Seyedeh M. Zekavat

ORCID: 0000-0003-4026-8944
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About
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Research Areas
  • Genetic Associations and Epidemiology
  • Acute Myeloid Leukemia Research
  • Myeloproliferative Neoplasms: Diagnosis and Treatment
  • Genomics and Rare Diseases
  • Lipoproteins and Cardiovascular Health
  • Cancer Genomics and Diagnostics
  • Retinal Diseases and Treatments
  • Retinal Imaging and Analysis
  • Epigenetics and DNA Methylation
  • Cardiovascular Health and Risk Factors
  • RNA modifications and cancer
  • Cardiovascular Disease and Adiposity
  • Atherosclerosis and Cardiovascular Diseases
  • Glaucoma and retinal disorders
  • Cancer, Lipids, and Metabolism
  • Genomic variations and chromosomal abnormalities
  • Hemoglobinopathies and Related Disorders
  • Bioinformatics and Genomic Networks
  • Gene expression and cancer classification
  • Diabetes and associated disorders
  • COVID-19 Clinical Research Studies
  • Diabetes, Cardiovascular Risks, and Lipoproteins
  • Nutrition, Genetics, and Disease
  • Single-cell and spatial transcriptomics
  • Immune Cell Function and Interaction

Broad Institute
2016-2025

Harvard University
2016-2025

Massachusetts Eye and Ear Infirmary
2022-2025

Yale University
2017-2024

Massachusetts General Hospital
2016-2024

Massachusetts Institute of Technology
2015-2023

VA Boston Healthcare System
2022

Twitter (United States)
2021

Center for Genomic Science
2019

Center for Human Genetics
2016

Alexander G. Bick Joshua S. Weinstock Satish K. Nandakumar Charles P. Fulco Erik L. Bao and 95 more Seyedeh M. Zekavat Mindy D Szeto Xiaotian Liao Matthew Leventhal Joseph Nasser Kyle Chang Cecelia Laurie Bala Bharathi Burugula Christopher J. Gibson Abhishek Niroula Amy Lin Margaret A. Taub François Aguet Kristin Ardlie Braxton D. Mitchell Kathleen C. Barnes Arden Moscati Myriam Fornage Susan Redline Bruce M. Psaty Edwin K. Silverman Scott T. Weiss Nicholette D. Palmer Ramachandran S. Vasan Esteban G. Burchard Sharon L. R. Kardia Jiang He Robert C. Kaplan Nicholas L. Smith Donna K. Arnett David A. Schwartz Adolfo Correa Mariza de Andrade Xiuqing Guo Barbara A. Konkle Brian Custer Juan M. Peralta Hongsheng Gui Deborah A. Meyers Stephen T. McGarvey Ida Yii-Der Chen M. Benjamin Shoemaker Patricia A. Peyser Jai Broome Stephanie M. Gogarten Fei Fei Wang Quenna Wong May E. Montasser Michelle Daya Eimear E. Kenny Kari E. North Lenore J. Launer Brian E. Cade Joshua C. Bis Michael H. Cho Jessica Lasky‐Su Donald W. Bowden L. Adrienne Cupples Angel C. Y. Mak Lewis C. Becker Jennifer A. Smith Tanika N. Kelly Stella Aslibekyan Susan R. Heckbert Hemant K. Tiwari Ivana V. Yang John A. Heit Steven A. Lubitz Jill M. Johnsen Joanne E. Curran Sally E. Wenzel Daniel E. Weeks D. C. Rao Dawood Darbar Jee‐Young Moon Russell P. Tracy Erin Buth Nicholas Rafaels Ruth J. F. Loos Peter Durda Yongmei Liu Lifang Hou Jiwon Lee Priyadarshini Kachroo Barry I. Freedman Daniel Levy Lawrence F. Bielak James E. Hixson James S. Floyd Eric A. Whitsel Patrick T. Ellinor Marguerite R. Irvin Tasha E. Fingerlin Laura M. Raffield Sebastian M. Armasu

10.1038/s41586-020-2819-2 article EN Nature 2020-10-14

<h3>Importance</h3> In observational studies, abdominal adiposity has been associated with type 2 diabetes and coronary heart disease (CHD). Whether these associations represent causal relationships remains uncertain. <h3>Objective</h3> To test the association of a polygenic risk score for waist-to-hip ratio (WHR) adjusted body mass index (BMI), measure adiposity, CHD through potential intermediates blood lipids, pressure, glycemic phenotypes. <h3>Design, Setting, Participants</h3> A WHR...

10.1001/jama.2016.21042 article EN JAMA 2017-02-14

Recent guidelines endorse using history of menopause before age 40 years to refine atherosclerotic cardiovascular disease risk assessments among middle-aged women. Robust data on in this population are lacking.To examine the development diseases and factors women with natural surgical years.Cohort study (UK Biobank), adult residents United Kingdom recruited between 2006 2010. Of who were 69 old postmenopausal at enrollment, 144 260 eligible for inclusion. Follow-up occurred through August...

10.1001/jama.2019.19191 article EN JAMA 2019-11-18

Background: The relative prevalence and clinical importance of monogenic mutations related to familial hypercholesterolemia high polygenic score (cumulative impact many common variants) pathways for early-onset myocardial infarction remain uncertain. Whole-genome sequencing enables simultaneous ascertainment both each individual. Methods: We performed deep-coverage whole-genome 2081 patients from 4 racial subgroups hospitalized in the United States with (age ≤55 years) recruited a 2:1...

10.1161/circulationaha.118.035658 article EN Circulation 2019-01-17
Pradeep Natarajan Gina M. Peloso Seyedeh M. Zekavat May E. Montasser Andrea Ganna and 95 more Mark Chaffin Amit V. Khera Wei Zhou Jonathan M. Bloom J Engreitz Jason Ernst Jeffrey R. O’Connell Sanni Ruotsalainen Maris Alver Ani Manichaikul W. Craig Johnson James A. Perry Timothy Poterba Cotton Seed Ida Surakka Tõnu Esko Samuli Ripatti Veikko Salomaa Adolfo Correa Ramachandran S. Vasan Manolis Kellis Benjamin M. Neale Eric S. Lander Gonçalo R. Abecasis Braxton D. Mitchell Stephen S. Rich James G. Wilson L. Adrienne Cupples Jerome I. Rotter Cristen J. Willer Sekar Kathiresan Namiko Abe Christine M. Albert Nicholette Palmer Allred Laura Almasy Álvaro Alonso Seth A. Ament Peter Anderson Pramod Anugu Deborah Applebaum‐Bowden Dan E. Arking Donna K. Arnett Allison E. Ashley‐Koch Stella Aslibekyan Tim Assimes Paul L. Auer Dimitrios Avramopoulos J. A. Barnard Kathleen C. Barnes R. Graham Barr Emily Barron‐Casella Terri H. Beaty Diane M. Becker Lewis C. Becker Rebecca Beer Ferdouse Begum Amber L. Beitelshees Emelia J. Benjamin Marcos Bezerra Larry Bielak Joshua C. Bis Thomas W. Blackwell John Blangero Eric Boerwinkle Ingrid B. Borecki Russell P. Bowler Jennifer A. Brody Ulrich Broeckel Jai Broome Karen Bunting Esteban Burchard Jonathan Cardwell Cara L. Carty Richard Casaburi James F. Casella Christy Chang Daniel I. Chasman Sameer Chavan Bo-Juen Chen Wei‐Min Chen Yii-Der Ida Chen Michael H. Cho Seung Hoan Choi Lee‐Ming Chuang Mina K. Chung Elaine Cornell Carolyn Crandall James D. Crapo Joanne E. Curran Jeffrey L. Curtis Brian Custer Coleen Damcott Dawood Darbar Sayantan Das Sean P. David

Large-scale deep-coverage whole-genome sequencing (WGS) is now feasible and offers potential advantages for locus discovery. We perform WGS in 16,324 participants from four ancestries at mean depth >29X analyze genotypes with quantitative traits-plasma total cholesterol, low-density lipoprotein cholesterol (LDL-C), high-density triglycerides. Common variant association yields known loci except few variants previously poorly imputed. Rare coding Mendelian dyslipidemia genes but rare...

10.1038/s41467-018-05747-8 article EN cc-by Nature Communications 2018-08-17
Seyedeh M. Zekavat Shu‐Hong Lin Alexander G. Bick Aoxing Liu Kaavya Paruchuri and 95 more Chen Wang Md Mesbah Uddin Yixuan Ye Zhaolong Yu Xiaoxi Liu Yoichiro Kamatani Romit Bhattacharya James P. Pirruccello Akhil Pampana Po−Ru Loh Puja Kohli Steven A. McCarroll Krzysztof Kiryluk Benjamin M. Neale Iuliana Ionita‐Laza Eric A. Engels Derek W. Brown Jordan W. Smoller Robert C. Green Elizabeth W. Karlson Matthew S. Lebo Patrick T. Ellinor Scott T. Weiss Mark J. Daly Satoshi Koyama Kaoru Ito Yukihide Momozawa Koichi Matsuda Yuji Yamanashi Yoichi Furukawa Takayuki Morisaki Yoshinori Murakami Kaori Muto Akiko Nagai Wataru Obara Ken Yamaji Kazuhisa Takahashi Satoshi Asai Yasuo Takahashi Takao Suzuki Nobuaki Sinozaki Hiroki Yamaguchi Shiro Minami Shigeo Murayama Kozo Yoshimori Satoshi Nagayama Daisuke Obata Masahiko Higashiyama Akihide Masumoto Yukihiro Koretsune Aarno Palotie Adam Ziemann Adele A. Mitchell Adriana Huertas‐Vázquez Aino Salminen Airi Jussila Aki S. Havulinna Alex Mackay Ali Abbasi Amanda Elliott Amy L. Cole Anastasia Shcherban Anders Mälarstig Andrea Ganna Andrey Loboda Anna Podgornaia Anne Lehtonen Anne Pitkäranta Anne M. Remes Annika Auranen Antti Hakanen Antti Palomäki Anu Jalanko Anu Loukola Aparna Chhibber Apinya Lertratanakul Arto Lehistö Graham J. Mann Åsa K. Hedman Audrey Y. Chu Aviv Madar Awaisa Ghazal Benjamin Challis Benjamin B. Sun Beryl B. Cummings Bridget Riley‐Gillis Caroline S. Fox Chia‐Yen Chen Clarence Wang Clément Chatelain Daniel Gordin Danjuma Quarless Danny Oh David F. Choy David A. Close

10.1038/s41591-021-01371-0 article EN Nature Medicine 2021-06-01

Background and Purpose: Clonal hematopoiesis of indeterminate potential (CHIP) is a novel age-related risk factor for cardiovascular disease–related morbidity mortality. The association CHIP with incident ischemic stroke was reported previously in an exploratory analysis including small number cases without replication lack subphenotyping. purpose this study to discover whether or hemorrhagic stroke. Methods: We utilized plasma genome sequence data blood DNA identify 78 752 individuals from...

10.1161/strokeaha.121.037388 article EN Stroke 2021-11-08
Waihay J. Wong Connor A. Emdin Alexander G. Bick Seyedeh M. Zekavat Abhishek Niroula and 95 more James P. Pirruccello Laura E. Dichtel Gabriel K. Griffin Md Mesbah Uddin Christopher J. Gibson Veronica Kovalcik Amy Lin Marie McConkey Amélie Vromman Rob S. Sellar Peter G. Kim Mridul Agrawal Joshua S. Weinstock Michelle T. Long Bing Yu Rajarshi Banerjee Rowan C. Nicholls Andrea Dennis Matt Kelly Po−Ru Loh Steve McCarroll Eric Boerwinkle Ramachandran S. Vasan Siddhartha Jaiswal Andrew D. Johnson Raymond T. Chung Kathleen E. Corey Daniel Levy Christie M. Ballantyne Namiko Abe Gonçalo R. Abecasis François Aguet Christine M. Albert Laura Almasy Álvaro Alonso Seth A. Ament Peter Anderson Pramod Anugu Deborah Applebaum‐Bowden Kristin Ardlie Dan E. Arking Donna K. Arnett Allison E. Ashley‐Koch Stella Aslibekyan Tim Assimes Paul L. Auer Dimitrios Avramopoulos Najib Ayas Adithya Balasubramanian John Barnard Kathleen C. Barnes R. Graham Barr Emily Barron‐Casella Lucas Barwick Terri H. Beaty Gerald J. Beck Diane M. Becker Lewis C. Becker Rebecca Beer Amber L. Beitelshees Emelia J. Benjamin Takis Benos Marcos Bezerra Larry Bielak Joshua C. Bis Thomas W. Blackwell John Blangero Nathan R. Blue Donald W. Bowden Russell P. Bowler Jennifer A. Brody Ulrich Broeckel Jai Broome Deborah Brown Karen Bunting Esteban G. Burchard Carlos D. Bustamante Erin Buth Brian E. Cade Jonathan Cardwell Vincent J. Carey Julie Carrier April P. Carson Cara L. Carty Richard Casaburi Juan P. Romero James F. Casella Peter J. Castaldi Mark Chaffin Christy Chang Yi–Cheng Chang Daniel I. Chasman Sameer Chavan Bo-Juen Chen Wei‐Min Chen

10.1038/s41586-023-05857-4 article EN Nature 2023-04-12

The microvasculature, the smallest blood vessels in body, has key roles maintenance of organ health and tumorigenesis. retinal fundus is a window for human vivo noninvasive assessment microvasculature. Large-scale complementary machine learning-based vasculature with phenome-wide genome-wide analyses may yield new insights into disease.

10.1161/circulationaha.121.057709 article EN cc-by Circulation 2021-11-08
Nicole M. Ferraro Benjamin J. Strober Jonah Einson Nathan S. Abell François Aguet and 95 more Alvaro Barbeira Margot Brandt Maja Bućan Stephane E. Castel Joe R. Davis Emily Greenwald Gaelen T. Hess Austin T. Hilliard Rachel L. Kember Bence Kotis YoSon Park Gina M. Peloso Shweta Ramdas Alexandra J. Scott Craig Smail Emily K. Tsang Seyedeh M. Zekavat Marcello Ziosi Aradhana Kristin Ardlie Themistocles L. Assimes Michael C. Bassik Christopher D. Brown Adolfo Correa Ira M. Hall Hae Kyung Im Xin Li Pradeep Natarajan Tuuli Lappalainen Pejman Mohammadi Stephen B. Montgomery Alexis Battle François Aguet Shankara Anand Kristin Ardlie Stacey Gabriel Gad Getz Aaron Graubert Kane Hadley Robert E. Handsaker Katherine Huang Seva Kashin Xiao Li Daniel G. MacArthur Samuel R. Meier Jared L. Nedzel Duyen T. Nguyen Ayellet V. Segrè Ellen Todres Brunilda Balliu Alvaro Barbeira Alexis Battle Rodrigo Bonazzola Andrew Brown Christopher D. Brown Stephane E. Castel Donald F. Conrad Daniel J. Cotter Nancy J. Cox Sayantan Das Olivia M. de Goede Emmanouil T. Dermitzakis Jonah Einson Barbara E. Engelhardt Eleazar Eskin Tiffany Eulalio Nicole M. Ferraro Elise D. Flynn Laure Frésard Eric R. Gamazon Diego Garrido-Martín Nicole R. Gay Michael J. Gloudemans Roderic Guigó Andrew R. Hame Yuan He Paul Hoffman Farhad Hormozdiari Lei Hou Hae Kyung Im Brian Jo Silva Kasela Manolis Kellis Sarah Kim-Hellmuth Alan Kwong Tuuli Lappalainen Xin Li Yanyu Liang Serghei Mangul Pejman Mohammadi Stephen B. Montgomery Manuel Muñoz-Aguirre Daniel Nachun Andrew B. Nobel Meritxell Oliva

Outliers in the human transcriptome reveal functional effects of rare genetic variants.

10.1126/science.aaz5900 article EN Science 2020-09-10

Premature menopause is an independent risk factor for cardiovascular disease in women, but mechanisms underlying this association remain unclear. Clonal hematopoiesis of indeterminate potential (CHIP), the age-related expansion hematopoietic cells with leukemogenic mutations without detectable malignancy, associated accelerated atherosclerosis. Whether premature CHIP unknown.We included postmenopausal women from UK Biobank (n=11 495) aged 40 to 70 years whole exome sequences and Women's...

10.1161/circulationaha.120.051775 article EN Circulation 2020-11-09

Nitric oxide signaling plays a key role in the regulation of vascular tone and platelet activation. Here, we seek to understand impact genetic predisposition enhanced nitric on risk for cardiovascular diseases, thus informing potential utility pharmacological stimulation pathway as therapeutic strategy.We analyzed association common rare variants 2 genes that mediate (Nitric Oxide Synthase 3 [NOS3] Guanylate Cyclase 1, Soluble, Alpha [GUCY1A3]) with range human phenotypes. We selected...

10.1161/circulationaha.117.028021 article EN Circulation 2017-10-06

Abstract Less than 3% of protein-coding genetic variants are predicted to result in loss protein function through the introduction a stop codon, frameshift, or disruption an essential splice site; however, such loss-of-function (pLOF) provide insight into effector transcript and direction biological effect. In &gt;400,000 UK Biobank participants, we conduct association analyses 3759 pLOF with six metabolic traits, cardiometabolic diseases, twelve additional diseases. We identified 18 new...

10.1038/s41467-018-03911-8 article EN cc-by Nature Communications 2018-04-18
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