Hiroaki Kitano

ORCID: 0000-0002-3589-1953
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About
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Research Areas
  • Gene Regulatory Network Analysis
  • Bioinformatics and Genomic Networks
  • Microbial Metabolic Engineering and Bioproduction
  • Robotic Locomotion and Control
  • Computational Drug Discovery Methods
  • Modular Robots and Swarm Intelligence
  • Robotic Path Planning Algorithms
  • Robotics and Automated Systems
  • Reinforcement Learning in Robotics
  • Evolutionary Algorithms and Applications
  • Natural Language Processing Techniques
  • Multi-Agent Systems and Negotiation
  • Gene expression and cancer classification
  • Fungal and yeast genetics research
  • Speech and Audio Processing
  • Genetics, Bioinformatics, and Biomedical Research
  • AI-based Problem Solving and Planning
  • Embedded Systems Design Techniques
  • Cell Image Analysis Techniques
  • Topic Modeling
  • Robot Manipulation and Learning
  • Single-cell and spatial transcriptomics
  • Prosthetics and Rehabilitation Robotics
  • Speech and dialogue systems
  • Influenza Virus Research Studies

Systems Biology Institute
2015-2024

Okinawa Institute of Science and Technology Graduate University
2015-2024

Sony Corporation (United States)
2001-2024

InteraXon (Canada)
2024

University of Toronto
2024

Seoul National University
2024

Sony Computer Science Laboratories
2011-2023

Sony (Japan)
2023

The Alan Turing Institute
2021-2023

RIKEN Center for Integrative Medical Sciences
2013-2022

Piero Carninci Takeya Kasukawa Shintaro Katayama Julian Gough Martin C. Frith and 95 more Norihiro Maeda Rieko Oyama Timothy Ravasi Boris Lenhard Christine A. Wells Rimantas Kodzius Koya Shimokawa Vladimir B. Bajić Steven E. Brenner Serge Batalov Alistair R. R. Forrest Mihaela Zavolan Melissa J. Davis Laurens Wilming Vassilis Aidinis Jonathan Allen Alberto Ambesi‐Impiombato Rolf Apweiler Rajith Aturaliya Timothy L. Bailey Mukul S. Bansal Laura L. Baxter Kirk W. Beisel Tom Bersano Hidemasa Bono Alistair M. Chalk Kuo Ping Chiu Vijayata Choudhary Alan Christoffels D. R. Clutterbuck Mark L. Crowe Emiliano Dalla Brian P. Dalrymple Bernard de Bono Giusy Della Gatta Diego di Bernardo Thomas A. Down Pär G. Engström Michela Fagiolini Geoffrey J. Faulkner Colin Fletcher Tatsuya Fukushima Masaaki Furuno Sugiko Futaki Manuela Gariboldi Patrik Georgii‐Hemming T Gingeras Takashi Gojobori Richard E. Green Stefano Gustincich Matthias Harbers Yoshitaka Hayashi Takao K. Hensch Nobutaka Hirokawa David E. Hill Łukasz Huminiecki Michele Iacono Kazuho Ikeo Atsushi Iwama Takanori Ishikawa Lars Martin Jakt Alexander Kanapin Masaru Katoh Yuka Imamura Kawasawa Janet Kelso Hiroshi Kitamura Hiroaki Kitano George Kollias Sivanand Krishnan Adéle Kruger Sarah Kummerfeld Igor V. Kurochkin Liana F. Lareau Dejan Lazarević Leonard Lipovich Jinfeng Liu Sabino Liuni Sean McWilliam M. Madan Babu Martin Madera Luigi Marchionni Hideo Matsuda Shu‐ichi Matsuzawa Hiroaki Miki Flavio Mignone S. Miyake Ken A. Morris Salim Mottagui‐Tabar Nicola Mulder Norio Nakano Hiromitsu Nakauchi Patrick Ng Roland Nilsson Seiji Nishiguchi Shigemichi Nishikawa

This study describes comprehensive polling of transcription start and termination sites analysis previously unidentified full-length complementary DNAs derived from the mouse genome. We identify 5' 3' boundaries 181,047 transcripts with extensive variation in arising alternative promoter usage, splicing, polyadenylation. There are 16,247 new protein-coding transcripts, including 5154 encoding proteins. Genomic mapping transcriptome reveals transcriptional forests, overlapping on both...

10.1126/science.1112014 article EN Science 2005-09-01

PANTHER is a large collection of protein families that have been subdivided into functionally related subfamilies, using human expertise. These subfamilies model the divergence specific functions within families, allowing more accurate association with function (ontology terms and pathways), as well inference amino acids important for functional specificity. Hidden Markov models (HMMs) are built each family subfamily classifying additional sequences. The latest version, 5.0, contains 6683...

10.1093/nar/gki078 article EN Nucleic Acids Research 2004-12-17

Article Free Access Share on RoboCup: The Robot World Cup Initiative Authors: Hiroaki Kitano Sony Computer Science Lab., 3-14-13 Higashi-Gotanda, Shinagawa, Tokyo 141 Japan JapanView Profile , Minoru Asada Dept. of Mechanical Engineering, Osaka University, Suita, 565 Yasuo Kuniyoshi Electrotechnical laboratory, 1-1-4 Umezono, Tsukuba, 305 Itsuki Noda Eiichi Osawa Authors Info & Claims AGENTS '97: Proceedings the first international conference Autonomous agentsFebruary 1997 Pages...

10.1145/267658.267738 article EN 1997-01-01

Understanding of the logic and dynamics gene-regulatory biochemical networks is a major challenge systems biology. To facilitate this research topic, we have developed modeling/simulating tool called CellDesigner. CellDesigner primarily has capabilities to visualize, model, simulate networks. Two characteristics embedded in boost its usability create/import/export models: 1) solidly defined comprehensive graphical representation (systems biology notation) network models 2) markup language...

10.1109/jproc.2008.925458 article EN Proceedings of the IEEE 2008-07-24

Increased availability of bioinformatics resources is creating opportunities for the application network pharmacology to predict drug effects and toxicity resulting from multi-target interactions. Here we present a high-precision computational prediction approach that combines two elaborately built machine learning systems multiple molecular docking tools assess binding potentials test compound against proteins involved in complex network. One re-scoring function evaluate modes generated by...

10.1371/journal.pone.0083922 article EN cc-by PLoS ONE 2013-12-31

The Robot World-Cup Soccer (RoboCup) is an attempt to foster AI and intelligent robotics research by providing a standard problem where wide range of technologies can be integrated examined. first RoboCup competition will held at the Fifteenth International Joint Conference on Artificial Intelligence in Nagoya, Japan. A robot team must actually perform soccer game, incorporating various technologies, including design principles autonomous agents, multiagent collaboration, strategy...

10.1609/aimag.v18i1.1276 article EN AI Magazine 1997-03-15
Harukazu Suzuki Alistair R. R. Forrest Erik van Nimwegen Carsten O. Daub Piotr J. Balwierz and 95 more Katharine M. Irvine Timo Lassmann Timothy Ravasi Yuki Hasegawa Michiel de Hoon Shintaro Katayama Kate Schroder Piero Carninci Yasuhiro Tomaru Mutsumi Kanamori-Katayama Atsutaka Kubosaki Altuna Akalin Yoshinari Ando Erik Arner Maki Asada Hiroshi Asahara Timothy L. Bailey Vladimir B. Bajić Denis C. Bauer Anthony G Beckhouse Nicolas Bertin Johan Björkegren Frank Brombacher Erika Bulger Alistair M. Chalk Joe Chiba Nicole Cloonan Adam Dawe Josée Dostie Pär G. Engström Magbubah Essack Geoffrey J. Faulkner J. Lynn Fink David Fredman Ko Fujimori Masaaki Furuno Takashi Gojobori Julian Gough Sean M. Grimmond Mika Gustafsson Megumi Hashimoto Takehiro Hashimoto Mariko Hatakeyama Susanne Heinzel Yoshihide Hayashizaki Oliver Hofmann Michael Hörnquist Łukasz Huminiecki Kazuho Ikeo Naoko Imamoto Satoshi Inoue Yusuke Inoue Ryoko Ishihara Takao Iwayanagi Anders J. Skanderup Mandeep Kaur Hideya Kawaji Markus C. Kerr Ryuichiro Kimura Syuhei Kimura Yasumasa Kimura Hiroaki Kitano Hisashi Koga Toshio Kojima Shinji Kondo T. Konno Anders Krogh Adéle Kruger Ajit Kumar Boris Lenhard Andreas Lennartsson Morten Lindow Marina Lizio Cameron Ross MacPherson Norihiro Maeda Christopher A. Maher Monique Maqungo Jessica C. Mar Nicholas Matigian Hideo Matsuda John S. Mattick Stuart Meier Sei Miyamoto Etsuko Miyamoto‐Sato Kazuhiko Nakabayashi Yutaka Nakachi Mika Nakano Sanne Nygaard Toshitsugu Okayama Yasushi Okazaki Haruka Okuda-Yabukami Valerio Orlando Jun Otomo Mikhail Pachkov Nikolai Petrovsky

10.1038/ng.375 article EN Nature Genetics 2009-04-19

Lenvatinib is a multiple receptor tyrosine kinase inhibitor targeting mainly vascular endothelial growth factor (VEGF) and fibroblast (FGF) receptors. We investigated the immunomodulatory activities of lenvatinib in tumor microenvironment its mechanisms enhanced antitumor activity when combined with programmed cell death-1 (PD-1) blockade. Antitumor was examined immunodeficient immunocompetent mouse models. Single-cell analysis, flow cytometric immunohistochemistry were used to analyze...

10.1371/journal.pone.0212513 article EN cc-by PLoS ONE 2019-02-27
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