Alain Ndayisaba

ORCID: 0000-0001-7611-7115
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About
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Research Areas
  • Parkinson's Disease Mechanisms and Treatments
  • Nuclear Receptors and Signaling
  • Neurological diseases and metabolism
  • Genetic Neurodegenerative Diseases
  • Neurological disorders and treatments
  • Molecular Biology Techniques and Applications
  • Cell Image Analysis Techniques
  • Medicinal Plants and Bioactive Compounds
  • Functional Brain Connectivity Studies
  • Neuroinflammation and Neurodegeneration Mechanisms
  • DNA Repair Mechanisms
  • Light effects on plants
  • Connective tissue disorders research
  • Amyotrophic Lateral Sclerosis Research
  • Multiple Sclerosis Research Studies
  • Aquatic life and conservation
  • Alzheimer's disease research and treatments
  • Brain Tumor Detection and Classification
  • Monoclonal and Polyclonal Antibodies Research
  • Coenzyme Q10 studies and effects
  • Protein Degradation and Inhibitors
  • CRISPR and Genetic Engineering
  • Advanced Biosensing Techniques and Applications
  • Protein Hydrolysis and Bioactive Peptides
  • Cytomegalovirus and herpesvirus research

Brigham and Women's Hospital
2022-2025

Harvard University
2022-2025

Innsbruck Medical University
2019-2024

Universität Innsbruck
2019-2024

American Parkinson Disease Association
2024

Research Network (United States)
2024

Riccardo Currò Natalia Dominik Stefano Facchini Elisa Vegezzi Roisin Sullivan and 95 more Valentina Galassi Deforie Gorka Fernández‐Eulate Andreas Traschütz Salvatore Rossi Matteo Garibaldi Mariusz Kwarciany Franco Taroni Alfredo Brusco Jean-Marc Good Francesca Cavalcanti Simon Hammans Gianina Ravenscroft Richard Roxburgh Inés Albájar Catherine Ashton Nick Beauchamp Sarah J. Beecroft Emilia Bellone José Berciano Petya Bogdanova‐Mihaylova Barbara Borroni Bernard Brais Enrico Bugiardini Catarina Falcão de Campos Aisling Carr Liam Carroll Francesca Castellani Tiziana Cavallaro Patrick F. Chinnery Silvia Colnaghi Giuseppe Cosentino Joana Damásio Soma Das Grazia Devigili Daniela Di Bella D J Dick Alexandra Dürr Amar El-Saddig Jennifer Faber Moreno Ferrarini Massimiliano Filosto Geraint Fuller Salvatore Gallone Chiara Gemelli Marina Grandis John Hardy Channa Hewamadduma Rita Horváth Vincent Huin Daniele Imperiale Pablo Iruzubieta Diego Kaski Andrew King Thomas Klockgether Müge Kovancılar Koç Kishore R. Kumar Thierry Küntzer Nigel G. Laing Matilde Laurá Timothy Lavin Peter Leigh Lea Leonardis Michael P. Lunn Stefania Magri Francesca Magrinelli Maria João Malaquias Michelangelo Mancuso Hadi Manji Sara Massucco John McConville Renato P. Munhoz Sara Nagy Alain Ndayisaba Andrea H. Németh Luiz Eduardo Novis Johanna Palmio Elena Pegoraro David Pellerin Benedetta Perrone Chiara Pisciotta James M. Polke Malcolm J. Proudfoot Laura Orsi Aleksandar Radunović Nilo Riva Aiko Robert Riccardo Ronco Elena Rossini Alexander M. Rossor Irmak Şahbaz Qais Sa’di Ettore Salsano Alessandro Salvalaggio Lucio Santoro Elisa Sarto

Abstract RFC1 disease, caused by biallelic repeat expansion in RFC1, is clinically heterogeneous terms of age onset, disease progression and phenotype. We investigated the role size influencing clinical variables disease. also assessed presence meiotic somatic instability repeat. In this study, we identified 553 patients carrying expansions measured 392 cases. Pearson’s coefficient was calculated to assess correlation between at onset. A Cox model with robust cluster standard errors adopted...

10.1093/brain/awad436 article EN cc-by Brain 2024-01-09
Ruth Chia Anindita Ray Zalak Shah Jinhui Ding Paola Ruffo and 95 more Masashi Fujita Vilas Menon Sara Sáez-Atiénzar Paolo Reho Karri Kaivola Ronald L. Walton Regina H. Reynolds Ramita Karra S.S.J. Sait Fulya Akçimen Mónica Díez-Fairén Ignacio Álvarez Alessandra Fanciulli Nadia Stefanova Klaus Seppi Susanne Duerr Fabian Leys Florian Krismer Victoria Sidoroff Alexander Zimprich Walter Pirker Olivier Rascol Alexandra Foubert‐Samier Wassilios G. Meissner François Tison Anne Pavy‐Le Traon Maria Teresa Pellecchia Paolo Barone Maria Claudia Russillo Juan Marín‐Lahoz Jaime Kulisevsky Soraya Torres Pablo Mir María Teresa Periñán Christos Proukakis Viorica Chelban Lesley Wu Yee Yen Goh Laura Parkkinen Joshua Shulman Christopher Kobylecki Jennifer A. Saxon Sara Rollinson Emily M. Garland Italo Biaggioni Irene Litvan Ileana Gabriela Sanchez Rubio Roy N. Alcalay Kimberly Kwei Steven Lubbe Qinwen Mao Margaret E. Flanagan Rudolph J. Castellani Vikram Khurana Alain Ndayisaba Andrea Calvo Gabriele Mora Antonio Canosa Gianluca Floris Ryan C. Bohannan Anni Moore Lucy Norcliffe‐Kaufmann Jose‐Alberto Palma Horacio Kaufmann Changyoun Kim Michiyo Iba Eliezer Masliah Ted M. Dawson Liana S. Rosenthal Alexander Pantelyat Marilyn S. Albert Olga Pletniková Juan C. Troncoso Jon Infante Carmen Lage Pascual Sánchez‐Juan Geidy E. Serrano Thomas G. Beach Pau Pástor Huw R. Morris Diego Albani Jordi Clarimón Gregor K. Wenning John Hardy Mina Ryten Eric Topol Ali Torkamani Adriano Chiò David A. Bennett Philip L. De Jager Philip Low Wolfgang Singer William P. Cheshire Zbigniew K. Wszołek Dennis W. Dickson

Highlights•Generation of a foundational genomic resource in multiple system atrophy•GWAS identifies novel risk loci at GAB1, lnc-LRRC49-3, TENM2, and RABGEF1•Functional genomics implicates USP38-DT, KCTD7, lnc-KCTD7-2 within these loci•Gene-burden analysis nominal enrichment rare missense mutations KCTD7SummaryMultiple atrophy (MSA) is an adult-onset, sporadic synucleinopathy characterized by parkinsonism, cerebellar ataxia, dysautonomia. The genetic architecture MSA poorly understood,...

10.1016/j.neuron.2024.04.002 article EN cc-by-nc-nd Neuron 2024-05-02

The heterogeneity of protein-rich inclusions and its significance in neurodegeneration is poorly understood. Standard patient-derived iPSC models develop neither reproducibly nor a reasonable time frame. Here, we developed screenable "inclusionopathy" utilizing piggyBac or targeted transgenes to rapidly induce CNS cells that express aggregation-prone proteins at brain-like levels. Inclusions their effects on cell survival were trackable single-inclusion resolution. Exemplar cortical neuron...

10.1016/j.neuron.2024.06.002 article EN cc-by Neuron 2024-07-29

The quantification and characterization of aggregated α-synuclein in clinical samples offer immense potential toward diagnosing, treating, better understanding neurodegenerative synucleinopathies. Here, we developed digital seed amplification assays to detect single aggregates by partitioning the reaction into microcompartments. Using pre-formed fibrils as seeds, measured aggregate concentrations low 4 pg/mL. To improve our sensitivity, captured on antibody-coated magnetic beads before...

10.1073/pnas.2312031121 article EN Proceedings of the National Academy of Sciences 2024-01-09

Alpha-synuclein (αSyn) protein levels correlate with the risk and severity of Parkinson’s disease related neurodegenerative diseases. Lowering αSyn is being actively investigated as a therapeutic modality. Here, we systematically map regulatory network that controls endogenous using sequential CRISPR-knockout -interference screens in an gene ( SNCA )–tagged cell line induced pluripotent stem cell–derived neurons (iNeurons). We uncover modifiers at multiple layers, amino-terminal...

10.1126/sciadv.adj4767 article EN cc-by-nc Science Advances 2024-02-09

Summary The pathological hallmark of neurodegenerative disease is the aberrant post-translational modification and aggregation proteins leading to formation insoluble protein inclusions. Genetic factors like APOE4 are known increase prevalence severity tau, amyloid, α-Synuclein However, human brain largely inaccessible during this process, limiting our mechanistic understanding. Here, we developed an iPSC-based 3D model that integrates neurons, glia, myelin, cerebrovascular cells into a...

10.1101/2025.02.09.637107 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2025-02-09

Cerebellar ataxia with neuropathy and vestibular areflexia syndrome (CANVAS) is a recessively inherited neurodegenerative disorder caused by intronic biallelic, nonreference CCCTT/AAGGG repeat expansions within RFC1 . To investigate how these repeats cause disease, we generated patient induced pluripotent stem cell–derived neurons (iNeurons). do not alter neuronal splicing, expression, or DNA repair pathway function. In reporter assays, AAGGG are translated into pentapeptide proteins....

10.1126/sciadv.adn2321 article EN cc-by-nc Science Advances 2024-09-04

ABSTRACT Intracellular inclusions accompanying neurodegeneration are histopathologically and ultrastructurally heterogeneous but the significance of this heterogeneity is unclear. iPSC models, while promising for disease modeling, do not form in a reasonable timeframe suffer from limited tractability. Here, we developed an toolbox utilizing piggyBac-based or targeted transgenes to rapidly induce CNS cells with concomitant expression aggregation-prone proteins. This system amenable screening...

10.1101/2022.11.08.515615 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-11-09

Abstract Multiple system atrophy (MSA) is a fatal neurodegenerative disease of unknown etiology characterized by widespread aggregation the protein alpha-synuclein in neurons and glia. Its orphan status, biological relationship to Parkinson’s (PD), rapid progression have sparked interest drug development. One significant obstacle therapeutics heterogeneity. Here, we share our process developing clinical trial-ready cohort MSA patients (69 2 years) within an outpatient setting, recruiting 20...

10.1007/s12311-022-01471-8 article EN cc-by The Cerebellum 2022-10-03

PFF seeding in U2OS cells

10.17504/protocols.io.q26g717bqgwz/v1 preprint EN 2024-08-28

Induced astrocyte differentiation

10.17504/protocols.io.kxygxy8pkl8j/v1 preprint EN 2024-08-28

Generation of preformed αS fibrils

10.17504/protocols.io.81wgbzo71gpk/v1 preprint EN 2024-08-28

Quantitative PCR for STMN2 expression in pi-N neurons

10.17504/protocols.io.261ge51oyg47/v1 preprint 2024-08-28

Seeded amplification assay (SAA) from neuronal cell lysates

10.17504/protocols.io.5jyl82xm7l2w/v1 preprint EN 2024-08-28

Stable integration of piggyBac plasmids into U2OS cells

10.17504/protocols.io.14egn618ql5d/v1 preprint EN 2024-08-28

Whole cell protein extraction and Western blotting

10.17504/protocols.io.rm7vzje8rlx1/v1 preprint EN 2024-08-28

Western blot of amplified fibrils after Proteinase K digestion

10.17504/protocols.io.j8nlk81e1l5r/v1 preprint EN 2024-08-28

Seeded amplification assay (SAA) from neuronal cell or postmortem brain lysates

10.17504/protocols.io.bp2l62enzgqe/v1 preprint EN 2024-08-28

PFF seeding in iPSC-derived cortical neurons_reformatted

10.17504/protocols.io.ewov19k87lr2/v1 preprint EN 2024-08-28
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