Stefan de Folter

ORCID: 0000-0003-4363-7274
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Plant Molecular Biology Research
  • Plant Reproductive Biology
  • Photosynthetic Processes and Mechanisms
  • Plant nutrient uptake and metabolism
  • Plant tissue culture and regeneration
  • Plant Gene Expression Analysis
  • Plant Physiology and Cultivation Studies
  • Light effects on plants
  • Chromosomal and Genetic Variations
  • Polysaccharides and Plant Cell Walls
  • Genomics and Phylogenetic Studies
  • Plant Stress Responses and Tolerance
  • Postharvest Quality and Shelf Life Management
  • Plant Genetic and Mutation Studies
  • Genomics and Chromatin Dynamics
  • Plant Pathogens and Fungal Diseases
  • Plant-Microbe Interactions and Immunity
  • CRISPR and Genetic Engineering
  • Plant Parasitism and Resistance
  • Seed Germination and Physiology
  • Plant Disease Management Techniques
  • Plant Micronutrient Interactions and Effects
  • Ubiquitin and proteasome pathways
  • Banana Cultivation and Research
  • Molecular Biology Techniques and Applications

Center for Research and Advanced Studies of the National Polytechnic Institute
2016-2025

Instituto Tecnológico Superior de Irapuato
2011-2025

Instituto Politécnico Nacional
2009-2024

Center of Research and Technologic Development in Electrochemistry
2016

Centre for BioSystems Genomics
2001-2013

Research International (United States)
2006-2012

Wageningen University & Research
2006-2012

Max Planck Institute for Developmental Biology
2012

Dirección de Investigación y Desarrollo
2010

MADS-box transcription factors are key regulators of several plant development processes. Analysis the complete Arabidopsis genome sequence revealed 107 genes encoding proteins, which 84% unknown function. Here, we provide a overview this family, describing gene structure, expression, localization, protein motif organization, and phylogenetic relationship each member. We have divided factor family into five groups (named MIKC, Malpha, Mbeta, Mgamma, Mdelta) based on relationships conserved...

10.1105/tpc.011544 article EN The Plant Cell 2003-07-01

Interactions between proteins are essential for their functioning and the biological processes they control. The elucidation of interaction maps based on yeast studies is a first step toward understanding molecular networks provides framework that possess capacity specificity to interact. Here, we present comprehensive plant protein-protein interactome map nearly all members Arabidopsis thaliana MADS box transcription factor family. A matrix-based two-hybrid screen >100 this family revealed...

10.1105/tpc.105.031831 article EN The Plant Cell 2005-04-02

Floral organs, whose identity is determined by specific combinations of homeotic genes, originate from a group undifferentiated cells called the floral meristem. In Arabidopsis, gene AGAMOUS (AG) terminates meristem activity and promotes development stamens carpels. To understand program expression activated AG, we followed genome-wide during early stamen carpel development. The AG target genes included most for which mutant screens revealed function downstream AG. Novel targets were...

10.1242/dev.01600 article EN Development 2005-01-06

Abstract TEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR1 (TCP) transcription factors control developmental processes in plants. The 24 TCP encoded the Arabidopsis (Arabidopsis thaliana) genome are divided into two classes, class I and II TCPs, which proposed to act antagonistically. We performed a detailed phenotypic analysis of tcp20 mutant, showing an increase leaf pavement cell sizes 10-d-old seedlings. Subsequently, glucocorticoid receptor induction assay was performed, aiming...

10.1104/pp.112.200303 article EN PLANT PHYSIOLOGY 2012-06-20

Plant MADS box proteins play important roles in a plethora of developmental processes. In order to regulate specific sets target genes, dimerize and are thought assemble into multimeric complexes. this study large-scale yeast three-hybrid screen is utilized provide insight the higher-order complex formation capacity Arabidopsis family. SEPALLATA3 (SEP3) has been shown mediate and, therefore, special attention paid factor study.In total, 106 complexes were identified; more than half these at...

10.1186/gb-2009-10-2-r24 article EN cc-by Genome biology 2009-02-25

Heavy metal hyperaccumulation in plants is an intriguing and poorly understood phenomenon. Transmembrane transporters are assumed to play a key role this process. We describe the cloning isolation of three zinc transporter cDNAs from Zn hyperaccumulator Thlaspi caerulescens. The ZTP1 gene highly similar Arabidopsis ZAT gene. Of other two, one most probably allele recently cloned ZNT1 T. caerulescens (Pence et al; Proceedings National Academy Science USA 97, 4956–4960, 2000). second, called...

10.1046/j.1365-3040.2001.00666.x article EN Plant Cell & Environment 2001-02-01

ABSTRACT Heavy metal hyperaccumulation in plants is an intriguing and poorly understood phenomenon. Transmembrane transporters are assumed to play a key role this process. We describe the cloning isolation of three zinc transporter cDNAs from Zn hyperaccumulator Thlaspi caerulescens . The ZTP1 gene highly similar Arabidopsis ZAT gene. Of other two, one most probably allele recently cloned ZNT1 T. ( Pence et al ; Proceedings National Academy Science USA 97, 4956–4960, 2000). second, called...

10.1111/j.1365-3040.2001.00666.x article EN Plant Cell & Environment 2001-02-01

Flowers are the most complex structures of plants. Studies Arabidopsis thaliana, which has typical eudicot flowers, have been fundamental in advancing structural and molecular understanding flower development. The main processes stages development summarized to provide a framework interpret detailed genetic studies genes assigned functions during is extended recent genomics uncovering key regulatory modules involved. Computational models used study concerted action dynamics gene module that...

10.1199/tab.0127 article EN The Arabidopsis Book 2010-01-01

Abstract The transition from vegetative to reproductive development is one of the most important phase changes in plant life cycle. This step controlled by various environmental signals that are integrated at molecular level so-called floral integrators. One such integrator Arabidopsis (Arabidopsis thaliana) MADS domain transcription factor SUPPRESSOR OF OVEREXPRESSION CONSTANS1 (SOC1). Despite extensive genetic studies, little known about transcriptional control SOC1, and we just starting...

10.1104/pp.112.202614 article EN PLANT PHYSIOLOGY 2012-07-12

Analyses of the functions TEOSINTE-LIKE1, CYCLOIDEA, and PROLIFERATING CELL FACTOR1 (TCP) transcription factors have been hampered by functional redundancy between its individual members. In general, putative functionally redundant genes are predicted based on sequence similarity confirmed genetic analysis. TCP family, however, identification is impeded relatively low overall similarity. a search for pairs that control Arabidopsis leaf development, this work performed an integrative...

10.1093/jxb/ert337 article EN cc-by Journal of Experimental Botany 2013-10-15

Significance Seed desiccation tolerance (DT) is one of the most fascinating processes higher plants, and has played a fundamental role in evolution land plants. DT allows plant seeds to remain viable dry state for years even centuries. What key transcription factors (TFs) are that activate mechanisms allow maintain cellular DNA integrity centuries remains largely unknown. In this paper, we report identification TFs act as major nodes transcriptional networks regulate acquisition seed DT. We...

10.1073/pnas.1610985113 article EN Proceedings of the National Academy of Sciences 2016-08-22

Summary Cytokinins have many essential roles in embryonic and post‐embryonic growth development, but their role fruit morphogenesis is currently not really known. Moreover, information about the spatio‐temporal localization pattern of cytokinin signaling gynoecia fruits lacking. Therefore, synthetic reporter line TCS::GFP was used to visualize during gynoecium development. Fluorescence detected at medial regions developing gynoecia, and, unexpectedly, valve margin fruits, severely altered...

10.1111/j.1365-313x.2012.05062.x article EN The Plant Journal 2012-05-28

Fruits and seeds are the major food source on earth. Both derive from gynoecium and, therefore, it is crucial to understand mechanisms that guide development of this organ angiosperm species. In Arabidopsis, composed two congenitally fused carpels, where domains: medial lateral, can be distinguished. The domain includes carpel margin meristem (CMM) key for production internal tissues involved in fertilization, such as septum, ovules, transmitting tract. Interestingly, shows a high cytokinin...

10.1371/journal.pgen.1006726 article EN cc-by PLoS Genetics 2017-04-07
Jahed Ahmed Oluwafemi Alaba Gazala Ameen Vaishali Arora Mario A Arteaga-Vazquez and 95 more Alok Arun Julia Bailey-Serres Laura Bartley George W. Bassel Dominique C. Bergmann Edoardo Bertolini Kaushal Kumar Bhati Noel Blanco‐Touriñán Steven P. Briggs Javier Brumós Benjamin Buer Adrien Burlaocot Sergio Alan Cervantes-Pérez Sixue Chen Bruno Contreras‐Moreira Francisco J. Corpas Alfredo Cruz‐Ramírez Cesar L. Cuevas‐Velazquez Josh T. Cuperus Lisa I David Stefan de Folter Peter Denolf Pingtao Ding William P Dwyer Matthew M. S. Evans Nancy George Pubudu Handakumbura Maria J Harrison Elizabeth S. Haswell Venura Herath Yuling Jiao Robert E. Jinkerson Uwe John Sanjay Joshi Abhishek Joshi Lydia-Marié Joubert Ramesh Katam Harmanpreet Kaur Yana Kazachkova Sunil K. Kenchanmane Raju Mather Ali Khan Rajdeep S. Khangura Ajay Kumar Arun Kumar Pankaj Kumar Pradeep Kumar Dhruv Lavania Tedrick Thomas Salim Lew Mathew G. Lewsey Chien-Yuan Lin Dianyi Liu Le Liu Tie Liu Ansul Lokdarshi Ai My Luong Iain C. Macaulay Sakil Mahmud Ari Pekka Mähönen Kamal Kumar Malukani Alexandre P. Marand Carly A Martin Claire D. McWhite Devang Mehta Miguel Miñambres Martín Jenny C. Mortimer Lachezar A. Nikolov Tatsuya Nobori Trevor M. Nolan Aaron J. Ogden Marisa S. Otegui Mark‐Christoph Ott José M. Palma Puneet Paul Atique ur Rehman Maida Romera‐Branchat Luís C. Romero Ronelle Roth Saroj Kumar Sah Rachel Shahan Shyam Solanki Bao‐Hua Song Rosangela Sozzani Gary Stacey Anna N. Stepanova Nicolas L. Taylor Marcela K. Tello‐Ruiz Tuan M. Tran Rajiv Kumar Tripathi Batthula Vijaya Lakshmi Vadde Tamás Varga Marija Vidović Justin W. Walley Zhiyong Wang Renate Weizbauer James Whelan

With growing populations and pressing environmental problems, future economies will be increasingly plant-based. Now is the time to reimagine plant science as a critical component of fundamental science, agriculture, stewardship, energy, technology healthcare. This effort requires conceptual technological framework identify map all cell types, comprehensively annotate localization organization molecules at cellular tissue levels. framework, called Plant Cell Atlas (PCA), for understanding...

10.7554/elife.66877 article EN cc-by eLife 2021-09-07

Abstract Morphogenesis requires the coordination of cellular behaviors along developmental axes. In plants, gradients growth and differentiation are typically established a single longitudinal primordium axis to control global organ shape. Yet, it remains unclear how these locally adjusted regulate formation complex organs that consist diverse tissue types. Here we combine quantitative live imaging at resolution with genetics, chemical treatments understand Arabidopsis thaliana female...

10.1038/s41467-024-47325-1 article EN cc-by Nature Communications 2024-04-04

Summary MADS‐domain transcription factors are essential for proper flower and seed development in angiosperms their role determination of floral organ identity can be described by the ‘ABC model’ development. Recently, close relatives B‐type genes were identified phylogenetic studies, which referred to as B sister (B s ) genes. Here, we report isolation characterization a MADS‐box member from petunia, designated FBP24 . An fbp24 knock‐down line appeared closely resemble Arabidopsis mutant...

10.1111/j.1365-313x.2006.02846.x article EN The Plant Journal 2006-08-22

Differentiation processes are responsible for the diversity and functional specialization of cell types that compose an organism. The outcome these can be studied at molecular, physiologic, biochemical levels by comparing different types, but complexity dynamics regulatory specify differentiation largely unexplored.Here we identified pollen-specific MIKC* class MADS-domain transcription factors as major regulators transcriptome during male reproductive development in Arabidopsis thaliana....

10.1186/gb-2007-8-11-r249 article EN cc-by Genome biology 2007-11-22

Abstract Synchronized communication between gametophytic and sporophytic tissue is crucial for successful reproduction, hormones seem to have a prominent role in it. Here, we studied the of Arabidopsis (Arabidopsis thaliana) cytochrome P450 CYP78A9 enzyme during reproductive development. First, controlled pollination experiments indicate that responds fertilization. Second, while overexpression can uncouple fruit development from fertilization, cyp78a8 cyp78a9 loss-of-function mutant has...

10.1104/pp.113.218214 article EN cc-by PLANT PHYSIOLOGY 2013-04-22

Grafting procedures are an excellent tool to study long range signalling processes within a plant. In the last decade, suitable flat-surface grafting for young Arabidopsis seedlings using collar support graft have been developed, allowing of long-range signals from molecular perspective.In modification presented here, scion and stock put together on medium without supporting elements, while cotyledons removed scion, resulting in increased success that can reach up 100%. At same time,...

10.1186/1746-4811-9-14 article EN cc-by Plant Methods 2013-05-04

Purple acid phosphatases (PAPs) play an important role in plant phosphorus nutrition, both by liberating from organic sources the soil and modulating distribution within throughout growth development. Furthermore, members of PAP protein family have been implicated a broader mineral homeostasis, stress responses We identified 33 candidate encoding gene models maize (Zea mays ssp. var. B73) reference genome. The Pap includes clear single-copy ortholog Arabidopsis AtPAP26, shown previously to...

10.3389/fpls.2015.00341 article EN cc-by Frontiers in Plant Science 2015-05-19
Coming Soon ...