012-03-12

The spike (S) protein of Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2) binds to a host cell receptor which facilitates viral entry. A polybasic motif detected at the cleavage site S has been shown broaden tropism and transmissibility virus. Here we examine properties SARS-CoV-2 variants with mutations that undergo inefficient proteolytic cleavage. Virus gene generated smaller plaques exhibited more limited range compared wild-type strain. These alterations were result from...

10.1371/journal.ppat.1009233 article EN cc-by PLoS Pathogens 2021-01-21

Abstract The MHC class I-mediated antigen presentation pathway plays a critical role in antiviral immunity. Here we show that the I is targeted by SARS-CoV-2. Analysis of gene expression profile from COVID-19 patients as well SARS-CoV-2 infected epithelial cell lines reveals induction inhibited infection. We NLRC5, an transactivator, suppressed both transcriptionally and functionally ORF6 protein, providing mechanistic link. hampers type II interferon-mediated STAT1 signaling, resulting...

10.1038/s41467-021-26910-8 article EN cc-by Nature Communications 2021-11-15

In parallel with vaccination, oral antiviral agents are highly anticipated to act as countermeasures for the treatment of coronavirus disease 2019 (COVID-19) pandemic caused by severe acute respiratory syndrome 2 (SARS-CoV-2). Oral medication demands not only high activity but also target specificity, favorable bioavailability, and metabolic stability. Although a large number compounds have been identified potential inhibitors SARS-CoV-2 infection in vitro, few proven be effective vivo....

10.1126/scitranslmed.abq4064 article EN cc-by Science Translational Medicine 2022-11-03

OBJECTIVE—Adipose tissue serves as an integrator of various physiological pathways, energy balance, and glucose homeostasis. Forkhead box–containing protein O subfamily (FoxO) 1 mediates insulin action at the transcriptional level. However, roles FoxO1 in adipose remain unclear. RESEARCH DESIGN AND METHODS—In present study, we generated tissue–specific transgenic mice (adipocyte 2 [aP2]-FLAG-Δ256) using aP2 promoter/enhancer a mutant (FLAGΔ256) which carboxyl terminal transactivation domain...

10.2337/db07-0698 article EN Diabetes 2007-12-28

Virus infections can result in a range of cellular injuries and commonly this involves both the plasma intracellular membranes, resulting enhanced permeability. Viroporins are group proteins that interact with membranes modifying permeability promote release viral particles. While these not essential for virus replication, their activity certainly promotes growth. Progressive multifocal leukoencephalopathy (PML) is fatal demyelinating disease from lytic infection oligodendrocytes by...

10.1371/journal.ppat.1000801 article EN cc-by PLoS Pathogens 2010-03-11

Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) utilizes host proteases, including a plasma membrane-associated transmembrane protease, serine 2 (TMPRSS2) to cleave and activate the virus spike protein facilitate cellular entry. Although TMPRSS2 is well-characterized type II protease (TTSP), role of other TTSPs on replication SARS-CoV-2 remains be elucidated. Here, we have screened 12 using human angiotensin-converting enzyme 2-expressing HEK293T (293T-ACE2) cells Vero E6...

10.3390/v13030384 article EN cc-by Viruses 2021-02-28

Abstract The increasing burden of tick-borne orthonairovirus infections, such as Crimean-Congo hemorrhagic fever, is becoming a global concern for public health. In the present study, we identify novel orthonairovirus, designated Yezo virus (YEZV), from two patients showing acute febrile illness with thrombocytopenia and leukopenia after tick bite in Hokkaido, Japan, 2019 2020, respectively. YEZV phylogenetically grouped Sulina detected Ixodes ricinus ticks Romania. infection has been...

10.1038/s41467-021-25857-0 article EN cc-by Nature Communications 2021-09-20

Abstract Soon after the emergence and global spread of a new severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron lineage, BA.1 (ref 1, ), another BA.2, has initiated outcompeting BA.1. Statistical analysis shows that effective reproduction number BA.2 is 1.4-fold higher than Neutralisation experiments show vaccine-induced humoral immunity fails to function against like BA.1, notably, antigenicity different from Cell culture more replicative in human nasal epithelial cells...

10.1101/2022.02.14.480335 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-02-15

Potent neutralizing SARS-CoV-2 antibodies often target the spike protein receptor-binding site (RBS), but variability of RBS epitopes hampers broad neutralization multiple sarbecoviruses and drifted viruses. Here, using humanized mice, we identified an antibody with a germline VH gene that potently neutralized SARS-related coronaviruses, including SARS-CoV variants. X-ray crystallography revealed coordinated recognition by heavy chain non-RBS conserved sites light binding angle mimicking...

10.1016/j.immuni.2021.08.025 article EN cc-by Immunity 2021-08-24

The pathogenesis of clinical manifestations caused by newly emerging tick-borne phleboviruses [i.e., Severe fever with thrombocytopenia syndrome virus (SFTSV) and Heartland (HRTV)], such as severe lymphocytopenia, are not yet fully understood. In the present study, to establish an animal model mimicking profile fatal human cases, we examined susceptibilities adult mice from 12 strains, aged two cynomolgus macaques SFTSV and/or HRTV infections. However, none these immunocompetent animals...

10.3389/fmicb.2017.00104 article EN cc-by Frontiers in Microbiology 2017-01-30

Rabies virus (RABV) is the causative agent of fatal neurological disease. Cellular attachment initial and essential step for viral infections. Although extensive studies have demonstrated that RABV uses various target cell molecules to mediate infection, no specific molecule has been identified as an factor infection. Here we demonstrate cellular heparan sulfate (HS) supports adhesion subsequent entry into cells. Enzymatic removal HS reduced susceptibility heparin, a highly sulfated form HS,...

10.1093/infdis/jiy081 article EN The Journal of Infectious Diseases 2018-02-23

The coronavirus disease 2019 (COVID-19) pandemic has necessitated the development of antiviral agents against severe acute respiratory syndrome 2 (SARS-CoV-2). 3C-like protease (3CLpro) is a promising target for COVID-19 treatment. Here, we report new class covalent inhibitors 3CLpro that possess chlorofluoroacetamide (CFA) as cysteine-reactive warhead. Based on an aza-peptide scaffold, synthesized series CFA derivatives in enantiopure form and evaluated their biochemical efficiency. data...

10.1021/acs.jmedchem.2c01081 article EN Journal of Medicinal Chemistry 2022-10-13

Abstract The coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute respiratory syndrome 2 (SARS-CoV-2), has resulted in millions of deaths and threatens public health safety. Despite the rapid global spread COVID-19 vaccines, effective oral antiviral drugs are urgently needed. Here, we describe discovery S-217622, first non-covalent, non-peptidic SARS-CoV-2 3CL protease inhibitor clinical candidate. S-217622 was discovered via virtual screening followed biological an in-house...

10.1101/2022.01.26.477782 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-01-26

Large T antigen (TAg) of the human polyomavirus JC virus (JCV) possesses DNA binding and helicase activities, which, together with various cellular proteins, are required for replication viral genome. We now show that JCV-infected cells expressing TAg accumulate in G(2) phase cell cycle as a result activation ATM- ATR-mediated checkpoint pathways. Transient transfection expression vector also induced signaling arrest. Analysis mutants different subnuclear localizations suggested association...

10.1074/jbc.m109.064311 article EN cc-by Journal of Biological Chemistry 2009-11-11

Human monkeypox is a viral zoonosis caused by virus, an orthopoxvirus (OPXV). The majority of human cases have been reported in moist forested regions West and Central Africa, particularly the Democratic Republic Congo (DRC). In this study we investigated zoonotic OPXV infection among wild animals Zambia, which shares border with DRC, to assess geographical distribution OPXV. We screened for antibodies sera from non-human primates (NHPs), rodents shrews ELISA, performed real-time PCR detect...

10.1099/vir.0.070219-0 article EN Journal of General Virology 2014-10-16

Two captive cheetahs from a zoo in Japan died of severe fever with thrombocytopenia syndrome-like illness. Severe syndrome virus, an endemic tickborne phlebovirus, was detected systemically secretion infectious viruses into the saliva. These cases highlight risk for exposure animals to arthropodborne pathogens.

10.3201/eid2409.171667 article EN cc-by Emerging infectious diseases 2018-07-24
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