Sophia Zhang

ORCID: 0000-0002-8717-8084
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About
Contact & Profiles
Research Areas
  • Pluripotent Stem Cells Research
  • Tissue Engineering and Regenerative Medicine
  • 3D Printing in Biomedical Research
  • Meta-analysis and systematic reviews
  • COVID-19 Clinical Research Studies
  • Congenital heart defects research
  • CRISPR and Genetic Engineering
  • SARS-CoV-2 and COVID-19 Research
  • Cardiac, Anesthesia and Surgical Outcomes
  • Electrospun Nanofibers in Biomedical Applications
  • Clinical practice guidelines implementation
  • Glaucoma and retinal disorders
  • Autoimmune Bullous Skin Diseases
  • Cardiomyopathy and Myosin Studies
  • Bone Tissue Engineering Materials
  • Graphene and Nanomaterials Applications
  • Contact Dermatitis and Allergies
  • Silymarin and Mushroom Poisoning
  • Dermatological diseases and infestations
  • Analytical Chemistry and Chromatography
  • Radiology practices and education
  • Clinical Reasoning and Diagnostic Skills
  • Peptidase Inhibition and Analysis
  • Digital Imaging in Medicine
  • Single-cell and spatial transcriptomics

McMaster University
2024-2025

Washington University in St. Louis
2022-2024

UNSW Sydney
2019-2024

University of North Carolina at Chapel Hill
2024

Impact
2024

Northwestern University
2022-2024

Shirley Ryan AbilityLab
2024

Stanford University
2017-2023

Cardiovascular Institute of the South
2017-2023

Association Clinique et Thérapeutique Infantile du Val de Marne
2023

Background: The progression toward low-cost and rapid next-generation sequencing has uncovered a multitude of variants uncertain significance (VUS) in both patients asymptomatic “healthy” individuals. A VUS is rare or novel variant for which disease pathogenicity not been conclusively demonstrated excluded, thus cannot be definitively annotated. VUS, therefore, pose critical clinical interpretation risk-assessment challenges, new methods are urgently needed to better characterize their...

10.1161/circulationaha.117.032273 article EN Circulation 2018-06-18
Noah Kojima Katherine Adams Wesley H. Self Manjusha Gaglani Tresa McNeal and 95 more Shekhar Ghamande Jay S. Steingrub Nathan I. Shapiro Abhijit Duggal Laurence W. Busse Matthew E. Prekker Ithan D. Peltan Samuel M. Brown David N. Hager Harith Ali Michelle N. Gong Amira Mohamed Matthew C. Exline Akram Khan Jennifer G. Wilson Nida Qadir Steven Y. Chang Adit A. Ginde Cori Withers Nicholas M. Mohr Christopher Mallow Emily T. Martin Adam S. Lauring Nicholas J. Johnson Jonathan D. Casey William B. Stubblefield Kevin W. Gibbs Jennie H. Kwon Adrienne Baughman James D. Chappell Kimberly W. Hart Ian D. Jones Jillian P. Rhoads Sydney A. Swan Kelsey N. Womack Yuwei Zhu Diya Surie Meredith McMorrow Manish M. Patel Mark W. Tenforde Manjusha Gaglani Tresa McNeal Shekhar Ghamande Nicole Calhoun Kempapura Murthy Judy Herrick Amanda McKillop Eric Hoffman Martha Zayed Michael J. Smith Jay S. Steingrub Lori-Ann Kozikowski Lesley De Souza Scott Ouellette Nathan I. Shapiro Michael Bolstad Brianna Coviello Robert A. Ciottone Arnaldo deVilla Ana Grafals Conor Higgins Carlo Ottanelli Kimberly Redman Douglas Scaffidi Alexander Weingart Diya Surie Meredith McMorrow Jennifer DeCuir Natalie J. Thornburg Brendan Flannery Nathaniel M. Lewis Mark W. Tenforde Katherine Adams Manish M. Patel Omar Mehkri Megan Mitchell Zachary Griffith Connery Brennan Kiran Ashok Bryan Poynter Abhijit Duggal Laurence W. Busse Caitlin ten Lohuis Nicholas Stanley Sophia Zhang Matthew E. Prekker Heidi L. Erickson Anne Frosch Audrey Hendrickson Sean Caspers Walker Tordsen Olivia Kaus Tyler Scharber Ithan D. Peltan Samuel M. Brown

Abstract Introduction Understanding the changing epidemiology of adults hospitalized with coronavirus disease 2019 (COVID-19) informs research priorities and public health policies. Methods Among (≥18 years) laboratory-confirmed, acute COVID-19 between 11 March 2021, 31 August 2022 at 21 hospitals in 18 states, those during severe respiratory syndrome 2 (SARS-CoV-2) Omicron-predominant period (BA.1, BA.2, BA.4/BA.5) were compared to from earlier Alpha- Delta-predominant periods. Demographic...

10.1093/cid/ciad276 article EN public-domain Clinical Infectious Diseases 2023-05-31

Perhaps one of the most significant achievements in modern science is discovery human induced pluripotent stem cells (hiPSCs), which have paved way for regeneration therapy using patients' own cells. Cardiomyocytes differentiated from hiPSCs (hiPSC-CMs) could be used modelling patients with heart failure, testing new drugs, and cellular future. However, present cardiomyocyte differentiation protocols exhibit variable efficiency across different hiPSC lines, inhibit application this...

10.1371/journal.pone.0053764 article EN cc-by PLoS ONE 2013-01-10

Rationale: Previous studies have shown that human embryonic stem cell-derived cardiomyocytes improved myocardial recovery when administered to infarcted pig and non-human primate hearts.However, the engraftment of intramyocardially delivered cells is poor effectiveness clinically relevant doses induced pluripotent (hiPSC-CMs) in large animal models injury remains unknown.Here, we determined whether thymosin β4 (Tb4) could improve reparative potency transplanted hiPSC-CMs a porcine model...

10.7150/thno.56757 article EN cc-by Theranostics 2021-01-01

The fundamental question of which genes are most important in controlling liver regeneration remains unanswered. We employed a parallel screen to test the impact 43 selected on repopulation Fah(-/-) mouse model hereditary tyrosinemia. discovered that transcription factor Foxa3 was strong promoter regeneration, while tumor necrosis receptor 1 (TNFR1) significant suppressor among all tested. Our approach enabled identification these factors as regulators and potential drug targets for...

10.1101/gad.258855.115 article EN Genes & Development 2015-05-01

Abstract Purpose Large language models have shown promise in answering questions related to medical conditions. This study evaluated the responses of ChatGPT-4 patient-centred frequently asked (FAQs) relevant age-related macular degeneration (AMD). Methods Ten experts across a range clinical, education and research practices optometry ophthalmology. Over 200 patient-centric FAQs from authoritative professional society, hospital advocacy websites were condensed into 37 four themes:...

10.1038/s41433-025-03788-0 article EN cc-by Eye 2025-04-15

A short inflammatory phase and fast ingrowth of blood vessels mesenchymal cells are essential for tissue integration a biomaterial. Macrophages play key role in this process. We investigated invasion macrophages, vessels, proliferating into highly porous volume-stable collagen matrix (VCMX) used soft augmentation around teeth dental implants. The biomaterial was implanted submucosal pouches the canine maxilla, response analyzed at six different time points. Immunohistochemistry done (PCNA),...

10.3390/ma12223721 article EN Materials 2019-11-11

Collagen-based scaffolds hold great potential for tissue engineering, since they closely mimic the extracellular matrix. We investigated integration of an engineered porous collagen-elastin scaffold developed soft augmentation. After implantation in maxillary submucosal pouches 6 canines, cell invasion (vimentin), matrix deposition (collagen type I) and degradation (cathepsin k, tartrate-resistant acid phosphatase (TRAP), CD86) were (immuno)-histochemically evaluated. Invasion vimentin+...

10.3390/ma13102420 article EN Materials 2020-05-25

Mutational outcomes following CRISPR-Cas9-nuclease cutting in mammalian cells have recently been shown to be predictable and, certain cases, skewed toward single genotypes. However, the ability control these remains limited, especially for 1-bp insertions, a common and therapeutically relevant class of repair outcomes. Here, through small molecule screen, we identify ATM kinase inhibitor KU-60019 as compound capable reproducibly increasing fraction insertions relative other Cas9 Small or...

10.1038/s41467-021-25415-8 article EN cc-by Nature Communications 2021-08-25

The application of teledermatology for evaluating acne patients has yielded comparable therapeutic outcomes with traditional face-to-face evaluation, but follow-up compliance between these modalities is not well-studied. Our objective to compare the rate and duration initially evaluated by versus in-person outpatient consultation. Electronic medical review patients, 18-35 years-old seen via evaluation at University Pittsburgh Medical Center 2010-2018 was performed. Teledermatology were less...

10.5070/d3264048339 article EN cc-by-nc-nd Dermatology Online Journal 2020-01-01

Introduction: Neuroendocrine/small‐cell prostate cancer (NEPC) is a rare and aggressive subtype of cancer, which typically develops after prolonged treatment for metastatic castration‐resistant disease, but can, less commonly, occur de novo. Case Presentation: We describe case novo NEPC in tumor with mixed pathology including acinar adenocarcinoma neuroendocrine/small‐cell carcinoma rapid progression disease. Despite initiation androgen deprivation therapy (ADT) chemotherapy, the patient...

10.1155/2024/7998149 article EN cc-by Case Reports in Oncological Medicine 2024-01-01

Rationale: Regulatory DNA elements in the human genome play important roles determining transcriptional abundance and spatiotemporal gene expression during embryonic heart development somatic cell reprogramming. It is not well known how chromatin marks regulatory are modulated to establish type–specific heart. Objective: We aimed decipher epigenetic signatures they modulate heart-specific expression. Methods Results: profiled genome-wide activity a variety of using massive RNA-seq (n=12)...

10.1161/circresaha.117.311367 article EN Circulation Research 2017-10-14

To evaluate the agreement and accuracy of grading goniophotographs anterior segment optical coherence tomography (AS-OCT) results for assessment chamber angle, elicit factors driving concordance between perceived grade ground truth.Three clinicians evaluated AS-OCT 75 patients. Graders' impressions angle grade, trabecular pigmentation, iris contour were compared with truth gonioscopic examination result when physically performed by a senior optometrist. Percentage kappa statistics...

10.1167/tvst.8.5.16 article EN cc-by-nc-nd Translational Vision Science & Technology 2019-09-20

Introduction The aim of this methodological review is to evaluate the completeness reporting surgical pilot and feasibility randomised trials as per Consolidated Standards Reporting Trials (CONSORT) extension trials. Moreover, we assess for presence spin inconsistency between abstract main text in Methods analysis A comprehensive, electronic search strategy will be used identify studies indexed Medline, Embase Cochrane Central Register Controlled (CENTRAL) databases. Studies included if they...

10.1136/bmjopen-2024-085293 article EN cc-by-nc BMJ Open 2024-04-01

This study presents a method based on acid transesterification and the purification by solid-phase extraction (SPE) coupled with gas chromatography–tandem mass spectrometry for quantifying 3- 2-monochloropropanediol esters (3-MCPDE, 2-MCPDE) glycidyl (GE) in nutritional foods. The fat was extracted liquid–liquid petroleum ether diethyl after sample hydrolysed ammonia. Then extract purified SPE cartridge filled aminopropyl sorbents. It demonstrated that optimal elution volume 3-MCPDE, 2-MCPDE...

10.1080/19440049.2024.2353796 article EN Food Additives & Contaminants Part A 2024-05-28
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