Melissa R. Miller

ORCID: 0000-0002-8570-3981
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About
Contact & Profiles
Research Areas
  • Sperm and Testicular Function
  • Reproductive Biology and Fertility
  • Genetic Associations and Epidemiology
  • Liver Disease Diagnosis and Treatment
  • Genomics and Rare Diseases
  • Ion channel regulation and function
  • Diabetes, Cardiovascular Risks, and Lipoproteins
  • Ion Channels and Receptors
  • Cystic Fibrosis Research Advances
  • Endoplasmic Reticulum Stress and Disease
  • Lipid metabolism and biosynthesis
  • Bioinformatics and Genomic Networks
  • Neurobiology and Insect Physiology Research
  • RNA Interference and Gene Delivery
  • BRCA gene mutations in cancer
  • Pharmaceutical Economics and Policy
  • Neonatal Respiratory Health Research
  • Pancreatic function and diabetes
  • Cancer Genomics and Diagnostics
  • Health Systems, Economic Evaluations, Quality of Life
  • Computational Drug Discovery Methods
  • Diet, Metabolism, and Disease
  • Reproductive biology and impacts on aquatic species
  • Epigenetics and DNA Methylation
  • Cannabis and Cannabinoid Research

Pfizer (United States)
2017-2025

Northeastern University
2024

Columbia University
2023

University of California, Berkeley
2014-2021

University of Helsinki
2020

Institute for Molecular Medicine Finland
2020

Target (United States)
2018

Johns Hopkins University
2009-2017

High Throughput Biology (United States)
2011-2017

Hospital for Sick Children
2013-2015

The Pharma Proteomics Project is a precompetitive biopharmaceutical consortium characterizing the plasma proteomic profiles of 54,219 UK Biobank participants. Here we provide detailed summary this initiative, including technical and biological validations, insights into disease signatures, prediction modelling for various demographic health indicators. We present comprehensive protein quantitative trait locus (pQTL) mapping 2,923 proteins that identifies 14,287 primary genetic associations,...

10.1038/s41586-023-06592-6 article EN cc-by Nature 2023-10-04

Steroids regulate cell proliferation, tissue development, and signaling via two pathways: a nuclear receptor mechanism genome-independent signaling. Sperm activation, egg maturation, steroid-induced anesthesia are executed the latter pathway, key components of which remain unknown. Here, we present characterization human sperm progesterone that is conveyed by orphan enzyme α/β hydrolase domain-containing protein 2 (ABHD2). We show ABHD2 highly expressed in spermatozoa, binds progesterone,...

10.1126/science.aad6887 article EN Science 2016-03-18

This study aimed to investigate the value of imaging-based multivariable body composition profiling by describing its association with coronary heart disease (CHD), type 2 diabetes (T2D), and metabolic health on individual population levels.The first 6,021 participants scanned UK Biobank were included. Body profiles (BCPs) calculated, including abdominal subcutaneous adipose tissue, visceral tissue (VAT), thigh muscle volume, liver fat, fat infiltration (MFI), determined using magnetic...

10.1002/oby.22210 article EN cc-by-nc-nd Obesity 2018-05-22

Abstract The UK Biobank Pharma Proteomics Project (UKB-PPP) is a collaboration between the (UKB) and thirteen biopharmaceutical companies characterising plasma proteomic profiles of 54,306 UKB participants. Here, we describe results from first phase UKB-PPP, including protein quantitative trait loci (pQTL) mapping 1,463 proteins that identifies 10,248 primary genetic associations, which 85% are newly discovered. We also identify independent secondary associations in 92% cis 29% trans loci,...

10.1101/2022.06.17.496443 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-06-18
Maria C. Costanzo Marcin von Grotthuss Jeffrey Massung Dongkeun Jang Lizz Caulkins and 95 more Ryan Koesterer Clint Gilbert Ryan Welch Parul Kudtarkar Quy Hoang Andrew P. Boughton Preeti Singh Ying Sun Marc Duby Annie Moriondo Trang Thi Huyen Nguyen Patrick Smadbeck Benjamin Alexander MacKenzie Brandes Mary Carmichael Peter Dornbos Todd J. Green Kenneth C. Huellas-Bruskiewicz Yue Ji Alexandria Kluge Aoife McMahon Josep M. Mercader Oliver Ruebenacker Sebanti Sengupta Dylan Spalding Daniel Taliun Phil Smith Melissa K. Thomas Beena Akolkar M. Julia Brosnan Andriy Cherkas Audrey Y. Chu Eric B. Fauman Caroline S. Fox Tania N. Kamphaus Melissa R. Miller Lynette Nguyen Afshin Parsa Dermot F. Reilly Hartmut Ruetten David Wholley Norann A. Zaghloul Gonçalo R. Abecasis David Altshuler Thomas Keane Mark I. McCarthy Kyle J. Gaulton José C. Florez Michael Boehnke Noël P. Burtt Jason Flannick Gonçalo R. Abecasis Beena Akolkar Benjamin Alexander Nicholette D. Allred David Altshuler Jennifer E. Below Richard N. Bergman Joline W. J. Beulens John Blangero Michael Boehnke Krister Bokvist Erwin Böttinger Andrew P. Boughton Donald W. Bowden M. Julia Brosnan Christopher D. Brown Kenneth Bruskiewicz Noël P. Burtt Mary Carmichael Lizz Caulkins Inês Cebola John C. Chambers Yii‐Der Ida Chen Andriy Cherkas Audrey Y. Chu Christopher Clark Melina Claussnitzer Maria C. Costanzo Nancy J. Cox Marcel den Hoed Duc Dong Marc Duby Ravindranath Duggirala Josée Dupuis Petra J. M. Elders J Engreitz Eric B. Fauman Jorge Ferrer Jason Flannick Paul Flicek Matthew Flickinger José C. Florez Caroline S. Fox Timothy M. Frayling

Associations between human genetic variation and clinical phenotypes have become a foundation of biomedical research. Most repositories these data seek to be disease-agnostic therefore lack disease-focused views. The Type 2 Diabetes Knowledge Portal (T2DKP) is public resource datasets genomic annotations dedicated type diabetes (T2D) related traits. Here, we make the T2DKP more accessible prospective users useful existing users. First, evaluate T2DKP's comprehensiveness by comparing its with...

10.1016/j.cmet.2023.03.001 article EN cc-by-nc-nd Cell Metabolism 2023-03-23

Significance The calcium channel of sperm—CatSper—is vital for male fertility. CatSper is activated by the hormone progesterone, but its pharmacological profile not well studied. By exploring steroid selectivity activation, we found one additional agonist—pregnenolone sulfate—and two plant-derived inhibitors pristimerin and lupeol. averting sperm hyperactivation, both can prevent fertilization, thus acting as contraceptive agents. Additionally, regulation endogenous steroids, explain why...

10.1073/pnas.1700367114 article EN Proceedings of the National Academy of Sciences 2017-05-15

A major hindrance to evaluating nematode populations for anthelmintic resistance, as well screening existing drugs, new compounds, or bioactive plant extracts properties, is the lack of an efficient, objective, and reproducible in vitro assay that adaptable multiple life stages parasite genera. To address this need we have developed "Worminator" system, which objectively quantitatively measures motility microscopic parasitic nematodes. The system built around computer application...

10.1016/j.ijpddr.2014.08.003 article EN cc-by-nc-nd International Journal for Parasitology Drugs and Drug Resistance 2014-08-28

Background Cow's milk intake has been inconsistently associated with islet autoimmunity (IA) and type 1 diabetes (T1D) development. Genetic environmental factors may modify the effect of cow's on IA T1D risk. Methods The Diabetes Autoimmunity Study in Young (DAISY) follows children at increased risk (presence autoantibodies to insulin, GAD65, or IA-2 twice succession) We examined 1835 DAISY data intake: 143 developed IA, 40 subsequently T1D. protein lactose were calculated from prospectively...

10.1111/pedi.12115 article EN Pediatric Diabetes 2014-01-20

STUDY QUESTIONAre significant abnormalities of CatSper function present in IVF patients with normal sperm concentration and motility if so what is their functional significance for fertilization success?

10.1093/humrep/dev243 article EN cc-by Human Reproduction 2015-10-08

Circulating immunoreactive trypsinogen (IRT), a biomarker of exocrine pancreatic disease in cystic fibrosis (CF), is elevated most CF newborns. In those with severe transmembrane conductance regulator (CFTR) genotypes, IRT declines rapidly the first years life, reflecting progressive damage. Consistent this progression, less newborn measure would reflect more disease, including compromised islet compartments, and potentially increased risk CF-related diabetes (CFRD). We show two independent...

10.2337/db13-1464 article EN cc-by-nc-nd Diabetes 2014-02-19

Ion channels control sperm navigation within the female reproductive tract and, thus, are critical for their ability to find and fertilize an egg. The flagellar calcium channel CatSper controls hyperactivated motility is dependent on alkaline cytoplasmic pH. latter accomplished by either proton transporters or, in human sperm, via voltage-gated Hv1. To provide concerted regulation, ion regulatory proteins must be compartmentalized. Here, we describe nanodomains comprised of Hv1, CatSper, its...

10.1016/j.celrep.2018.08.016 article EN cc-by Cell Reports 2018-09-01

Abstract The UK Biobank Exome Sequencing Consortium (UKB-ESC) is a unique private/public partnership between the and eight biopharma companies that will sequence exomes of all ∼500,000 participants. Here we describe early results from exome data generated by this consortium for first ∼200,000 UKB subjects key features project enabled UKB-ESC to come together generate data. sequencing 200,643 enrollees are now accessible research community. Approximately 10M variants were observed within...

10.1101/2020.11.02.20222232 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2020-11-04

During transit through the female reproductive tract, mammalian spermatozoa are exposed to increasing concentrations of progesterone (P4) released by cumulus oophorus. P4 triggers massive calcium influx into human sperm activation sperm-specific channel CatSper. These properties thought be unique since CatSper is not sensitive in rodent sperm. Here, performing patch clamp recording from rhesus macaque for first time, we report that they express P4-sensitive identically and react inducing...

10.1095/biolreprod.115.129783 article EN Biology of Reproduction 2015-10-22

Does a man (patient 1) with previously described deficiency in principle cation channel of sperm (CatSper) function have mutation the CatSper-epsilon (CATSPERE) and/or CatSper-zeta (CATSPERZ) gene?Patient 1 has homozygous in-frame 6-bp deletion exon 18 (c.2393_2398delCTATGG, rs761237686) CATSPERE.CatSper is principal calcium mammalian spermatozoa. Spermatozoa from patient had specific loss CatSper and were unable to fertilize at IVF. Loss could not be attributed genetic abnormalities coding...

10.1093/humrep/dey278 article EN cc-by Human Reproduction 2018-08-22

Transient receptor potential canonical 3/6/7 (TRPC3/6/7) are highly homologous receptor-operated nonselective cation channels. Despite their physiological significance, very few selective and potent agonists available for functional examination of these Using a cell-based high throughput screening approach, lead compound with the pyrazolopyrimidine skeleton was identified as TRPC6 agonist. Synthetic schemes its analogues were established, structural–activity relationship studies carried out....

10.1021/acs.jmedchem.7b00304 article EN Journal of Medicinal Chemistry 2017-04-10
Katherine Johnson Peter Leary Olivier Govaere Matthew J. Barter Sarah Charlton and 95 more Simon Cockell Dina Tiniakos Michalina Zatorska Pierre Bédossa M. Julia Brosnan Jeremy Cobbold Mattias Ekstedt Guruprasad P. Aithal Karine Clément Jörn M. Schattenberg Jérôme Boursier Vlad Ratziu Elisabetta Bugianesi Quentin M. Anstee Ann K. Daly James Clark Heather J. Cordell Rebecca Darlay Christopher P. Day Timothy Hardy Yang‐Lin Liu Fiona Oakley Jeremy M. Palmer Rachel Queen Kristy Wonders Patrick M. Bossuyt Adriaan G. Holleboom Hadi Zafarmand Yasaman Vali Jenny Lee Karine Clément Raluca Pais Detlef Schuppan Michael Allison Sergio Rodriguez Cuenca Vanessa Pellegrinelli Michèle Vacca Antonio Vidal‐Puig Tuulia Hyötyläinen Aidan McGlinchey Matej Orešič Partho Sen José M. Mato Óscar Millet Jean‐François Dufour Stephen A. Harrison Stefan Neubauer Michael Pavlides Ferenc Mózes Salma Akhtar Rajarshi Banerjee Matt Kelly Elizabeth Shumbayawonda Andrea Dennis Charlotte Erpicum Manuel Romero‐Gómez Rocío Gallego‐Durán Isabel Fernández-Lizaranzu M.A. Karsdal Jenny Lee Mette Juul Fisker Elisabeth Erhardtsen Daniel Guldager Kring Rasmussen Per Qvist Antonia Sinisi Estelle Sandt Maria Manuela Tonini Maurizio Parola Chiara Rosso Fabio Marra Amalia Gastaldelli Sven Francque Stergios Kechagias Hannele Yki‐Järvinen Kimmo Porthan Saskia W. C. van Mil George Papatheodoridis Helena Cortez‐Pinto Luca Valenti Salvatore Petta Luca Miele Andreas Geier Christian Trautwein Paul Hockings Philip N. Newsome David Wenn Cecília M. P. Rodrigues Rémy Hanf Pierre Chaumat Christian Rosenquist Aldo Trylesinski Pablo A. Ortiz Kevin L. Duffin Carla Yunis Melissa R. Miller

Serum microRNA (miRNA) levels are known to change in non-alcoholic fatty liver disease (NAFLD) and may serve as useful biomarkers. This study aimed profile miRNAs comprehensively at all NAFLD stages.

10.1016/j.jhepr.2021.100409 article EN cc-by-nc-nd JHEP Reports 2021-11-25
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