Shanming Ji

ORCID: 0000-0002-3360-1203
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About
Contact & Profiles
Research Areas
  • Invertebrate Immune Response Mechanisms
  • Neurobiology and Insect Physiology Research
  • Insect symbiosis and bacterial influences
  • Mosquito-borne diseases and control
  • Ubiquitin and proteasome pathways
  • Hippo pathway signaling and YAP/TAZ
  • Viral Infectious Diseases and Gene Expression in Insects
  • Insect Utilization and Effects
  • Genomics and Phylogenetic Studies
  • Developmental Biology and Gene Regulation
  • Pharmaceutical and Antibiotic Environmental Impacts
  • Antibiotic Resistance in Bacteria
  • Genetics, Aging, and Longevity in Model Organisms
  • Insect and Arachnid Ecology and Behavior
  • Plant and animal studies
  • interferon and immune responses
  • Oral microbiology and periodontitis research
  • Plant Parasitism and Resistance
  • Antimicrobial Peptides and Activities
  • TGF-β signaling in diseases
  • Viral Infections and Vectors
  • Wnt/β-catenin signaling in development and cancer
  • Bacterial biofilms and quorum sensing
  • Microtubule and mitosis dynamics
  • Bacterial Identification and Susceptibility Testing

Anhui Agricultural University
2017-2025

Centre National de la Recherche Scientifique
2024

Institut de Biologie Moléculaire et Cellulaire
2024

Innate Pharma (France)
2024

Université de Strasbourg
2023

Institute of Zoology
2014-2019

Chinese Academy of Sciences
2014-2019

Zhejiang University
2011-2013

Sir Run Run Shaw Hospital
2013

Wuhan University
2009

We report the complete sequence of a paralogous copy elongation factor-1 alpha (EF-1 alpha) in honeybee, Apis mellifera (Hymenoptera: Apidae). This differs from previously described positions five introns and 25% nucleotide sites coding regions. The existence two copies EF-1 Drosophila suggests that may be widespread holometabolous insect orders. To distinguish between single, ancient gene duplication parallel, independent fly bee duplications, we performed phylogenetic analysis hexapod...

10.1093/oxfordjournals.molbev.a025920 article EN Molecular Biology and Evolution 1998-03-01

Innate immunity mediated by Toll signalling has been extensively studied, but how is precisely controlled in balancing innate immune responses remains poorly understood. It was reported that the plasma membrane localization of Drosophila MyD88 necessary for recruitment cytosolic adaptor Tube to cell surface, thus contributing transduction. Here we demonstrate Pellino functions as a negative regulator Toll-mediated signalling. We show accumulates at upon activation MyD88-dependent manner....

10.1038/ncomms4458 article EN cc-by Nature Communications 2014-03-17

Significance Previous studies have demonstrated that Bam protein plays a critical role promoting early germ-line cell differentiation in the Drosophila ovary. Although its regulation and genetic functions been extensively investigated over last 20 years, biochemical nature of has still remained elusive. Here, we show as an ubiquitin-associated regulates stability CycA. Our study uncovers mechanism by which protein, cooperates with Otu to deubiquitinate stabilize CycA, thereby balancing GSC...

10.1073/pnas.1619188114 article EN Proceedings of the National Academy of Sciences 2017-05-08

Black tea is the most widely consumed drink in world and has consistently been reported to possess anti-aging benefits. However, whether theaflavins, one type of characteristic phytochemicals black extracts, are involved regulating aging lifespan consumers remains largely unknown. In this study, we show that theaflavins play a beneficial role preventing age-onset intestinal leakage dysbiosis, thus delaying Drosophila. Mechanistically, regulate condensate assembly Imd negatively govern...

10.1016/j.isci.2021.102150 article EN cc-by-nc-nd iScience 2021-02-07

Toll signaling is well known for its pivotal role in the host response against invasion of external pathogens. Here, we investigate potential involvement intersection between and oncogenic cells. We show that loss myeloid differentiation factor 88 (Myd88) leads to drastic fly death after injection RasV12-GFP Transcriptomic analyses challenging flies with cells or bacteria distinct inductions Myd88-dependent genes. note downregulation Myd88 tracheal system accounts mortality, ectopic...

10.1016/j.celrep.2024.113677 article EN cc-by-nc-nd Cell Reports 2024-01-17

Abstract Eukaryotic translation initiation factors have long been recognized for their critical roles in governing the of coding RNAs into peptides/proteins. However, whether they harbor functional activities at post-translational level remains poorly understood. Here, we demonstrate that eIF3f1 ( eukaryotic factor 3 subunit f1 ), which encodes an archetypal deubiquitinase, is essential antimicrobial innate immune defense Drosophila melanogaster . Our vitro and vivo evidence indicate...

10.1038/s44319-024-00067-z article EN cc-by EMBO Reports 2024-01-26

Abstract The Drosophila melanogaster (fruit fly) misexpression suppressor of Ras 4 (MESR4) gene encodes a potential transcription factor and plays critical roles in various biological processes, including embryonic development, lipid metabolism, eye–antennal germline stem cell differentiation. However, whether it is involved modulating intestinal homeostasis remains elusive. In this study, we provide compelling evidence demonstrating that MESR4 bona fide regulator preventing age‐onset...

10.1111/1744-7917.13506 article EN Insect Science 2025-02-18

Cullin 2 (Cul2), a core component of the Cullin-RING E3 ubiquitin ligase complex, is integral to regulating distinct biological processes. However, its role in innate immune defenses remains poorly understood. In this study, we investigated functional significance Cul2 deficiency (IMD) signaling-mediated antimicrobial reactions Drosophila melanogaster (fruit fly). We demonstrated that loss-of-function led marked reduction peptide induction following bacterial infection, which was associated...

10.3390/ijms26062627 article EN International Journal of Molecular Sciences 2025-03-14

The intestine, a high-turnover tissue, plays critical role in regulating aging and health both vertebrates invertebrates.Maintaining the epithelial barrier function of intestine by preserving innate immune homeostasis significantly delays prevents mortality.In an effort to explore effective chemicals materials that can improve intestinal integrity, we performed nonbiased screen utilizing Drosophila as animal model.We showed long-term uptake aspirin markedly prevented age-onset gut leakage,...

10.14336/ad.2020.1008 article EN cc-by Aging and Disease 2021-01-01

Negative regulators of the inflammatory responses are essential for maintenance immune homeostasis and organismal fitness. In Drosophila , deubiquitinase (Dub) dTrbd selectively restricts K63-linked ubiquitination modification dTak1, a pivotal kinase IMD signaling pathway, to regulate innate response. However, which domain how it functions enable dTrbd’s activity remain unexplored. Here, we provide compelling evidence showing that NZF is its association with dTak1. Meanwhile, Linker region...

10.3389/fimmu.2022.932268 article EN cc-by Frontiers in Immunology 2022-07-14

In Drosophila , the endoplasmic reticulum-associated protein degradation (ERAD) is engaged in regulating pleiotropic biological processes, with regard to retinal degeneration, intestinal homeostasis, and organismal development. The extent which it functions controlling fly innate immune defense, however, remains largely unknown. Here, we show that blockade of ERAD fat bodies antagonizes Toll but not IMD defense . Genetic approaches further suggest a functional role Me31B ERAD-mediated...

10.3389/fimmu.2022.1099637 article EN cc-by Frontiers in Immunology 2023-01-19

Significance Inhibitory Smads (I-Smads) play important roles to negatively regulate TGF-β/BMP (bone morphogenetic protein) signaling, thus controlling numerous cellular and developmental processes. Recent studies have suggested that Smad7, a member of I-Smads, is overexpressed in cancer types its abundance positively correlated the malignancy. However, molecular mechanism underlying action I-Smads cells remains poorly understood. Here we show Drosophila I-Smad, Dad, accesses membrane via...

10.1073/pnas.1710540114 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2017-11-27

The bee genus Lasioglossum includes > 1,000 species of bees distributed on all continents except Antarctica. is a major component the fauna in Holarctic, Ethiopian, and Asian regions an important group for investigating evolution social behavior bees. Given its cosmopolitan distribution, historical biogeography considerable interest. We reconstructed phylogenetic relationships among subgenera within s.s., using DNA sequence data from slowly evolving nuclear gene, elongation factor-1 alpha....

10.1093/sysbio/50.2.268 article EN Systematic Biology 2001-03-01

A polyphasic taxonomic approach was used to study strain 12116T, which isolated from desert sand in Xinjiang, China. Cells of the isolate were Gram-negative, non-motile, rod-shaped and aerobic. MK-7 predominant respiratory menaquinone. The DNA G+C content 46.3 mol%. phylogenetic analysis based on 16S rRNA gene sequences showed that most closely related members genus Dyadobacter, with similarities ranging 94.7 96.6 %. Therefore, basis genotypic phenotypic data, 12116T represents a novel...

10.1099/ijs.0.001404-0 article EN INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 2009-01-01

Aspirin, also known as acetylsalicylic acid, is widely consumed a pain reliever and an anti-inflammatory well anti-platelet agent. Recently, our studies using the animal model of Drosophila demonstrated that dietary supplementation aspirin renovates age-onset intestinal dysfunction delays organismal aging. Nevertheless, it remains probable plays functional roles in other biological activities, for instance antiviral defense reactions. Intriguingly, we observed replications several types...

10.3390/molecules28145300 article EN cc-by Molecules 2023-07-09

Background: Drosophila ubiquitin carboxy-terminal hydrolase L5 (Uch-L5) functions as a critical component of the 26S proteasome to mediate degradation polyubiquitinated proteins. It was recently shown modulate tissue/organ development by targeting Smoothened protein in hedgehog pathway. However, whether it plays role controlling organismal immune response remains largely unknown. Methods: Reverse transcription plus quantitative polymerase chain reaction (RT-qPCR), dual-luciferase, and...

10.31083/j.fbl2811294 article EN cc-by Frontiers in Bioscience-Landmark 2023-11-23
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