Nobuhiro Koyama

ORCID: 0000-0002-3800-2541
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About
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Research Areas
  • Microbial Natural Products and Biosynthesis
  • Mycobacterium research and diagnosis
  • Antimicrobial Resistance in Staphylococcus
  • Lipid metabolism and biosynthesis
  • Metabolomics and Mass Spectrometry Studies
  • Antibiotic Resistance in Bacteria
  • Genomics and Phylogenetic Studies
  • Infectious Diseases and Mycology
  • Plant-Microbe Interactions and Immunity
  • Microbial Metabolism and Applications
  • Amino Acid Enzymes and Metabolism
  • Antifungal resistance and susceptibility
  • Bioactive Compounds and Antitumor Agents
  • Glycosylation and Glycoproteins Research
  • Microbial Metabolic Engineering and Bioproduction
  • Tuberculosis Research and Epidemiology
  • Antimicrobial Peptides and Activities
  • Fungal Biology and Applications
  • Bone Metabolism and Diseases
  • Quinazolinone synthesis and applications
  • Fungal Plant Pathogen Control
  • Sphingolipid Metabolism and Signaling
  • Metabolism and Genetic Disorders
  • Heterotopic Ossification and Related Conditions
  • Insects and Parasite Interactions

Kitasato University
2012-2024

University of Montana
2014-2016

University of California, San Diego
2016

Cambridge University Press
2009

New York University Press
2009

Tokyo University of Science
2008

Kitasato Institute Hospital
2007

Mingxun Wang Jeremy Carver Vanessa V. Phelan Laura M. Sanchez Neha Garg and 95 more Yao Peng Don D. Nguyen Jeramie D. Watrous Clifford A. Kapono Tal Luzzatto‐Knaan Carla Porto Amina Bouslimani Alexey V. Melnik Michael J. Meehan Wei-Ting Liu Max Crüsemann Paul D. Boudreau Eduardo Esquenazi Mario Sandoval‐Calderón Roland D. Kersten Laura Pace Robert A. Quinn Katherine Duncan Cheng‐Chih Hsu Dimitrios J. Floros Ronnie G. Gavilán Karin Kleigrewe Trent R. Northen Rachel J. Dutton Delphine Parrot Erin E. Carlson Bertrand Aigle Charlotte Frydenlund Michelsen Lars Jelsbak Christian Sohlenkamp Pavel A. Pevzner Anna Edlund Jeffrey S. McLean Jörn Piel Brian T. Murphy Lena Gerwick Chih‐Chuang Liaw Yuliang Yang Hans‐Ulrich Humpf Maria Maansson Robert A. Keyzers Amy Sims Andrew R. Johnson Ashley M. Sidebottom Brian E. Sedio Andreas Klitgaard Charles B. Larson Cristopher A. Boya P. Daniel Torres‐Mendoza David J. Gonzalez Denise Brentan Silva Lucas Maciel Mauriz Marques Daniel P. Demarque Eglė Pociūtė Ellis C. O’Neill Enora Briand Eric J. N. Helfrich Eve A. Granatosky Evgenia Glukhov Florian Ryffel Hailey Houson Hosein Mohimani Jenan J. Kharbush Yi Zeng Julia A. Vorholt Kenji L. Kurita Pep Charusanti Kerry L. McPhail Kristian Fog Nielsen Lisa Vuong Maryam Elfeki Matthew F. Traxler Niclas Engene Nobuhiro Koyama Oliver B. Vining Ralph S. Baric Ricardo Silva Samantha J. Mascuch Sophie Tomasi Stefan Jenkins Venkat R. Macherla Thomas Hoffman Vinayak Agarwal Philip G. Williams Jingqui Dai Ram Neupane Joshua R. Gurr Andrés Mauricio Caraballo‐Rodríguez Anne Lamsa Chen Zhang Kathleen Dorrestein Brendan M. Duggan Jehad Almaliti Pierre‐Marie Allard Prasad Phapale

10.1038/nbt.3597 article EN Nature Biotechnology 2016-08-01
Mingxun Wang Jeremy Carver Vanessa V. Phelan Laura M. Sánchez Neha Garg and 95 more Peng Yao Don D. Nguyen Jeramie D. Watrous Clifford A. Kapono Tal Luzzatto‐Knaan Carla Da Porto Amina Bouslimani Alexey V. Melnik Michael J. Meehan Weiting Liu Max Crüsemann Paul D. Boudreau Eduardo Esquenazi Mario Sandoval‐Calderón Roland D. Kersten Laura Pace Robert A. Quinn Katherine Duncan Cheng‐Chih Hsu Dimitrios J. Floros Ronnie G. Gavilán Karin Kleigrewe Trent R. Northen Rachel J. Dutton Delphine Parrot Erin E. Carlson Bertrand Aigle Charlotte Frydenlund Michelsen Lars Jelsbak Christian Sohlenkamp Pavel A. Pevzner Anna Edlund Jeffrey S. McLean Jörn Piel Brian T. Murphy Lena Gerwick Chih‐Chuang Liaw Yuliang Yang Hans‐Ulrich Humpf Maria Maansson Robert A. Keyzers Amy Sims Andrew Johnson Ashley M. Sidebottom Brian E. Sedio Andreas Klitgaard Charles B. Larson Cristopher A.P. Boya Daniel Torres‐Mendoza David J. Gonzalez Denise Brentan Silva Lucas Miranda Marques Daniel P. Demarque Eglė Pociūtė Ellis C. O’Neill Enora Briand Eric J. N. Helfrich Eve A. Granatosky Evgenia Glukhov Florian Ryffel Hailey Houson Hosein Mohimani Jenan J. Kharbush Yi Zeng Julia A. Vorholt Kenji L. Kurita Pep Charusanti Kerry L. McPhail Kristian Fog Nielsen Lisa Vuong Maryam Elfeki Matthew F. Traxler Niclas Engene Nobuhiro Koyama Oliver B. Vining Ralph S. Baric Ricardo Silva Samantha J. Mascuch Sophie Tomasi Stefan Jenkins Venkat R. Macherla Thomas Hoffman Vinayak Agarwal Philip G. Williams Jingqui Dai Ram P. Neupane Joshua R. Gurr Andrés Mauricio Caraballo‐Rodríguez Anne Lamsa Chen Zhang Kathleen Dorrestein Brendan M. Duggan Jehad Almaliti Pierre‐Marie Allard Prasad Phapale

10.17615/dd92-mf79 article EN Carolina Digital Repository (University of North Carolina at Chapel Hill) 2016-01-01

ABSTRACT Potatoes are cultivated in southwest Greenland without the use of pesticides and with limited crop rotation. Despite fact that plant-pathogenic fungi present, no severe-disease outbreaks have yet been observed. In this report, we document a potato soil at Inneruulalik southern is suppressive against Rhizoctonia solani Ag3 uncover antifungal mechanism highly potent biocontrol bacterium, Pseudomonas fluorescens In5, isolated from soil. A combination molecular genetics, genomics,...

10.1128/mbio.00079-15 article EN cc-by-nc-sa mBio 2015-03-18

New fungal metabolites, designated quinadolines A (1) and B (2), were isolated from culture broth of Aspergillus sp. FKI-1746, their structures elucidated by NMR spectroscopy. The complete relative absolute stereochemistry 2 was determined X-ray crystallography amino acid analysis using a chiral column. Quinadolines moderately inhibited lipid droplet synthesis in mouse macrophages.

10.1021/ol802089p article EN Organic Letters 2008-10-16

Staphyloxanthin, a yellow pigment produced by methicillin-resistant Staphylococcus aureus (MRSA), is virulent factor escaping from the host immune system. A new screening method for inhibitors of staphyloxanthin production MRSA was established using paper disks. By this method, were selected natural product library (ca. 300) and actinomycete culture broths 1000). From library, four known lipid metabolism, cerulenin, dihydrobisvertinol, xanthohumol zaragozic acid, found to inhibit production;...

10.1248/bpb.35.48 article EN Biological and Pharmaceutical Bulletin 2012-01-01

complex (MAC) is a serious disease that mainly caused by infection with the non-tuberculous mycobacteria (NTM),

10.1128/aac.00917-23 article EN Antimicrobial Agents and Chemotherapy 2024-02-09

New rugulosins B (2) and C (3) were isolated together with known rugulosin (renamed A in this paper, 1) from whole culture of Penicillium radicum FKI-3765-2, their structures elucidated by NMR spectroscopy. Rugulosins a homodimer the same anthraquinone moieties, whereas was heterodimer analogous moieties. to showed antimicrobial activity against methicillin-resistant Staphylococcus aureus.

10.1021/ol100298h article EN Organic Letters 2010-03-11

The nonantibiotic small molecule cyslabdan, a labdan-type diterpene produced by Streptomyces sp. K04-0144, markedly potentiated the activity of β-lactam drug imipenem against methicillin-resistant Staphylococcus aureus (MRSA). To study mechanism action proteins that bind to cyslabdan were investigated in an MRSA lysate, which led identification FemA, is involved synthesis pentaglycine interpeptide bridge peptidoglycan MRSA. Furthermore, binding assay FemB and FemX with function similar FemA...

10.1371/journal.pone.0048981 article EN cc-by PLoS ONE 2012-11-06

Mycobacterium avium complex (MAC) is a serious disease mainly caused by M. and M.intracellulare. Although the incidence of MAC infection increasing worldwide, only few agents are clinically used, their therapeutic effects limited. Therefore, new anti-MAC needed. Approximately 6600 microbial samples were screened for anti-mycobacterial that inhibit growth both intracellulare, two culture broths derived from marine actinomycete strains OPMA1245 OPMA1730 had strong activity. Nosiheptide (1) was...

10.3390/molecules24081495 article EN cc-by Molecules 2019-04-16

Abstract Lariatin A, an 18-residue lasso peptide encoded by the five-gene cluster larABCDE , displays potent and selective anti-mycobacterial activity. The structural feature is N -terminal macrolactam ring, through which C passed to form rigid lariat-protoknot structure. In present study, we established a convergent expression system strategy in larA mutant gene-carrying plasmids were transformed into -deficient Rhodococcus jostii generated 36 lariatin variants of precursor protein LarA...

10.1038/srep30375 article EN cc-by Scientific Reports 2016-07-26

Among four mycobacteria, Mycobacterium avium, M. intracellulare, bovis BCG and Mycobacteroides (My.) abscessus, we established a silkworm infection assay with My. abscessus. When silkworms (fifth-instar larvae, n = 5) were infected through the hemolymph abscessus (7.5 × 107 CFU/larva) bred at 37 °C, they all died around 40 h after injection. Under conditions, clarithromycin amikacin, clinically used antimicrobial agents, exhibited therapeutic effects in dose-dependent manner. Furthermore,...

10.3390/molecules25214971 article EN cc-by Molecules 2020-10-27

[structure: see text] New isobisvertinol and known bisvertinol were isolated from the culture broth of Aspergillus sp. FKI-1746. Isobisvertinol with two alkenyl side chains extending in same direction inhibited lipid droplet accumulation macrophages, whereas those reverse had almost no effect on accumulation.

10.1021/ol062722m article EN Organic Letters 2007-01-10

A new fungal metabolite designated calpinactam (1) was isolated from the culture broth of Mortierella alpina FKI-4905, and its structure elucidated by spectroscopic analyses including NMR experiments. Calpinactam found to be a hexapeptide with caprolactam ring at C-terminal. Its absolute stereochemistry determined amino acid analysis total synthesis. selectively inhibited growth mycobacteria among various microorganisms. The MIC values against Mycobacterium smegmatis M. tuberculosis were...

10.1021/ol902553z article EN Organic Letters 2009-12-23
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