David A. Lomas

ORCID: 0000-0003-2339-6979
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About
Contact & Profiles
Research Areas
  • Protease and Inhibitor Mechanisms
  • Peptidase Inhibition and Analysis
  • Blood Coagulation and Thrombosis Mechanisms
  • Endoplasmic Reticulum Stress and Disease
  • Signaling Pathways in Disease
  • Cellular transport and secretion
  • Chronic Obstructive Pulmonary Disease (COPD) Research
  • Metabolism and Genetic Disorders
  • Calpain Protease Function and Regulation
  • Long-Term Effects of COVID-19
  • Insect Resistance and Genetics
  • Asthma and respiratory diseases
  • Lysosomal Storage Disorders Research
  • Coagulation, Bradykinin, Polyphosphates, and Angioedema
  • Neurological diseases and metabolism
  • Intensive Care Unit Cognitive Disorders
  • Enzyme Production and Characterization
  • Pediatric health and respiratory diseases
  • Genetics and Neurodevelopmental Disorders
  • Biochemical and Molecular Research
  • Ubiquitin and proteasome pathways
  • Silk-based biomaterials and applications
  • Amino Acid Enzymes and Metabolism
  • Pulmonary Hypertension Research and Treatments
  • Protein Hydrolysis and Bioactive Peptides

University College London
2016-2025

Institute of Structural and Molecular Biology
2015-2025

Queen Elizabeth Hospital
2024

University College Hospital
2020-2024

Birkbeck, University of London
2013-2024

University Hospitals Birmingham NHS Foundation Trust
2024

University of Birmingham
2023

National Institute for Health Research
2021-2023

Imperial College London
2023

Newcastle University
2023

Human induced pluripotent stem (iPS) cells hold great promise for advancements in developmental biology, cell-based therapy, and modeling of human disease. Here, we examined the use iPS inherited metabolic disorders liver. Dermal fibroblasts from patients with various diseases liver were used to generate a library patient-specific cell lines. Each line was differentiated into hepatocytes using what believe be novel 3-step differentiation protocol chemically defined conditions. The resulting...

10.1172/jci43122 article EN Journal of Clinical Investigation 2010-08-25
Phuwanat Sakornsakolpat Dmitry Prokopenko Maxime Lamontagne Nicola Reeve Anna L. Guyatt and 95 more Victoria E. Jackson Nick Shrine Dandi Qiao Traci M. Bartz Deog Kyeom Kim Mi Kyeong Lee Jeanne C. Latourelle Xingnan Li Jarrett D. Morrow Ma’en Obeidat Annah B. Wyss Per Bakke R. Graham Barr Terri H. Beaty Steven A. Belinsky Guy Brusselle James D. Crapo Kim de Jong Dawn L. DeMeo Tasha E. Fingerlin Sina A. Gharib Amund Gulsvik Ian P. Hall John E. Hokanson Woo Jin Kim David A. Lomas Stephanie J. London Deborah A. Meyers George O'connor Stephen I. Rennard David A. Schwartz Paweł Śliwiński David Sparrow David P. Strachan Ruth Tal‐Singer Yohannes Tesfaigzi Jørgen Vestbo Judith M. Vonk Jae‐Joon Yim Xiaobo Zhou Yohan Bossé Ani Manichaikul Lies Lahousse Edwin K. Silverman H. Marike Boezen Louise V. Wain Martin D. Tobin Brian D. Hobbs Michael H. Cho Nick Shrine Anna L. Guyatt Chiara Batini Jing Hua Zhao Matthias Wielscher Stefan Weiß Katherine A. Kentistou James P. Cook Jennie Hui Stefan Karrasch Medea Imboden Sarah E. Harris Jonathan Marten Stefan Enroth Shona M. Kerr Ida Surakka Véronique Vitart Terho Lehtimäki Ralf Ewert Christian Gieger Georg Homuth Peter K. Joshi Claudia Langenberg Lars Lind Jian’an Luan Anubha Mahajan Alison D. Murray David J. Porteous Rajesh Rawal Blair H. Smith Paul R. H. J. Timmers Olli Raitakari Mika Kähönen Ozren Polašek Ulf Gyllensten Igor Rudan Ian J. Deary Nicole Probst‐Hensch Holger Schulz Anthony James James F. Wilson Beate Stubbe Eleftheria Zeggini Marjo‐Riitta Järvelin Nicholas J. Wareham Caroline Hayward

10.1038/s41588-018-0342-2 article EN Nature Genetics 2019-02-25

The mutation in the Z deficiency variant of α<sub>1</sub>-antitrypsin perturbs structure protein to allow a unique intermolecular linkage. These loop-sheet polymers are retained within endoplasmic reticulum hepatocytes form inclusions that associated with neonatal hepatitis, juvenile cirrhosis, and hepatocellular carcinoma. process polymer formation has been investigated here by intrinsic tryptophan fluorescence, fluorescence polarization, circular dichroic spectra extrinsic...

10.1074/jbc.274.14.9548 article EN cc-by Journal of Biological Chemistry 1999-04-01

<h3>Background:</h3> Circulating levels of Clara cell secretory protein-16 (CC-16) have been linked to toxicity. It has therefore suggested that this protein may be a useful marker chronic obstructive pulmonary disease (COPD). <h3>Methods:</h3> Serum CC-16 were measured in 2083 individuals aged 40–75 years with COPD and smoking history ⩾10 pack-years, 332 controls pack-years normal lung function 237 non-smoking controls. <h3>Results:</h3> had coefficient repeatability 2.90 over 3 months...

10.1136/thx.2008.102574 article EN Thorax 2008-05-20

The serine proteinase inhibitors, or serpins, are a superfamily of proteins that found in wide range species, including plants, viruses, and humans.The family includes as diverse α 1 -antichymotrypsin, C1 inhibitor, antithrombin, plasminogen activator inhibitor-1, which have key regulatory functions the inflammatory, complement, coagulation, fibrinolytic cascades.Members serpin characterized by more than 30% sequence homology with -antitrypsin conservation tertiary structure.The structure is...

10.1172/jci0216782 article EN Journal of Clinical Investigation 2002-12-01

Abstract Alpha1-antitrypsin is the most abundant circulating protease inhibitor. The severe Z deficiency allele (Glu342Lys) causes protein to undergo a conformational transition and form ordered polymers that are retained within hepatocytes. This neonatal hepatitis, cirrhosis, hepatocellular carcinoma. We have developed conformation-specific monoclonal antibody (2C1) recognizes pathological formed by α1-antitrypsin. was used characterize variant novel shutter domain mutant (His334Asp;...

10.1002/hep.23760 article EN Hepatology 2010-05-14

The serpinopathies result from the ordered polymerization of mutants members serine proteinase inhibitor (serpin) superfamily. These polymers are retained within cell synthesis where they cause a toxic gain function. exemplified by inclusions that form with common severe Z mutant α 1 -antitrypsin associated liver cirrhosis. There is considerable controversy as to pathway serpin and structure pathogenic disease. We have used synthetic peptides, limited proteolysis, monoclonal antibodies, ion...

10.1073/pnas.1004785107 article EN Proceedings of the National Academy of Sciences 2010-09-20

Point mutants of alpha1-antitrypsin (α1AT) form ordered polymers that are retained as inclusions within the endoplasmic reticulum (ER) hepatocytes in association with neonatal hepatitis, cirrhosis, and hepatocellular carcinoma. These cause cell damage predispose to ER stress absence classical unfolded protein response (UPR). The pathophysiology underlying this was explored by generating models conditionally express wild-type (WT) α1AT, two polymer-mediated liver disease (E342K [the Z allele]...

10.1002/hep.26173 article EN Hepatology 2012-11-29

Neutrophil elastase (NE) is released by activated neutrophils during an inflammatory response and exerts proteolytic activity on elastin other extracellular matrix components. This protease rapidly inhibited the plasma serine inhibitor alpha‐1‐antitrypsin (AAT), importance of this protective lung tissue highlighted development early onset emphysema in individuals with AAT deficiency. As a serpin, presents surface‐exposed reactive centre loop (RCL) whose sequence mirrors target specificity....

10.1111/febs.17387 article EN cc-by FEBS Journal 2025-01-08

The serpins are a family of proteinase inhibitors that play central role in the control proteolytic cascades. Their inhibitory mechanism depends on intramolecular insertion reactive loop into β-sheet A after cleavage by target proteinase. Point mutations within protein can allow aberrant conformational transitions characterized β-strand exchange between one molecule and another. These loop-sheet polymers result diseases as varied cirrhosis, emphysema, angio-oedema, thrombosis, we recently...

10.1073/pnas.97.1.67 article EN Proceedings of the National Academy of Sciences 2000-01-04

Conformational diseases such as amyloidosis, Alzheimer's disease, prion diseases, and the serpinopathies are all caused by structural rearrangements within a protein that transform it into pathological species. These typified Z variant of α<sub>1</sub>-antitrypsin (E342K), which causes retention hepatocytes inclusion bodies associated with neonatal hepatitis cirrhosis. The result from mutation perturbing conformation protein, facilitates sequential interaction between reactive center loop...

10.1074/jbc.c100722200 article EN cc-by Journal of Biological Chemistry 2002-03-01
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