Katriina Aalto‐Setälä

ORCID: 0000-0003-0334-2172
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About
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Research Areas
  • Pluripotent Stem Cells Research
  • Cardiac electrophysiology and arrhythmias
  • Neuroscience and Neural Engineering
  • 3D Printing in Biomedical Research
  • Lipoproteins and Cardiovascular Health
  • Cell Image Analysis Techniques
  • Cardiomyopathy and Myosin Studies
  • Tissue Engineering and Regenerative Medicine
  • Ion channel regulation and function
  • Cancer, Lipids, and Metabolism
  • CRISPR and Genetic Engineering
  • Diabetes, Cardiovascular Risks, and Lipoproteins
  • ECG Monitoring and Analysis
  • Genetics, Bioinformatics, and Biomedical Research
  • Genetic Associations and Epidemiology
  • Congenital heart defects research
  • Receptor Mechanisms and Signaling
  • Cardiac pacing and defibrillation studies
  • Cholesterol and Lipid Metabolism
  • Cardiovascular Function and Risk Factors
  • Lipid metabolism and disorders
  • Electrospun Nanofibers in Biomedical Applications
  • RNA Research and Splicing
  • Nutrition, Genetics, and Disease
  • Cardiovascular Effects of Exercise

Tampere University
2016-2025

Tampere University Hospital
2015-2024

Pirkanmaa Hospital District
2022

FIT Biotech (Finland)
2012-2017

Tampere University of Applied Sciences
2006-2017

King's College London
2016

Hospital General Universitario Gregorio Marañón
2016

University College Hospital at Westmoreland Street
2015

University College London
2015

Gladstone Institutes
2009-2014

Mitja Kurki Juha Karjalainen Priit Palta Timo P. Sipilä Kati Kristiansson and 95 more Kati Donner Mary Pat Reeve Hannele Laivuori Mervi Aavikko Mari Kaunisto Anu Loukola Elisa Lahtela Hannele Mattsson Päivi Laiho Pietro Della Briotta Parolo Arto Lehistö Masahiro Kanai Nina Mars Joel Rämö Tuomo Kiiskinen Henrike Heyne Kumar Veerapen Sina Rüeger Susanna Lemmelä Wei Zhou Sanni Ruotsalainen Kalle Pärn Tero Hiekkalinna Sami Koskelainen Teemu Paajanen Vincent Llorens Javier Gracia‐Tabuenca Harri Siirtola Kadri Reis Abdelrahman G. Elnahas Benjamin B. Sun Christopher N. Foley Katriina Aalto‐Setälä Kaur Alasoo Mikko Arvas Kirsi Auro Shameek Biswas Argyro Bizaki-Vallaskangas Olli Carpén Chia‐Yen Chen Oluwaseun Alexander Dada Zhihao Ding Margaret G. Ehm Kari K. Eklund Martti Färkkilâ Hilary K. Finucane Andrea Ganna Awaisa Ghazal Robert Graham Eric M. Green Antti Hakanen Marco Hautalahti Åsa K. Hedman Mikko Hiltunen Reetta Hinttala Iiris Hovatta Xinli Hu Adriana Huertas‐Vázquez Laura Huilaja Julie Hunkapiller Howard Jacob Jan-Nygaard Jensen Heikki Joensuu Sally John Valtteri Julkunen Marc Jung Juhani Junttila Kai Kaarniranta Mika Kähönen Risto Kajanne Lila Kallio Reetta Kälviäinen Jaakko Kaprio Nurlan Kerimov Johannes Kettunen Elina Kilpeläinen Terhi Kilpi K. Klinger Veli‐Matti Kosma Teijo Kuopio Venla Kurra Triin Laisk Jari A. Laukkanen Nathan Lawless Aoxing Liu Simonne Longerich Reedik Mägi Johanna Mäkelä Antti Mäkitie Anders Mälarstig Graham J. Mann Joseph Maranville Athena Matakidou Tuomo J Meretoja Sahar V. Mozaffari

Abstract Population isolates such as those in Finland benefit genetic research because deleterious alleles are often concentrated on a small number of low-frequency variants (0.1% ≤ minor allele frequency < 5%). These survived the founding bottleneck rather than being distributed over large ultrarare variants. Although this effect is well established Mendelian genetics, its value common disease genetics less explored 1,2 . FinnGen aims to study genome and national health register data...

10.1038/s41586-022-05473-8 article EN cc-by Nature 2023-01-18

Hypertriglyceridemia is common in the general population, but its mechanism largely unknown. In previous work human apo CIII transgenic (HuCIIITg) mice were found to have elevated triglyceride levels. this report, for hypertriglyceridemia was studied. Two different HuCIIITg mouse lines used: a low expressor line with serum triglycerides of approximately 280 mg/dl, and high 1,000 mg/dl. Elevated mainly VLDL. VLDL particles 1.5 times more triglyceride-rich than controls. The total amount...

10.1172/jci116066 article EN Journal of Clinical Investigation 1992-11-01
Mitja Kurki Juha Karjalainen Priit Palta Timo P. Sipilä Kati Kristiansson and 95 more Kati Donner Mary Pat Reeve Hannele Laivuori Mervi Aavikko Mari Kaunisto Anu Loukola Elisa Lahtela Hannele Mattsson Päivi Laiho Pietro Della Briotta Parolo Arto Lehistö Masahiro Kanai Nina Mars Joel Rämö Tuomo Kiiskinen Henrike Heyne Kumar Veerapen Sina Rüeger Susanna Lemmelä Wei Zhou Sanni Ruotsalainen Kalle Pärn Tero Hiekkalinna Sami Koskelainen Teemu Paajanen Vincent Llorens Javier Gracia‐Tabuenca Harri Siirtola Kadri Reis Abdelrahman G. Elnahas Katriina Aalto‐Setälä Kaur Alasoo Mikko Arvas Kirsi Auro Shameek Biswas Argyro Bizaki-Vallaskangas Olli Carpén Chia‐Yen Chen Oluwaseun Alexander Dada Zhihao Ding Margaret G. Ehm Kari K. Eklund Martti Färkkilâ Hilary K. Finucane Andrea Ganna Awaisa Ghazal Robert Graham Eric Green Antti Hakanen Marco Hautalahti Åsa K. Hedman Mikko Hiltunen Reetta Hinttala Iiris Hovatta Xinli Hu Adriana Huertas‐Vázquez Laura Huilaja Julie Hunkapiller Howard J. Jacob Jan-Nygaard Jensen Heikki Joensuu Sally John Valtteri Julkunen Marc Jung Juhani Junttila Kai Kaarniranta Mika Kähönen Risto Kajanne Lila Kallio Reetta Kälviäinen Jaakko Kaprio Nurlan Kerimov Johannes Kettunen Elina Kilpeläinen Terhi Kilpi K. Klinger Veli‐Matti Kosma Teijo Kuopio Venla Kurra Triin Laisk Jari A. Laukkanen Nathan Lawless Aoxing Liu Simonne Longerich Reedik Mägi Johanna Mäkelä Antti Mäkitie Anders Mälarstig Arto Mannermaa Joseph Maranville Athena Matakidou Tuomo J Meretoja Sahar V. Mozaffari Mari Niemi Marianna Niemi

ABSTRACT Population isolates such as Finland provide benefits in genetic studies because the allelic spectrum of damaging alleles any gene is often concentrated on a small number low-frequency variants (0.1% ≤ minor allele frequency < 5%), which survived founding bottleneck, opposed to being distributed over much larger ultra--rare variants. While this advantage well-- established Mendelian genetics, its value common disease genetics has been less explored. FinnGen aims study genome and...

10.1101/2022.03.03.22271360 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2022-03-06

Long QT syndrome (LQTS) is caused by functional alterations in cardiac ion channels and associated with prolonged repolarization time increased risk of ventricular arrhythmias. Inherited type 2 LQTS (LQT2) drug-induced both result from altered function the hERG channel. We investigated whether electrophysiological characteristics LQT2 can be recapitulated vitro using induced pluripotent stem cell (iPSC) technology. Spontaneously beating cardiomyocytes were differentiated two iPSC lines...

10.1242/dmm.008409 article EN cc-by Disease Models & Mechanisms 2011-11-04

Lipoprotein lipase (LPL)-deficient mice have been created by gene targeting in embryonic stem cells. At birth, homozygous knockout pups threefold higher triglycerides and sevenfold VLDL cholesterol levels than controls. When permitted to suckle, LPL-deficient become pale, then cyanotic, finally die at approximately 18 h of age. Before death, triglyceride are severely elevated (15,087 +/- 3,805 vs 188 71 mg/dl controls). Capillaries tissues engorged with chylomicrons. This is especially...

10.1172/jci118319 article EN Journal of Clinical Investigation 1995-12-01

Arterial smooth muscle cell (SMC) migration and proliferation are central features in atherogenesis. Altered gene expression atherosclerotic lesions have some similar characteristics with certain solid tumors thus might mechanisms that lead to SMC proliferation. Among cancer cells common genome-wide hypomethylation which correlates transformation tumor progression, coincident over-expression of methyltransferase (MTase). The purpose the present study was analyze whether alterations DNA...

10.1191/1358863x02vm418oa article EN Vascular Medicine 2002-02-01

The low‐molecular‐mass insulin‐like growth factor‐binding protein (IGF‐BP) and placental 12 (PP12) are identical proteins that present in human serum, amniotic fluid, secretory endometrium decidua. IGF‐BP/PP12 is believed to act as an autocrine or paracrine regulator of cell growth. A cDNA clone encompassing the entire coding region this was isolated from a decidual library. authenticity verified by vitro transcription/translation experiments identity 10 N‐terminal amino acids deduced for...

10.1016/0014-5793(88)80041-3 article EN FEBS Letters 1988-08-29

Background The growth of stem cells in vitro conditions requires optimal balance between signals mediating cell survival, proliferation, and self-renewal. For clinical application cells, the use completely defined elimination all animal-derived materials from establishment, culture, differentiation processes is desirable. Methodology/Principal Findings Here, we report development a fully xeno-free medium (RegES), capable supporting expansion human embryonic (hESC), induced pluripotent (iPSC)...

10.1371/journal.pone.0010246 article EN cc-by PLoS ONE 2010-04-19

Induced pluripotent stem cells (iPSC) provide means to study the pathophysiology of genetic disorders. Catecholaminergic polymorphic ventricular tachycardia (CPVT) is a malignant inherited ion channel disorder predominantly caused by mutations in cardiac ryanodine receptor (RyR2). In this cellular characteristics CPVT are investigated and whether electrophysiological features mutation can be mimicked using iPSC -derived cardiomyocytes (CM).Spontaneously beating CMs were differentiated from...

10.1371/journal.pone.0044660 article EN cc-by PLoS ONE 2012-09-04

The ability of human pluripotent stem cells to differentiate towards the cardiac lineage has attracted significant interest, initially with a strong focus on regenerative medicine. ultimate goal repair heart by cardiomyocyte replacement has, however, proven challenging. Human differentiation been difficult control, but methods are improving, and process, certain extent, can be manipulated directed. cell-derived cardiomyocytes described date exhibit rather immature functional structural...

10.4061/2011/383709 article EN cc-by Stem Cells International 2011-01-01

Long-QT syndrome mutations can cause syncope and sudden death by prolonging the cardiac action potential (AP). Ion channels affected are various, influences of cellular calcium cycling on LQTS events unknown. To better understand arrhythmias, we performed current-clamp intracellular ([Ca(2+)]i) measurements cardiomyocytes differentiated from patient-derived induced pluripotent stem cells (iPS-CM). In myocytes carrying an LQT2 mutation (HERG-A422T), APs [Ca(2+)]i transients were prolonged in...

10.1016/j.stemcr.2014.06.003 article EN cc-by-nc-nd Stem Cell Reports 2014-07-04

Catecholaminergic polymorphic ventricular tachycardia (CPVT) is a highly malignant inherited arrhythmogenic disorder. Type 1 CPVT (CPVT1) caused by cardiac ryanodine receptor (RyR2) gene mutations resulting in abnormal calcium release from sarcoplasmic reticulum. Dantrolene, an inhibitor of Ca2+ release, has been shown to rescue this vitro. We assessed the antiarrhythmic efficacy dantrolene six patients carrying various RyR2 causing CPVT. The underwent exercise stress test before and after...

10.1371/journal.pone.0125366 article EN cc-by PLoS ONE 2015-05-08
Hanna M. Ollila Eilon Sharon Ling Lin Nasa Sinnott-Armstrong Aditya Ambati and 95 more Selina Yogeshwar Ryan P. Hillary Otto Jolanki Juliette Faraco Mali Einen Guo Luo Jing Zhang Fang Han Han Yan Xiao Song Dong Jing Li Jun Zhang Seung‐Chul Hong Tae Won Kim Yves Dauvilliers Lucie Barateau Gert Jan Lammers Rolf Fronczek Geert Mayer Joan Santamaría Isabelle Arnulf Stine Knudsen May Kristin Lyamouri Bredahl Per Medbøe Thorsby Giuseppe Plazzi Fabio Pizza Monica Moresco Catherine Crowe Stephen K. Van Den Eeden Michel Lecendreux Patrice Bourgin Takashi Kanbayashi F Martínez-Orozco Rosa Peraita‐Adrados Antonio Benetó Jacques Montplaisir Alex Désautels Yu‐Shu Huang Thomas D. Als Adam Ziemann Ali Abbasi Anne Lehtonen Apinya Lertratanakul Bridget Riley‐Gillis Fedik Rahimov Howard J. Jacob Jeffrey F. Waring Mengzhen Liu Nizar Smaoui Relja Popovic Adam Platt Athena Matakidou Benjamin Challis Dirk S. Paul Glenda Lassi Ioanna Tachmazidou Antti Hakanen Johanna Schleutker Nina Pitkänen Perttu Terho Petri Virolainen Arto Mannermaa Veli‐Matti Kosma Chia‐Yen Chen Heiko Runz Sally John Sanni Lahdenperä Stephanie Loomis Susan Eaton George Okafo Heli Salminen‐Mankonen Marc Jung Nathan Lawless Zhihao Ding Joseph Maranville Marla Hochfeld Robert Plenge Shameek Biswas Masahiro Kanai Mutaamba Maasha Wei Zhou Outi Tuovila Raimo Pakkanen Jari A. Laukkanen Teijo Kuopio Kristiina Aittomäki Antti Mäkitie Natalia Pujol Triin Laisk Katriina Aalto‐Setälä Johanna Mäkelä Marco Hautalahti Sarah Smith Tom Southerington Eeva Kangasniemi

Narcolepsy type 1 (NT1) is caused by a loss of hypocretin/orexin transmission. Risk factors include pandemic 2009 H1N1 influenza A infection and immunization with Pandemrix®. Here, we dissect disease mechanisms interactions environmental triggers in multi-ethnic sample 6,073 cases 84,856 controls. We fine-mapped GWAS signals within HLA (DQ0602, DQB1*03:01 DPB1*04:02) discovered seven novel associations (CD207, NAB1, IKZF4-ERBB3, CTSC, DENND1B, SIRPG, PRF1). Significant at TRA DQB1*06:02 loci...

10.1038/s41467-023-36120-z article EN cc-by Nature Communications 2023-05-15
Nina Mars Sini Kerminen Max Tamlander Matti Pirinen Eveliina Jakkula and 95 more Kirsimari Aaltonen Tuomo J Meretoja Sirpa Heinävaara Elisabeth Widén Samuli Ripatti Aarno Palotie Mark J. Daly Bridget Riley-Gills Howard Jacob Dirk S. Paul Athena Matakidou Adam Platt Heiko Runz Sally John George Okafo Nathan Lawless Robert M. Plenge Joseph Maranville Mark I. McCarthy Julie Hunkapiller Margaret G. Ehm Kirsi Auro Simonne Longerich Caroline S. Fox Anders Mälarstig K. Klinger Deepak Raipal Eric Green Robert Graham Robert Yang Chris O’Donnell Tomi P. Mäkelä Jaakko Kaprio Petri Virolainen Antti Hakanen Terhi Kilpi Markus Perola Jukka Partanen Anne Pitkäranta Juhani Junttila Raisa Serpi Tarja Laitinen Veli‐Matti Kosma Jari A. Laukkanen Marco Hautalahti Outi Tuovila Raimo Pakkanen Jeffrey F. Waring Bridget Riley‐Gillis Fedik Rahimov Ioanna Tachmazidou Chia‐Yen Chen Heiko Runz Zhihao Ding Marc Jung Shameek Biswas Rion Pendergrass Julie Hunkapiller Margaret G. Ehm David Pulford Neha Raghavan Adriana Huertas‐Vázquez Jae-Hoon Sul Anders Mälarstig Xinli Hu K. Klinger Robert Graham Eric Green Sahar V. Mozaffari Dawn Waterworth Nicole Renaud Ma’en Obeidat Samuli Ripatti Johanna Schleutker Markus Perola Mikko Arvas Olli Carpén Reetta Hinttala Johannes Kettunen Graham J. Mann Katriina Aalto‐Setälä Mika Kähönen Jari A. Laukkanen Johanna Mäkelä Reetta Kälviäinen Valtteri Julkunen Hilkka Soininen Anne M. Remes Mikko Hiltunen Jukka Peltola Minna Raivio Pentti Tienari Juha O. Rinne Roosa Kallionpää Juulia Partanen

PURPOSE Family history (FH) and pathogenic variants (PVs) are used for guiding risk surveillance in selected high-risk women but little is known about their impact breast cancer screening on population level. In addition, polygenic scores (PRSs) have been shown to efficiently stratify through combining information common genetic factors into one measure. METHODS longitudinal real-life data, we evaluate PRS, FH, PVs stratified screening. Using FinnGen (N = 117,252), linked the Mass Screening...

10.1200/jco.23.00295 article EN cc-by-nc-nd Journal of Clinical Oncology 2024-02-29

The recent development of human induced pluripotent stem (iPS) cells [1–5] has reshaped the scientific and political landscape cell biology. iPS provide an unprecedented opportunity to study pathophysiology diseases, understand biology, identify new therapeutic targets, test therapies. Furthermore, they offer possibility transplanting that are genetically identical their recipient. iPS not included in heated debates over ethics embryonic research because embryos or oocytes used....

10.1371/journal.pbio.1000042 article EN cc-by PLoS Biology 2009-02-20

The functionality of a cardiomyocyte is primarily measured by analyzing the electrophysiological properties cell. analysis beating behavior single cardiomyocytes, especially ones derived from stem cells, challenging but well warranted. In this study, video-based method that non-invasive and label-free introduced applied for study human cardiomyocytes induced pluripotent cells. dissociated cell-derived was visualized with microscope motion video-recorded. Minimum quadratic difference, digital...

10.1186/1475-925x-13-39 article EN cc-by BioMedical Engineering OnLine 2014-01-01

Hypertrophic cardiomyopathy (HCM) is a genetic cardiac disease, which affects the structure of heart muscle tissue. The clinical symptoms include arrhythmias, progressive failure, and even sudden death but mutation carrier can also be totally asymptomatic. To date, over 1400 mutations have been linked to HCM, mostly in genes encoding for sarcomeric proteins. However, pathophysiological mechanisms disease are still largely unknown. Two founder HCM Finland located myosin‐binding protein C (...

10.1155/2016/1684792 article EN cc-by Stem Cells International 2015-12-28

To promote the transition of cell cultures from 2D to 3D, hydrogels are needed biomimic extracellular matrix (ECM). One potential material for this purpose is gellan gum (GG), a biocompatible and mechanically tunable hydrogel. However, GG alone does not provide attachment sites cells thrive in 3D. option biofunctionalization introduction gelatin, derivative abundant ECM protein collagen. Unfortunately, gelatin lacks cross-linking moieties, making production self-standing difficult under...

10.1021/acsami.8b22343 article EN cc-by ACS Applied Materials & Interfaces 2019-05-23

The growing importance of human induced pluripotent stem cell-derived cardiomyoyctes (hiPSC-CMs), as patient-specific and disease-specific models for studying cellular cardiac electrophysiology or preliminary cardiotoxicity tests, generated better understanding hiPSC-CM biophysical mechanisms great amount action potential calcium transient data. In this paper, we propose a new in silico model, with particular attention to Ca2+ handling. We used i) the Paci2013 model starting point, ii)...

10.3389/fphys.2018.00709 article EN cc-by Frontiers in Physiology 2018-06-26

Dilated cardiomyopathy (DCM) is one of the leading causes heart failure and transplantation. A portion familial DCM due to mutations in LMNA gene encoding nuclear lamina proteins lamin C without adequate treatment these patients have a poor prognosis. To get better insights into pathobiology behind this disease, we focused on modeling LMNA-related using human induced pluripotent stem cell derived cardiomyocytes (hiPSC-CM). Primary skin fibroblasts from carrying most prevalent Finnish founder...

10.3390/cells8060594 article EN cc-by Cells 2019-06-15
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