A5100361368- Plant Molecular Biology Research
- Plant Reproductive Biology
- Photosynthetic Processes and Mechanisms
- Plant Gene Expression Analysis
- Plant Stress Responses and Tolerance
- Plant nutrient uptake and metabolism
- Polysaccharides and Plant Cell Walls
- Light effects on plants
- Plant Physiology and Cultivation Studies
- Ginseng Biological Effects and Applications
- Genetic and Environmental Crop Studies
- African Botany and Ecology Studies
- Tree Root and Stability Studies
- Aluminum toxicity and tolerance in plants and animals
- Plant Micronutrient Interactions and Effects
- Plant Pathogens and Resistance
- Cryptography and Data Security
- Plant-Microbe Interactions and Immunity
- Genetic Mapping and Diversity in Plants and Animals
- Cryptographic Implementations and Security
- Leaf Properties and Growth Measurement
- Plant Disease Resistance and Genetics
- Cryptography and Residue Arithmetic
- FOXO transcription factor regulation
- Allelopathy and phytotoxic interactions
Cornell University
2009-2024
Agricultural Research Service
2024
Marine Biology Institute of Shandong Province
2024
Nanjing Agricultural University
2024
Ministry of Agriculture and Rural Affairs
2024
Chengdu University
2024
Northwest A&F University
2022-2024
Shanxi Agricultural University
2023
Jilin Agricultural University
2020-2023
Chinese Academy of Tropical Agricultural Sciences
2018-2022
Plant steroid hormones, brassinosteroids (BRs), are of great importance for plant growth and development. BRs signal through a cell surface receptor kinase, BRI1, GSK3-like BIN2, to regulate the BES1/BZR1 family transcription factors, which directly bind target gene promoters activate or repress expression mediate BR responses. To understand how BES1 regulates expression, we identified two BES1-interacting proteins, ELF6 (early flowering 6) its homolog REF6 (relative early 6), both Jumonji...
Abstract Cucumber is a model cucurbitaceous plant with known genome sequence which important for studying molecular mechanisms of root development. In this study, RNA sequencing was employed to explore the mechanism melatonin‐induced lateral formation in cucumber under salt stress. Three groups seeds were examined, that is, primed without melatonin ( CK ), solution containing 10 or 500 μmol/L (M10 and M500, respectively). These then germinated NaCl solution. The ‐seq analysis generated...
Abstract Abscisic acid (ABA) is a critical plant hormone for fruit ripening and adaptive stress responses in strawberry. Previous high-throughput sequencing results indicated that ABA-insensitive (ABI)5, an important transcription factor the ABA signaling pathway, was target novel microRNA (miRNA), Fan-miR73. In present study, exogenous treatment found to accelerate through differentially regulating transcripts of metabolism signal transduction related genes, including NCED1 , PYR1 ABI1...
Plants possess unique primary cell walls made of complex polysaccharides that play critical roles in determining intrinsic and organ size. How genes responsible for synthesizing modifying the wall are regulated by microRNAs (miRNAs) to control plant size remains largely unexplored. Here we identified 23 putative wall-related miRNAs, termed as CW-miRNAs, Arabidopsis thaliana characterized miR775 an example. We showed post-transcriptionally silences GALT9, which encodes endomembrane-located...
The gibberellin (GA) 20-oxidase encoded by the GA5 gene of Arabidopsis directs GA biosynthesis to active GAs, whereas that P16 pumpkin endosperm leads inactive GAs. Negative feedback regulation expression was demonstrated in stems bioactive GAs but not GA. In transgenic plants overexpressing P16, there a severe reduction amounts C20–GA intermediates, accumulation large GA25 and GA17, GA4 content, small increase GA1. However, due regulation, GA4, coding for subsequent 3β-hydroxylase, greatly...
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Mango ( Mangifera indica L.) is famous for its sweet flavor and aroma. China one of the major mango-producing countries. known variations in flowering intensity that impacts fruit yield farmers' profitability. In present study, transcriptome metabolome analyses three cultivars with different intensities were performed to preliminarily elucidate their regulatory mechanisms. The profiling identified 36,242 genes. observation was differential expression patterns 334 flowering-related genes...
Abstract The genus Delphinium (Ranunculaceae) with its unique and highly complex floral structure is an ideal system to address some key questions in terms of morphological evolutionary studies flowers. In D. anthriscifolium, for example, the original eight petal primordia differentiate into three types at maturity (i.e., two dorsal spurred, lateral flat, four ventral reduced petals). mechanisms underlying their identity determination differentiation remain unclear. Here, through a...
Abstract Good root growth in the early post-germination stages is an important trait for direct seeding rice, but its genetic control poorly understood. In this study, we examined architecture of variation primary length using a diverse panel 178 accessions. Four QTLs (qRL3, qRL6, qRL7, and qRL11) were identified genome-wide association studies. One candidate gene was validated major QTL qRL11, namely glucosyltransferase OsIAGLU. Disruption Osiaglu mutants reduced numbers lateral crown...
GRAS transcription factors are a kind of plant-specific factor that have been found in variety plants. According to previous studies, proteins widely involved the physiological processes plant signal transduction, stress, growth and development. The Jilin ginseng (Panax C.A. Meyer) is heterogeneous tetraploid perennial herb Araliaceae family, genus. Important information regarding has not reported ginseng. In this study, 59 Panax (PgGRAS) genes were obtained from transcriptome data divided...
MicroRNAs (miRNAs) are trans-acting small regulatory RNAs that work coordinately with transcription factors (TFs) to shape the repertoire of cellular mRNAs available for translation. Despite our growing knowledge individual plant miRNAs, their global roles in gene networks remain mostly unassessed. Based on interactions obtained from public databases and curated literature, we reconstructed an integrated miRNA network Arabidopsis includes 66 core TFs, 318 1712 downstream genes. We found...
Abstract Background Ginseng is an important medicinal herb in Asia and Northern America. The basic leucine zipper ( bZIP ) transcription factor genes play roles many biological processes plant responses to abiotic biotic stresses, such as drought stress. Nevertheless, the remain unknown ginseng. Results Here, we report 91 identified from ginseng, designated PgbZIP genes. These were alternatively spliced into 273 transcripts. Phylogenetic analysis grouped ten groups, including A, B, C, D, E,...
SQUAMOSA promoter binding protein (SBP) is a kind of plant-specific transcription factor, which plays crucial role in stress responses and plant growth development by activating inhibiting the multiple target genes. In this study, total 30 SBP genes were identified from Populus trichocarpa genome randomly distributed on 16 chromosomes poplar. According to phylogenetic analysis, PtSBPs can be divided into six categories, 14 out belong VI. Furthermore, VI proved have targeting relationship...
Abstract Background Ginseng, Panax ginseng Meyer, is a traditional herb that immensely valuable both for human health and medicine medicinal plant research. The homeodomain leucine zipper ( HD-Zip ) gene family plant-specific transcription factor indispensable in the regulation of growth development response to environmental stresses. Results We identified 117 transcripts from transcriptome cv. Damaya widely grown Jilin, China where approximately 60% world’s produced. These were positioned...
Germination and early seedling development are coordinately regulated by glucose phytohormones such as ABA, GA, ethylene. However, the molecules that affect plant responses to remain be fully elucidated. Eukaryotic release factor 1 (eRF1) is responsible for recognition of stop codons in mRNAs during protein synthesis. Accumulating evidence indicates eRF1 functions other processes addition translation termination. The physiological role eRF1-2, a member family, Arabidopsis was examined here....
Mesocotyl elongation in rice is essential for seedling emergence. Our previous screening identified two weedy accessions (Oryza sativa f. spontanea L.) (WR04-6 and WR04-43) were with unusually long mesocotyl. In this study, using cultivar (Nipponbare, Oryza L., subspecies temperate japonica) as a control, we found that at the middle end of mesocotyl elongation, predominant cortical microtubules (CMTs) are transversely oriented related to cell while, cultivated had oblique MT arrays....
Arabidopsis heterotrimeric G proteins regulate diverse plant growth and defense processes by coupling to 7TM AtRGS1 proteins. Although protein mutants display alterations in response multiple hormones, the underlying mechanism which participate regulation of hormone responses remains elusive. Here, we show that genetic disruption Gα Gβ subunits results reduced sensitivity JA treatment. Furthermore, using confocal microscopy, VA-TIRFM, FRET-FLIM, provide evidence stimulation induces...
Soil salinization and alkalization are among the major agricultural threats that affect crop productivity worldwide, which increasing day by with an alarming rate. In recent years, several halophytes have been investigated for their utilization in soil remediation to decipher mechanism of salt-tolerance these high salt tolerant genetic repositories. Suaeda salsa is annual halophytic herb family Amaranthaceae, displaying alkali-resistance having nutritive value. However, fundamental...
:SPL (SQUAMOSA promoter binding protein-like) gene family is specific transcription factor in the plant that have an important function for growth and development. Although SPL has been widely studied reported many various species from gymnosperm to angiosperm, there are no systematic studies reports about Panax ginseng C. A. Meyer. In this study, we conducted transcriptome-wide identification, evolutionary analysis, structure expression characteristics analysis of by bioinformatics. We...
Background PEBP (phosphatidyl ethanolamine-binding protein) is widely found in eukaryotes including plants, animals and microorganisms. In the family plays vital roles regulating flowering time morphogenesis highly associated to agronomic traits yields of crops, which has been identified characterized many plant species but not well studied Tartary buckwheat ( Fagopyrum tataricum Gaertn.), an important coarse food grain with medicinal value. Methods Genome-wide analysis FtPEBP gene members...
Slow relaxation and induction of Non-Photochemical Quenching (NPQ) limits plant productivity under fluctuating light in C3 plants but it is unknown if this trait extends to C4 plants. Three genes have been implicated determining NPQ rates intermittent leaf shading; VDE ZEP interconvert the xanthophyll pigments violaxanthin zeaxanthin, PsbS regulates overall level NPQ. Here we report overexpression Arabidopsis thaliana VDE, ZEP, NADP-Malic Enzyme monocot Setaria viridis. We demonstrate these...
In cereal plants, the size of panicle (inflorescence) is a critical factor for yield. Panicle determined by complex interplay genetic and environmental factors, but mechanisms underlying adaptations to temperature stress during development remain largely unknown. We identify rice THERMOSENSITIVE BARREN PANICLE (TAP) gene, which encodes transposase-derived FAR1-RELATED SEQUENCE (FRS) protein responsible regulating spikelet at high ambient temperature. The tap mutants display...
The CLAVATA3/EMBRYO-SURROUNDING REGION (CLE) genes encode signaling peptides that play important roles in various developmental and physiological processes. However, the systematic identification characterization of CLE foxtail millet (Setaria italica L.) remain limited. In this study, we identified characterized 41 SiCLE genome. These were distributed across nine chromosomes classified into four groups, with five pairs resulting from gene duplication events. within same phylogenetic group...