Tanner Koomar

ORCID: 0000-0003-0777-8678
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Research Areas
  • Genetics and Neurodevelopmental Disorders
  • Autism Spectrum Disorder Research
  • Genomics and Rare Diseases
  • Genomic variations and chromosomal abnormalities
  • Language Development and Disorders
  • Functional Brain Connectivity Studies
  • Genetic Associations and Epidemiology
  • Sexual Differentiation and Disorders
  • Bioinformatics and Genomic Networks
  • LGBTQ Health, Identity, and Policy
  • Machine Learning in Healthcare
  • Reading and Literacy Development
  • Attention Deficit Hyperactivity Disorder
  • Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
  • Language and cultural evolution
  • Global Educational Reforms and Inequalities
  • Child Nutrition and Feeding Issues
  • Virology and Viral Diseases
  • Child Nutrition and Water Access
  • Cell Image Analysis Techniques
  • Hearing Impairment and Communication
  • Hemispheric Asymmetry in Neuroscience
  • EEG and Brain-Computer Interfaces
  • RNA and protein synthesis mechanisms
  • Vaccine Coverage and Hesitancy

University of Iowa
2016-2024

Carver Bible College
2018

Catherine Doust Pierre Fontanillas Else Eising Scott D. Gordon Zhengjun Wang and 95 more Gökberk Alagöz Barbara Molz Stella Aslibekyan Adam Auton Elizabeth Babalola Robert K. Bell Jessica Bielenberg Katarzyna Bryc Emily Bullis Daniella Coker Gabriel Cuéllar-Partida Devika Dhamija Sayantan Das Sarah L. Elson Teresa Filshtein Kipper Fletez‐Brant Will Freyman Pooja Gandhi Karl Heilbron Barry Hicks David A. Hinds Ethan M. Jewett Yunxuan Jiang Katelyn Kukar Keng‐Han Lin Maya Lowe Jey C. McCreight Matthew H. McIntyre Steven J. Micheletti Meghan E. Moreno Joanna L. Mountain Priyanka Nandakumar Elizabeth S. Noblin Jared O’Connell Aaron A. Petrakovitz G. David Poznik Morgan Schumacher Anjali J. Shastri Janie F. Shelton Jingchunzi Shi Suyash Shringarpure Vinh Tran Joyce Y. Tung Xin Wang Wei Wang Catherine H. Weldon Peter Wilton Alejandro Hernandez Corinna Wong Christophe Toukam Tchakouté Filippo Abbondanza Andrea G. Allegrini Till F. M. Andlauer Cathy L. Barr Manon Bernard Kirsten Blokland Milene Bonte Dorret I. Boomsma Thomas Bourgeron Daniel Brandeis Manuel Carreiras Fabiola Ceroni Valéria Csépe Philip S. Dale Peter F. de Jong Jean‐François Démonet Eveline L. de Zeeuw Yu Feng Marie-Christine Franken Margot Gerritse Alessandro Gialluisi Sharon Guger Marianna E. Hayiou‐Thomas Juan Hernández Jouke‐Jan Hottenga Charles Hulme Philip R. Jansen Juha Kere Elizabeth N. Kerr Tanner Koomar Karin Landerl Gabriel Leonard Zhijie Liao Maureen W. Lovett Heikki Lyytinen Angela Martinelli Urs Maurer Jacob J. Michaelson Nazanin Mirza‐Schreiber Kristina Moll Angela Morgan Bertram Müller‐Myhsok Dianne F. Newbury Markus M. Nöthen Tomáš Paus

Abstract Reading and writing are crucial life skills but roughly one in ten children affected by dyslexia, which can persist into adulthood. Family studies of dyslexia suggest heritability up to 70%, yet few convincing genetic markers have been found. Here we performed a genome-wide association study 51,800 adults self-reporting diagnosis 1,087,070 controls identified 42 independent significant loci: 15 genes linked cognitive ability/educational attainment, 27 new potentially more specific...

10.1038/s41588-022-01192-y article EN cc-by Nature Genetics 2022-10-20
Else Eising Nazanin Mirza‐Schreiber Eveline L. de Zeeuw Carol A. Wang Dongnhu T. Truong and 90 more Andrea G. Allegrini Chin Yang Shapland Gu Zhu Karen G. Wigg Margot Gerritse Barbara Molz Gökberk Alagöz Alessandro Gialluisi Filippo Abbondanza Kaili Rimfeld Marjolein van Donkelaar Zhijie Liao Philip R. Jansen Till F. M. Andlauer Timothy C. Bates Manon Bernard Kirsten Blokland Milene Bonte Anders D. Børglum Thomas Bourgeron Daniel Brandeis Fabiola Ceroni Valéria Csépe Philip S. Dale Peter F. de Jong John C. DeFries Jean‐François Démonet Ditte Demontis Yu Feng Scott D. Gordon Sharon Guger Marianna E. Hayiou‐Thomas Juan Hernández Jouke‐Jan Hottenga Charles Hulme Juha Kere Elizabeth N. Kerr Tanner Koomar Karin Landerl Gabriel Leonard Maureen W. Lovett Heikki Lyytinen Nicholas G. Martin Angela Martinelli Urs Maurer Jacob J. Michaelson Kristina Moll Anthony P. Monaco Angela Morgan Markus M. Nöthen Zdenka Pausová Craig E. Pennell Bruce F. Pennington Kaitlyn M. Price Veera M. Rajagopal Franck Ramus Louis Richer Nuala H. Simpson Shelley D. Smith Maggie Snowling John Stein Lisa J. Strug Joel B. Talcott Henning Tiemeier Marc P. van der Schroeff Ellen Verhoef Kate E. Watkins Margaret Wilkinson Margaret J. Wright Cathy L. Barr Dorret I. Boomsma Manuel Carreiras Marie-Christine Franken Jeffrey R. Gruen Michelle Luciano Bertram Müller‐Myhsok Dianne F. Newbury Richard K. Olson Silvia Paracchini Tomáš Paus Robert Plomin Sheena Reilly Gerd Schulte‐Körne J. Bruce Tomblin Elsje van Bergen Andrew J. O. Whitehouse Erik G. Willcutt Beaté St Pourcain Clyde Francks Simon E. Fisher

The use of spoken and written language is a fundamental human capacity. Individual differences in reading- language-related skills are influenced by genetic variation, with twin-based heritability estimates 30 to 80% depending on the trait. architecture complex, heterogeneous, multifactorial, but investigations contributions single-nucleotide polymorphisms (SNPs) were thus far underpowered. We present multicohort genome-wide association study (GWAS) five traits assessed individually using...

10.1073/pnas.2202764119 article EN cc-by Proceedings of the National Academy of Sciences 2022-08-23

This study is the first genetically-informed investigation of avoidant/restrictive food intake disorder (ARFID), an eating that profoundly impacts quality life for those affected. ARFID highly comorbid with autism, and we provide estimate its prevalence in a large phenotypically diverse autism cohort (a subsample SPARK study, N = 5,157 probands). estimate, 21% (at balanced accuracy 80%), at upper end previous estimates from studies based on clinical samples, suggesting under-diagnosis...

10.3389/fpsyt.2021.668297 article EN cc-by Frontiers in Psychiatry 2021-06-09
Tianyun Wang Chang N. Kim Trygve E. Bakken Madelyn A. Gillentine Barbara Henning and 95 more Yafei Mao Christian Gilissen Tomasz J. Nowakowski Evan E. Eichler John Acampado J. Andrea Alpha Amatya Irina Astrovskaya Asif Bashar Elizabeth Brooks Martin E. Butler Lindsey A. Cartner Wubin Chin Wendy K. Chung Amy M. Daniels Pamela Feliciano Chris Fleisch Swami Ganesan William B. Jensen Alex E. Lash Richard P. Marini Vincent J. Myers Eirene O'Connor Chris Rigby B. E. Robertson Neelay Shah Swapnil Shah Emily Singer LeeAnne Green Snyder Alexandra N. Stephens Jennifer Tjernagel Brianna M. Vernoia Natalia Volfovsky L. Casey White Alexander Hsieh Yufeng Shen Xueya Zhou Tychele N. Turner Ethan Bahl Taylor R. Thomas Leo Brueggeman Tanner Koomar Jacob J. Michaelson Brian J. O’Roak Rebecca Barnard Richard A. Gibbs Donna M. Muzny Aniko Sabo Kelli L. Baalman Ahmed Evan E. Eichler Matthew Siegel Leonard Abbeduto David G. Amaral Brittani A. Hilscher Deana Li Kaitlin N. Smith Samantha Thompson Charles F. Albright Eric Butter Sara Eldred Nathan Hanna Mark Jones Daniel L. Coury Jessica Scherr Taylor Pifher Erin Roby Brandy Dennis Lorrin Higgins Melissa A. Brown Michael Alessandri Anibal Gutierrez Melissa N. Hale Lynette M. Herbert Hoa Lam Schneider Giancarla David Robert D. Annett Dustin E. Sarver Ivette Arriaga Alexies Camba Amanda C. Gulsrud Monica Haley James T. McCracken Sophia Sandhu Maira Tafolla Wha S. Yang Laura A. Carpenter Catherine Bradley Frampton Gwynette Patricia Manning Rebecca C. Shaffer Carrie Thomas Raphael Bernier Emily A. Fox Jennifer Gerdts Micah Pepper

Most genetic studies consider autism spectrum disorder (ASD) and developmental (DD) separately despite overwhelming comorbidity shared etiology. Here, we analyzed de novo variants (DNVs) from 15,560 ASD (6,557 SPARK) 31,052 DD trios independently also combined as broader neurodevelopmental disorders (NDDs) using three models. We identify 615 NDD candidate genes (false discovery rate [FDR] < 0.05) supported by ≥1 models, including 138 reaching Bonferroni exome-wide significance (P 3.64e-7) in...

10.1073/pnas.2203491119 article EN cc-by Proceedings of the National Academy of Sciences 2022-11-09

1 Summary Minor genetic changes have produced profound differences in cognitive abilities between humans and our closest relatives, particularly language. Despite decades of research, ranging from single-gene studies to broader evolutionary analyses[1, 2, 3, 4, 5], key questions about the genomic foundations human language persisted, including which sequences are involved, how they evolved, whether similar occur other vocal learning species. Here we provide first evidence directly linking...

10.1101/2025.03.07.641231 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2025-03-11

Spatiotemporal transcriptomic profiling has provided valuable insight into the patterning of gene expression throughout human brain from early fetal development to adulthood. When combined with prior knowledge a disease's age at onset and region-specificity, these profiles have necessary context both strengthen putative gene-disease associations infer new associations. While wealth spatiotemporal data exists, there are currently no tools available visualize this within anatomical brain, thus...

10.1093/bioinformatics/btw726 article EN cc-by Bioinformatics 2016-11-16

Abstract Genetics has been one of the most powerful windows into biology autism spectrum disorder (ASD). It is estimated that a thousand or more genes may confer risk for ASD when functionally perturbed, however, only around 100 currently have sufficient evidence to be considered true “autism genes”. Massive genetic studies are underway producing data implicate additional genes. This approach — although necessary costly and slow-moving, making identification putative with existing vital....

10.1038/s41598-020-61288-5 article EN cc-by Scientific Reports 2020-03-12

The complexity of autism's phenotypic spectra is well-known, yet most genetic research uses case-control status as the target trait. It undetermined if autistic symptom domain severity underlying this heterogeneity heritable and pleiotropic with other psychiatric behavior traits in same manner autism status. In N = 6064 children SPARK cohort, we investigated common properties twelve subscales from three clinical instruments measuring traits: Social Communication Questionnaire (SCQ),...

10.1038/s41398-022-01982-2 article EN cc-by Translational Psychiatry 2022-06-13
Else Eising Nazanin Mirza‐Schreiber Eveline L. de Zeeuw Carol A. Wang Dongnhu T. Truong and 85 more Andrea G. Allegrini Chin Yang Shapland Gu Zhu Karen G. Wigg Margot Gerritse Barbara Molz Gökberk Alagöz Alessandro Gialluisi Filippo Abbondanza Kaili Rimfeld Marjolein van Donkelaar Zhijie Liao Philip R. Jansen Till F. M. Andlauer Timothy C. Bates Manon Bernard Kirsten Blokland Anders D. Børglum Thomas Bourgeron Daniel Brandeis Fabiola Ceroni Philip S. Dale Karin Landerl Heikki Lyytinen Peter F. de Jong John C. DeFries Ditte Demontis Yu Feng Scott D. Gordon Sharon Guger Marianna E. Hayiou‐Thomas Juan A. Hernández-Cabrera Jouke‐Jan Hottenga Charles Hulme Elizabeth N. Kerr Tanner Koomar Maureen W. Lovett Nicholas G. Martin Angela Martinelli Urs Maurer Jacob J. Michaelson Kristina Moll Anthony P. Monaco Angela Morgan Markus M. Nöthen Zdenka Pausová Craig E. Pennell Bruce F. Pennington Kaitlyn M. Price Veera M. Rajagopal Frank Ramus Louis Richer Nuala H. Simpson Shelley D. Smith Maggie Snowling John Stein Lisa J. Strug Joel B. Talcott Henning Tiemeier Marc M.P. van de Schroeff Ellen Verhoef Kate E. Watkins Margaret Wilkinson Margaret J. Wright Cathy L. Barr Dorret I. Boomsma Manuel Carreiras Marie-Christine Franken Jeffrey R. Gruen Michelle Luciano Bertram Müller‐Myhsok Dianne F. Newbury Richard K. Olson Silvia Paracchini Tomáš Paus Robert Plomin Gerd Schulte‐Körne Sheena Reilly J. Bruce Tomblin Elsje van Bergen Andrew J. O. Whitehouse Erik G. Willcutt Beaté St Pourcain Clyde Francks Simon E. Fisher

Abstract The use of spoken and written language is a capacity that unique to humans. Individual differences in reading- language-related skills are influenced by genetic variation, with twin-based heritability estimates 30-80%, depending on the trait. relevant architecture complex, heterogeneous, multifactorial, yet be investigated well-powered studies. Here, we present multicohort genome-wide association study (GWAS) five traits assessed individually using psychometric measures: word...

10.1101/2021.11.04.466897 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2021-11-04

Over the past decade, a focus on de novo mutations has rapidly accelerated gene discovery in autism spectrum disorder (ASD), intellectual disability (ID), and other neurodevelopmental disorders (NDDs). However, recent studies suggest that only minority of cases are attributable to mutations, instead these often result from an accumulation various forms genetic risk. Consequently, we adopted inclusive approach investigate risk contributing case male monozygotic twins with ASD ID. At time...

10.1101/mcs.a003285 article EN Molecular Case Studies 2018-12-01

Abstract Background Genes are one of the most powerful windows into biology autism, and it has been estimated that perhaps a thousand or more genes may confer risk. However, less than 100 currently viewed as having robust enough evidence to be considered true "autism genes". Massive genetic studies underway produce data implicate additional genes, but this approach, although necessary, is costly slow-moving. Methods We approach autism gene discovery machine learning problem, rather...

10.1101/370601 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2018-07-16

Language and the ability to communicate effectively are key factors in mental health well-being. Despite this critical importance, research on language is limited by lack of a scalable phenotyping toolkit.

10.1101/2024.03.29.24305034 preprint EN cc-by-nc-nd medRxiv (Cold Spring Harbor Laboratory) 2024-03-29

Abstract The complexity of autism’s phenotypic spectra is well-known, yet most genetic research uses case-control status as the target trait. It undetermined if autistic symptom domain severity underlying this heterogeneity heritable and pleiotropic with other psychiatric behavior traits in same manner autism status. In N = 6,064 children SPARK cohort, we investigated common properties twelve subscales from three clinical instruments measuring traits: Social Communication Questionnaire...

10.1101/2021.08.30.21262845 preprint EN medRxiv (Cold Spring Harbor Laboratory) 2021-09-01

Neuroimaging research has begun adopting deep learning to model structural differences in the brain. This is a break from previous approaches that rely largely on anatomical volumetric or thickness-based features. Currently, most studies employ either convolutional based models traditional machine use Because of this split, it unclear which approach yields better predictive performance, whether two will lead different neuroanatomical conclusions, potentially even when applied same dataset....

10.1109/isbi45749.2020.9098402 article EN 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI) 2020-04-01
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